{"bundle_type":"pith_open_graph_bundle","bundle_version":"1.0","pith_number":"pith:2013:5HOKAACHJMLFMQRW57NJRUHMAV","short_pith_number":"pith:5HOKAACH","canonical_record":{"source":{"id":"1304.7342","kind":"arxiv","version":1},"metadata":{"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"physics.bio-ph","submitted_at":"2013-04-27T07:34:19Z","cross_cats_sorted":["cond-mat.stat-mech","q-bio.BM"],"title_canon_sha256":"3ccebdecc3e9d69dff40f49723dc93c8f58b7874c781f32f09884af693f84dcf","abstract_canon_sha256":"088465dea006cd8faa406f6a0ced5ed08e4622f7a6c0648ef495cb674d6f87ac"},"schema_version":"1.0"},"canonical_sha256":"e9dca000474b16564236efda98d0ec057677659d3705d949d8444c5c04406aba","source":{"kind":"arxiv","id":"1304.7342","version":1},"source_aliases":[{"alias_kind":"arxiv","alias_value":"1304.7342","created_at":"2026-05-18T01:50:21Z"},{"alias_kind":"arxiv_version","alias_value":"1304.7342v1","created_at":"2026-05-18T01:50:21Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.1304.7342","created_at":"2026-05-18T01:50:21Z"},{"alias_kind":"pith_short_12","alias_value":"5HOKAACHJMLF","created_at":"2026-05-18T12:27:34Z"},{"alias_kind":"pith_short_16","alias_value":"5HOKAACHJMLFMQRW","created_at":"2026-05-18T12:27:34Z"},{"alias_kind":"pith_short_8","alias_value":"5HOKAACH","created_at":"2026-05-18T12:27:34Z"}],"events":[{"event_type":"record_created","subject_pith_number":"pith:2013:5HOKAACHJMLFMQRW57NJRUHMAV","target":"record","payload":{"canonical_record":{"source":{"id":"1304.7342","kind":"arxiv","version":1},"metadata":{"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"physics.bio-ph","submitted_at":"2013-04-27T07:34:19Z","cross_cats_sorted":["cond-mat.stat-mech","q-bio.BM"],"title_canon_sha256":"3ccebdecc3e9d69dff40f49723dc93c8f58b7874c781f32f09884af693f84dcf","abstract_canon_sha256":"088465dea006cd8faa406f6a0ced5ed08e4622f7a6c0648ef495cb674d6f87ac"},"schema_version":"1.0"},"canonical_sha256":"e9dca000474b16564236efda98d0ec057677659d3705d949d8444c5c04406aba","receipt":{"kind":"pith_receipt","key_id":"pith-v1-2026-05","algorithm":"ed25519","signed_at":"2026-05-18T01:50:21.114535Z","signature_b64":"STwffq8Qkn5iTKlVTGN0Fi7P0CrjjwaAymAkuCx6yhcG68n1s99j4yyQkSxaTsbQMow0h9tkoxOoeViUt5vFCg==","signed_message":"canonical_sha256_bytes","builder_version":"pith-number-builder-2026-05-17-v1","receipt_version":"0.3","canonical_sha256":"e9dca000474b16564236efda98d0ec057677659d3705d949d8444c5c04406aba","last_reissued_at":"2026-05-18T01:50:21.113701Z","signature_status":"signed_v1","first_computed_at":"2026-05-18T01:50:21.113701Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"source_kind":"arxiv","source_id":"1304.7342","source_version":1,"attestation_state":"computed"},"signer":{"signer_id":"pith.science","signer_type":"pith_registry","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"created_at":"2026-05-18T01:50:21Z","supersedes":[],"prev_event":null,"signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"cQXBfpVQ/TuwH6Va9klFCu3438mkgRrsFfVrs+5Xk3OGjr8V/99y+4DC9xasCNwz0pBuPbHGfid8kizg0tIeBw==","signed_message":"open_graph_event_sha256_bytes","signed_at":"2026-06-25T17:47:57.609504Z"},"content_sha256":"2645107de9f989a035cf6388a72794920aec1e1187bdc058ce3a52aed980e9b7","schema_version":"1.0","event_id":"sha256:2645107de9f989a035cf6388a72794920aec1e1187bdc058ce3a52aed980e9b7"},{"event_type":"graph_snapshot","subject_pith_number":"pith:2013:5HOKAACHJMLFMQRW57NJRUHMAV","target":"graph","payload":{"graph_snapshot":{"paper":{"title":"Multiscale enhanced path sampling based on the Onsager-Machlup action: Application to a model polymer","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","headline":"","cross_cats":["cond-mat.stat-mech","q-bio.BM"],"primary_cat":"physics.bio-ph","authors_text":"Akinori Kidera, Hiroshi Fujisaki, Kei Moritsugu, Motoyuki Shiga","submitted_at":"2013-04-27T07:34:19Z","abstract_excerpt":"We propose a novel path sampling method based on the Onsager-Machlup (OM) action by generalizing the multiscale enhanced sampling (MSES) technique suggested by Moritsugu and coworkers (J. Chem. Phys. 133, 224105 (2010)). The basic idea of this method is that the system we want to study (for example, some molecular system described by molecular mechanics) is coupled to a coarse-grained (CG) system, which can move more quickly and computed more efficiently than the original system. We simulate this combined system (original + CG system) using (underdamped) Langevin dynamics where different heat "},"claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"1304.7342","kind":"arxiv","version":1},"verdict":{"id":null,"model_set":{},"created_at":null,"strongest_claim":"","one_line_summary":"","pipeline_version":null,"weakest_assumption":"","pith_extraction_headline":""},"references":{"count":0,"sample":[],"resolved_work":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","internal_anchors":0},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"author_claims":{"count":0,"strong_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"builder_version":"pith-number-builder-2026-05-17-v1"},"verdict_id":null},"signer":{"signer_id":"pith.science","signer_type":"pith_registry","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"created_at":"2026-05-18T01:50:21Z","supersedes":[],"prev_event":null,"signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"oVooKypYOdvvtXzdlZExa91S/MNNofKve963kDMmEF1cWTAbrdeX+a3F0It26ZLkELizjTLMhzlBOZ+OT91ADA==","signed_message":"open_graph_event_sha256_bytes","signed_at":"2026-06-25T17:47:57.609859Z"},"content_sha256":"f018e5f657499fd4738dc00ca1df1be72bacbb42114f61cb11400c5d0a0e5120","schema_version":"1.0","event_id":"sha256:f018e5f657499fd4738dc00ca1df1be72bacbb42114f61cb11400c5d0a0e5120"}],"timestamp_proofs":[],"mirror_hints":[{"mirror_type":"https","name":"Pith Resolver","base_url":"https://pith.science","bundle_url":"https://pith.science/pith/5HOKAACHJMLFMQRW57NJRUHMAV/bundle.json","state_url":"https://pith.science/pith/5HOKAACHJMLFMQRW57NJRUHMAV/state.json","well_known_bundle_url":"https://pith.science/.well-known/pith/5HOKAACHJMLFMQRW57NJRUHMAV/bundle.json","status":"primary"}],"public_keys":[{"key_id":"pith-v1-2026-05","algorithm":"ed25519","format":"raw","public_key_b64":"stVStoiQhXFxp4s2pdzPNoqVNBMojDU/fJ2db5S3CbM=","public_key_hex":"b2d552b68890857171a78b36a5dccf368a953413288c353f7c9d9d6f94b709b3","fingerprint_sha256_b32_first128bits":"RVFV5Z2OI2J3ZUO7ERDEBCYNKS","fingerprint_sha256_hex":"8d4b5ee74e4693bcd1df2446408b0d54","rotates_at":null,"url":"https://pith.science/pith-signing-key.json","notes":"Pith uses this Ed25519 key to sign canonical record SHA-256 digests. Verify with: ed25519_verify(public_key, message=canonical_sha256_bytes, signature=base64decode(signature_b64))."}],"merge_version":"pith-open-graph-merge-v1","built_at":"2026-06-25T17:47:57Z","links":{"resolver":"https://pith.science/pith/5HOKAACHJMLFMQRW57NJRUHMAV","bundle":"https://pith.science/pith/5HOKAACHJMLFMQRW57NJRUHMAV/bundle.json","state":"https://pith.science/pith/5HOKAACHJMLFMQRW57NJRUHMAV/state.json","well_known_bundle":"https://pith.science/.well-known/pith/5HOKAACHJMLFMQRW57NJRUHMAV/bundle.json"},"state":{"state_type":"pith_open_graph_state","state_version":"1.0","pith_number":"pith:2013:5HOKAACHJMLFMQRW57NJRUHMAV","merge_version":"pith-open-graph-merge-v1","event_count":2,"valid_event_count":2,"invalid_event_count":0,"equivocation_count":0,"current":{"canonical_record":{"metadata":{"abstract_canon_sha256":"088465dea006cd8faa406f6a0ced5ed08e4622f7a6c0648ef495cb674d6f87ac","cross_cats_sorted":["cond-mat.stat-mech","q-bio.BM"],"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"physics.bio-ph","submitted_at":"2013-04-27T07:34:19Z","title_canon_sha256":"3ccebdecc3e9d69dff40f49723dc93c8f58b7874c781f32f09884af693f84dcf"},"schema_version":"1.0","source":{"id":"1304.7342","kind":"arxiv","version":1}},"source_aliases":[{"alias_kind":"arxiv","alias_value":"1304.7342","created_at":"2026-05-18T01:50:21Z"},{"alias_kind":"arxiv_version","alias_value":"1304.7342v1","created_at":"2026-05-18T01:50:21Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.1304.7342","created_at":"2026-05-18T01:50:21Z"},{"alias_kind":"pith_short_12","alias_value":"5HOKAACHJMLF","created_at":"2026-05-18T12:27:34Z"},{"alias_kind":"pith_short_16","alias_value":"5HOKAACHJMLFMQRW","created_at":"2026-05-18T12:27:34Z"},{"alias_kind":"pith_short_8","alias_value":"5HOKAACH","created_at":"2026-05-18T12:27:34Z"}],"graph_snapshots":[{"event_id":"sha256:f018e5f657499fd4738dc00ca1df1be72bacbb42114f61cb11400c5d0a0e5120","target":"graph","created_at":"2026-05-18T01:50:21Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"graph_snapshot":{"author_claims":{"count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","strong_count":0},"builder_version":"pith-number-builder-2026-05-17-v1","claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"paper":{"abstract_excerpt":"We propose a novel path sampling method based on the Onsager-Machlup (OM) action by generalizing the multiscale enhanced sampling (MSES) technique suggested by Moritsugu and coworkers (J. Chem. Phys. 133, 224105 (2010)). The basic idea of this method is that the system we want to study (for example, some molecular system described by molecular mechanics) is coupled to a coarse-grained (CG) system, which can move more quickly and computed more efficiently than the original system. We simulate this combined system (original + CG system) using (underdamped) Langevin dynamics where different heat ","authors_text":"Akinori Kidera, Hiroshi Fujisaki, Kei Moritsugu, Motoyuki Shiga","cross_cats":["cond-mat.stat-mech","q-bio.BM"],"headline":"","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"physics.bio-ph","submitted_at":"2013-04-27T07:34:19Z","title":"Multiscale enhanced path sampling based on the Onsager-Machlup action: Application to a model polymer"},"references":{"count":0,"internal_anchors":0,"resolved_work":0,"sample":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"1304.7342","kind":"arxiv","version":1},"verdict":{"created_at":null,"id":null,"model_set":{},"one_line_summary":"","pipeline_version":null,"pith_extraction_headline":"","strongest_claim":"","weakest_assumption":""}},"verdict_id":null}}],"author_attestations":[],"timestamp_anchors":[],"storage_attestations":[],"citation_signatures":[],"replication_records":[],"corrections":[],"mirror_hints":[],"record_created":{"event_id":"sha256:2645107de9f989a035cf6388a72794920aec1e1187bdc058ce3a52aed980e9b7","target":"record","created_at":"2026-05-18T01:50:21Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"attestation_state":"computed","canonical_record":{"metadata":{"abstract_canon_sha256":"088465dea006cd8faa406f6a0ced5ed08e4622f7a6c0648ef495cb674d6f87ac","cross_cats_sorted":["cond-mat.stat-mech","q-bio.BM"],"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"physics.bio-ph","submitted_at":"2013-04-27T07:34:19Z","title_canon_sha256":"3ccebdecc3e9d69dff40f49723dc93c8f58b7874c781f32f09884af693f84dcf"},"schema_version":"1.0","source":{"id":"1304.7342","kind":"arxiv","version":1}},"canonical_sha256":"e9dca000474b16564236efda98d0ec057677659d3705d949d8444c5c04406aba","receipt":{"algorithm":"ed25519","builder_version":"pith-number-builder-2026-05-17-v1","canonical_sha256":"e9dca000474b16564236efda98d0ec057677659d3705d949d8444c5c04406aba","first_computed_at":"2026-05-18T01:50:21.113701Z","key_id":"pith-v1-2026-05","kind":"pith_receipt","last_reissued_at":"2026-05-18T01:50:21.113701Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","receipt_version":"0.3","signature_b64":"STwffq8Qkn5iTKlVTGN0Fi7P0CrjjwaAymAkuCx6yhcG68n1s99j4yyQkSxaTsbQMow0h9tkoxOoeViUt5vFCg==","signature_status":"signed_v1","signed_at":"2026-05-18T01:50:21.114535Z","signed_message":"canonical_sha256_bytes"},"source_id":"1304.7342","source_kind":"arxiv","source_version":1}}},"equivocations":[],"invalid_events":[],"applied_event_ids":["sha256:2645107de9f989a035cf6388a72794920aec1e1187bdc058ce3a52aed980e9b7","sha256:f018e5f657499fd4738dc00ca1df1be72bacbb42114f61cb11400c5d0a0e5120"],"state_sha256":"f29a8d79a8622b93d71450cc892f898227d744912b27b896902fac79f5220e37"},"bundle_signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"dJjAFsYs2kt9PhwcXWyfsYbM+CEjI0RZ88pbKYbz0cwmX9Q0xjhPqxN27E0+usOD5/m7Ut9gFuI6OAoRVUUrAg==","signed_message":"bundle_sha256_bytes","signed_at":"2026-06-25T17:47:57.611914Z","bundle_sha256":"3dfe9a55dfd0d1194f62274a93d16343ec38be05f2c10ba026221ec3a177ff62"}}