{"state_type":"pith_open_graph_state","state_version":"1.0","pith_number":"pith:2014:FMMBLNG2NHI5E7B632XJYDWGFY","merge_version":"pith-open-graph-merge-v1","event_count":2,"valid_event_count":2,"invalid_event_count":0,"equivocation_count":0,"current":{"canonical_record":{"metadata":{"abstract_canon_sha256":"5f7f1201fe7d596673fa4cc6cb614e32ffe94cb5bb47d954810f1a7a1045cde0","cross_cats_sorted":[],"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"q-bio.PE","submitted_at":"2014-01-09T14:31:09Z","title_canon_sha256":"a44415ade1f33d998c1419b738660c188c2ee8545bbe0e6ab20ebac7f8ebc04e"},"schema_version":"1.0","source":{"id":"1401.2016","kind":"arxiv","version":2}},"source_aliases":[{"alias_kind":"arxiv","alias_value":"1401.2016","created_at":"2026-05-18T02:51:41Z"},{"alias_kind":"arxiv_version","alias_value":"1401.2016v2","created_at":"2026-05-18T02:51:41Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.1401.2016","created_at":"2026-05-18T02:51:41Z"},{"alias_kind":"pith_short_12","alias_value":"FMMBLNG2NHI5","created_at":"2026-05-18T12:28:28Z"},{"alias_kind":"pith_short_16","alias_value":"FMMBLNG2NHI5E7B6","created_at":"2026-05-18T12:28:28Z"},{"alias_kind":"pith_short_8","alias_value":"FMMBLNG2","created_at":"2026-05-18T12:28:28Z"}],"graph_snapshots":[{"event_id":"sha256:2c596fc4f5a5c0badbac0375457e9a94e777713f7adb48ce7e11c641742f1478","target":"graph","created_at":"2026-05-18T02:51:41Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"graph_snapshot":{"author_claims":{"count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","strong_count":0},"builder_version":"pith-number-builder-2026-05-17-v1","claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"paper":{"abstract_excerpt":"Summary: Genotype networks are a method used in systems biology to study the innovability of a given phenotype, determining whether the phenotype is robust to mutations, and how do the genotypes associated to it are distributed in the genotype space. Here we developed VCF2Networks, a tool to apply this method to population genetics data, and in particular to single Nucleotide Variants data encoded in the Variant Call file Format (VCF). A complete summary of the properties of the genotype network that can be calculated by VCF2Networks is given in the Supplementary Materials 1.\n  Availability an","authors_text":"Ali R. Vahdati, Bertranpetit Jaume, Giovanni Marco Dall'Olio, Laayouni Hafid, Wagner Andreas","cross_cats":[],"headline":"","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"q-bio.PE","submitted_at":"2014-01-09T14:31:09Z","title":"VCF2Networks: applying Genotype Networks to Single Nucleotide Variants data"},"references":{"count":0,"internal_anchors":0,"resolved_work":0,"sample":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"1401.2016","kind":"arxiv","version":2},"verdict":{"created_at":null,"id":null,"model_set":{},"one_line_summary":"","pipeline_version":null,"pith_extraction_headline":"","strongest_claim":"","weakest_assumption":""}},"verdict_id":null}}],"author_attestations":[],"timestamp_anchors":[],"storage_attestations":[],"citation_signatures":[],"replication_records":[],"corrections":[],"mirror_hints":[],"record_created":{"event_id":"sha256:9d51f725eeb4d618abf91d2da51e5527e95ce77d5820a78f80f171b8ba4ab185","target":"record","created_at":"2026-05-18T02:51:41Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"attestation_state":"computed","canonical_record":{"metadata":{"abstract_canon_sha256":"5f7f1201fe7d596673fa4cc6cb614e32ffe94cb5bb47d954810f1a7a1045cde0","cross_cats_sorted":[],"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"q-bio.PE","submitted_at":"2014-01-09T14:31:09Z","title_canon_sha256":"a44415ade1f33d998c1419b738660c188c2ee8545bbe0e6ab20ebac7f8ebc04e"},"schema_version":"1.0","source":{"id":"1401.2016","kind":"arxiv","version":2}},"canonical_sha256":"2b1815b4da69d1d27c3edeae9c0ec62e1e3665847fc36acdda82d5df4c0cf493","receipt":{"algorithm":"ed25519","builder_version":"pith-number-builder-2026-05-17-v1","canonical_sha256":"2b1815b4da69d1d27c3edeae9c0ec62e1e3665847fc36acdda82d5df4c0cf493","first_computed_at":"2026-05-18T02:51:41.778503Z","key_id":"pith-v1-2026-05","kind":"pith_receipt","last_reissued_at":"2026-05-18T02:51:41.778503Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","receipt_version":"0.3","signature_b64":"CCcEeiWFoYw/q+Q74ZL/MiIJF02EcDvCPElpIG06zKQ87hxu7U9hrZQ/k4k4kjDXuOkzxaATrHxNO3/W73nuCQ==","signature_status":"signed_v1","signed_at":"2026-05-18T02:51:41.779031Z","signed_message":"canonical_sha256_bytes"},"source_id":"1401.2016","source_kind":"arxiv","source_version":2}}},"equivocations":[],"invalid_events":[],"applied_event_ids":["sha256:9d51f725eeb4d618abf91d2da51e5527e95ce77d5820a78f80f171b8ba4ab185","sha256:2c596fc4f5a5c0badbac0375457e9a94e777713f7adb48ce7e11c641742f1478"],"state_sha256":"84960c37ddfdb7bf31ab89157511e78140c80eefa4576c411a8fb124eaa846e2"}