{"state_type":"pith_open_graph_state","state_version":"1.0","pith_number":"pith:2024:O2CHR5G3DIXLBP35MHEH5U6AC4","merge_version":"pith-open-graph-merge-v1","event_count":2,"valid_event_count":2,"invalid_event_count":0,"equivocation_count":0,"current":{"canonical_record":{"metadata":{"abstract_canon_sha256":"1d0b55f543bbd423e666c22397b20845ac484c4a3c4d81faccbe2c90fa3e8eed","cross_cats_sorted":["cs.AI","cs.LO"],"license":"http://creativecommons.org/licenses/by/4.0/","primary_cat":"q-bio.OT","submitted_at":"2024-12-31T02:34:49Z","title_canon_sha256":"9e3d1289222276c87b2fd895e0987827939727761246ae942729be7771c1b478"},"schema_version":"1.0","source":{"id":"2501.01454","kind":"arxiv","version":3}},"source_aliases":[{"alias_kind":"arxiv","alias_value":"2501.01454","created_at":"2026-07-05T10:53:50Z"},{"alias_kind":"arxiv_version","alias_value":"2501.01454v3","created_at":"2026-07-05T10:53:50Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.2501.01454","created_at":"2026-07-05T10:53:50Z"},{"alias_kind":"pith_short_12","alias_value":"O2CHR5G3DIXL","created_at":"2026-07-05T10:53:50Z"},{"alias_kind":"pith_short_16","alias_value":"O2CHR5G3DIXLBP35","created_at":"2026-07-05T10:53:50Z"},{"alias_kind":"pith_short_8","alias_value":"O2CHR5G3","created_at":"2026-07-05T10:53:50Z"}],"graph_snapshots":[{"event_id":"sha256:be9b13f309d6aa89f267761d21a46d2f1eae0fd88e4724fa37737ceafae99b40","target":"graph","created_at":"2026-07-05T10:53:50Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"graph_snapshot":{"author_claims":{"count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","strong_count":0},"builder_version":"pith-number-builder-2026-05-17-v1","claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"integrity":{"available":true,"clean":true,"detectors_run":[],"endpoint":"/pith/2501.01454/integrity.json","findings":[],"snapshot_sha256":"c28c3603d3b5d939e8dc4c7e95fa8dfce3d595e45f758748cecf8e644a296938","summary":{"advisory":0,"by_detector":{},"critical":0,"informational":0}},"paper":{"abstract_excerpt":"Infectious diseases remain a critical global health challenge, and the integration of standardized ontologies plays a vital role in managing related data. The Infectious Disease Ontology (IDO) and its extensions, such as the Coronavirus Infectious Disease Ontology (CIDO), are essential for organizing and disseminating information related to infectious diseases. The COVID-19 pandemic highlighted the need for updating IDO and its virus-specific extensions. There is an additional need to update IDO extensions specific to bacteria, fungus, and parasite infectious diseases. We adopt the \"hub and sp","authors_text":"Alexander D. Diehl, Anthony Huffman, Carter Benson, Giacomo De Colle, John Beverley, Joshua Billig, Ram A.N.R. Challa, Ray Mavrovich, Shane Babcock, Sydney Cohen, Yongqun He","cross_cats":["cs.AI","cs.LO"],"headline":"","license":"http://creativecommons.org/licenses/by/4.0/","primary_cat":"q-bio.OT","submitted_at":"2024-12-31T02:34:49Z","title":"A Fourfold Pathogen Reference Ontology Suite"},"references":{"count":0,"internal_anchors":0,"resolved_work":0,"sample":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"2501.01454","kind":"arxiv","version":3},"verdict":{"created_at":null,"id":null,"model_set":{},"one_line_summary":"","pipeline_version":null,"pith_extraction_headline":"","strongest_claim":"","weakest_assumption":""}},"verdict_id":null}}],"author_attestations":[],"timestamp_anchors":[],"storage_attestations":[],"citation_signatures":[],"replication_records":[],"corrections":[],"mirror_hints":[],"record_created":{"event_id":"sha256:ce354d0d60f8639cd87ba7f14cd7f02e7dccc271266ab371d63e44893df3393f","target":"record","created_at":"2026-07-05T10:53:50Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"attestation_state":"computed","canonical_record":{"metadata":{"abstract_canon_sha256":"1d0b55f543bbd423e666c22397b20845ac484c4a3c4d81faccbe2c90fa3e8eed","cross_cats_sorted":["cs.AI","cs.LO"],"license":"http://creativecommons.org/licenses/by/4.0/","primary_cat":"q-bio.OT","submitted_at":"2024-12-31T02:34:49Z","title_canon_sha256":"9e3d1289222276c87b2fd895e0987827939727761246ae942729be7771c1b478"},"schema_version":"1.0","source":{"id":"2501.01454","kind":"arxiv","version":3}},"canonical_sha256":"768478f4db1a2eb0bf7d61c87ed3c017221a6a9719f49df13b2105b8f37e3dfa","receipt":{"algorithm":"ed25519","builder_version":"pith-number-builder-2026-05-17-v1","canonical_sha256":"768478f4db1a2eb0bf7d61c87ed3c017221a6a9719f49df13b2105b8f37e3dfa","first_computed_at":"2026-07-05T10:53:50.830445Z","key_id":"pith-v1-2026-05","kind":"pith_receipt","last_reissued_at":"2026-07-05T10:53:50.830445Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","receipt_version":"0.3","signature_b64":"YGiQns0HC4GW4415sWRmdtUEh1KRO1RA0jB/vyyxm/XKnRTgVlawGxkqTZh9ccewRX+8fXkqWI3a7gdIlCtNDg==","signature_status":"signed_v1","signed_at":"2026-07-05T10:53:50.831042Z","signed_message":"canonical_sha256_bytes"},"source_id":"2501.01454","source_kind":"arxiv","source_version":3}}},"equivocations":[],"invalid_events":[],"applied_event_ids":["sha256:ce354d0d60f8639cd87ba7f14cd7f02e7dccc271266ab371d63e44893df3393f","sha256:be9b13f309d6aa89f267761d21a46d2f1eae0fd88e4724fa37737ceafae99b40"],"state_sha256":"20cbef80ae349243f850a3da3c38426d5f02509674a7fbf6f84a965549ebcc5a"}