{"record_type":"pith_number_record","schema_url":"https://pith.science/schemas/pith-number/v1.json","pith_number":"pith:2014:PVBSH35SXY7UB5XQZ6VKJTH7TI","short_pith_number":"pith:PVBSH35S","schema_version":"1.0","canonical_sha256":"7d4323efb2be3f40f6f0cfaaa4ccff9a2f9543ef5137c211f53efb1dbd61cdf9","source":{"kind":"arxiv","id":"1407.4824","version":1},"attestation_state":"computed","paper":{"title":"Fair Evaluation of Global Network Aligners","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","headline":"","cross_cats":[],"primary_cat":"q-bio.MN","authors_text":"Joseph Crawford, Tijana Milenkovi\\'c, Yihan Sun","submitted_at":"2014-07-17T20:23:00Z","abstract_excerpt":"Biological network alignment identifies topologically and functionally conserved regions between networks of different species. It encompasses two algorithmic steps: node cost function (NCF), which measures similarities between nodes in different networks, and alignment strategy (AS), which uses these similarities to rapidly identify high-scoring alignments. Different methods use both different NCFs and different ASs. Thus, it is unclear whether the superiority of a method comes from its NCF, its AS, or both. We already showed on MI-GRAAL and IsoRankN that combining NCF of one method and AS of"},"verification_status":{"content_addressed":true,"pith_receipt":true,"author_attested":false,"weak_author_claims":0,"strong_author_claims":0,"externally_anchored":false,"storage_verified":false,"citation_signatures":0,"replication_records":0,"graph_snapshot":true,"references_resolved":false,"formal_links_present":false},"canonical_record":{"source":{"id":"1407.4824","kind":"arxiv","version":1},"metadata":{"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"q-bio.MN","submitted_at":"2014-07-17T20:23:00Z","cross_cats_sorted":[],"title_canon_sha256":"314381c31279ae38a490783fbd24624fa3f41dc27073827f60c5bb86a77294b8","abstract_canon_sha256":"f207a2d9b067f1974d1b1fb3fab11cfb37b9c5caebc0e831c92c84318f7366fd"},"schema_version":"1.0"},"receipt":{"kind":"pith_receipt","key_id":"pith-v1-2026-05","algorithm":"ed25519","signed_at":"2026-05-18T02:47:22.625729Z","signature_b64":"w6VuA9BXzSFD3fucB+PnJC6KsQXT4YS+o16EDiWY4TI/zHZ9GfO7kwZ/kM8cEvF1QXkwJcTK3KmVhvRs4cmvAA==","signed_message":"canonical_sha256_bytes","builder_version":"pith-number-builder-2026-05-17-v1","receipt_version":"0.3","canonical_sha256":"7d4323efb2be3f40f6f0cfaaa4ccff9a2f9543ef5137c211f53efb1dbd61cdf9","last_reissued_at":"2026-05-18T02:47:22.625205Z","signature_status":"signed_v1","first_computed_at":"2026-05-18T02:47:22.625205Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"graph_snapshot":{"paper":{"title":"Fair Evaluation of Global Network Aligners","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","headline":"","cross_cats":[],"primary_cat":"q-bio.MN","authors_text":"Joseph Crawford, Tijana Milenkovi\\'c, Yihan Sun","submitted_at":"2014-07-17T20:23:00Z","abstract_excerpt":"Biological network alignment identifies topologically and functionally conserved regions between networks of different species. It encompasses two algorithmic steps: node cost function (NCF), which measures similarities between nodes in different networks, and alignment strategy (AS), which uses these similarities to rapidly identify high-scoring alignments. Different methods use both different NCFs and different ASs. Thus, it is unclear whether the superiority of a method comes from its NCF, its AS, or both. We already showed on MI-GRAAL and IsoRankN that combining NCF of one method and AS of"},"claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"1407.4824","kind":"arxiv","version":1},"verdict":{"id":null,"model_set":{},"created_at":null,"strongest_claim":"","one_line_summary":"","pipeline_version":null,"weakest_assumption":"","pith_extraction_headline":""},"references":{"count":0,"sample":[],"resolved_work":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","internal_anchors":0},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"author_claims":{"count":0,"strong_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"builder_version":"pith-number-builder-2026-05-17-v1"},"aliases":[{"alias_kind":"arxiv","alias_value":"1407.4824","created_at":"2026-05-18T02:47:22.625281+00:00"},{"alias_kind":"arxiv_version","alias_value":"1407.4824v1","created_at":"2026-05-18T02:47:22.625281+00:00"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.1407.4824","created_at":"2026-05-18T02:47:22.625281+00:00"},{"alias_kind":"pith_short_12","alias_value":"PVBSH35SXY7U","created_at":"2026-05-18T12:28:43.426989+00:00"},{"alias_kind":"pith_short_16","alias_value":"PVBSH35SXY7UB5XQ","created_at":"2026-05-18T12:28:43.426989+00:00"},{"alias_kind":"pith_short_8","alias_value":"PVBSH35S","created_at":"2026-05-18T12:28:43.426989+00:00"}],"events":[],"event_summary":{},"paper_claims":[],"inbound_citations":{"count":0,"internal_anchor_count":0,"sample":[]},"formal_canon":{"evidence_count":0,"sample":[],"anchors":[]},"links":{"html":"https://pith.science/pith/PVBSH35SXY7UB5XQZ6VKJTH7TI","json":"https://pith.science/pith/PVBSH35SXY7UB5XQZ6VKJTH7TI.json","graph_json":"https://pith.science/api/pith-number/PVBSH35SXY7UB5XQZ6VKJTH7TI/graph.json","events_json":"https://pith.science/api/pith-number/PVBSH35SXY7UB5XQZ6VKJTH7TI/events.json","paper":"https://pith.science/paper/PVBSH35S"},"agent_actions":{"view_html":"https://pith.science/pith/PVBSH35SXY7UB5XQZ6VKJTH7TI","download_json":"https://pith.science/pith/PVBSH35SXY7UB5XQZ6VKJTH7TI.json","view_paper":"https://pith.science/paper/PVBSH35S","resolve_alias":"https://pith.science/api/pith-number/resolve?arxiv=1407.4824&json=true","fetch_graph":"https://pith.science/api/pith-number/PVBSH35SXY7UB5XQZ6VKJTH7TI/graph.json","fetch_events":"https://pith.science/api/pith-number/PVBSH35SXY7UB5XQZ6VKJTH7TI/events.json","actions":{"anchor_timestamp":"https://pith.science/pith/PVBSH35SXY7UB5XQZ6VKJTH7TI/action/timestamp_anchor","attest_storage":"https://pith.science/pith/PVBSH35SXY7UB5XQZ6VKJTH7TI/action/storage_attestation","attest_author":"https://pith.science/pith/PVBSH35SXY7UB5XQZ6VKJTH7TI/action/author_attestation","sign_citation":"https://pith.science/pith/PVBSH35SXY7UB5XQZ6VKJTH7TI/action/citation_signature","submit_replication":"https://pith.science/pith/PVBSH35SXY7UB5XQZ6VKJTH7TI/action/replication_record"}},"created_at":"2026-05-18T02:47:22.625281+00:00","updated_at":"2026-05-18T02:47:22.625281+00:00"}