{"record_type":"pith_number_record","schema_url":"https://pith.science/schemas/pith-number/v1.json","pith_number":"pith:2007:UQTOW7GZPKKOJ6TK3UW5RBU62E","short_pith_number":"pith:UQTOW7GZ","schema_version":"1.0","canonical_sha256":"a426eb7cd97a94e4fa6add2dd8869ed11f50b8aa5cdc5bf65c29c88774be9b1a","source":{"kind":"arxiv","id":"0711.2723","version":1},"attestation_state":"computed","paper":{"title":"Assortative mixing in Protein Contact Networks and protein folding kinetics","license":"","headline":"","cross_cats":["q-bio.BM"],"primary_cat":"q-bio.MN","authors_text":"Ganesh Bagler, Somdatta Sinha","submitted_at":"2007-11-17T08:45:23Z","abstract_excerpt":"Starting from linear chains of amino acids, the spontaneous folding of proteins into their elaborate three-dimensional structures is one of the remarkable examples of biological self-organization. We investigated native state structures of 30 single-domain, two-state proteins, from complex networks perspective, to understand the role of topological parameters in proteins' folding kinetics, at two length scales-- as ``Protein Contact Networks (PCNs)'' and their corresponding ``Long-range Interaction Networks (LINs)'' constructed by ignoring the short-range interactions. Our results show that, b"},"verification_status":{"content_addressed":true,"pith_receipt":true,"author_attested":false,"weak_author_claims":0,"strong_author_claims":0,"externally_anchored":false,"storage_verified":false,"citation_signatures":0,"replication_records":0,"graph_snapshot":true,"references_resolved":false,"formal_links_present":false},"canonical_record":{"source":{"id":"0711.2723","kind":"arxiv","version":1},"metadata":{"license":"","primary_cat":"q-bio.MN","submitted_at":"2007-11-17T08:45:23Z","cross_cats_sorted":["q-bio.BM"],"title_canon_sha256":"d7f5a15333745875a3d9df3949bda69cf6203d244935390a7c3e393b2092d4d2","abstract_canon_sha256":"8cb734759c789c280ea699b71ef65d99e9eab29c933feda0ded3aa2cda22a656"},"schema_version":"1.0"},"receipt":{"kind":"pith_receipt","key_id":"pith-v1-2026-05","algorithm":"ed25519","signed_at":"2026-07-04T15:05:42.053272Z","signature_b64":"+07Tcjs2Iuyaq2YxnFtsdKKTIG7ctgBgT4Ebie/DWzIDpzpgePypbuA10A6txoPjayNg0haOCyDLVUnxaHbCAQ==","signed_message":"canonical_sha256_bytes","builder_version":"pith-number-builder-2026-05-17-v1","receipt_version":"0.3","canonical_sha256":"a426eb7cd97a94e4fa6add2dd8869ed11f50b8aa5cdc5bf65c29c88774be9b1a","last_reissued_at":"2026-07-04T15:05:42.052908Z","signature_status":"signed_v1","first_computed_at":"2026-07-04T15:05:42.052908Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"graph_snapshot":{"paper":{"title":"Assortative mixing in Protein Contact Networks and protein folding kinetics","license":"","headline":"","cross_cats":["q-bio.BM"],"primary_cat":"q-bio.MN","authors_text":"Ganesh Bagler, Somdatta Sinha","submitted_at":"2007-11-17T08:45:23Z","abstract_excerpt":"Starting from linear chains of amino acids, the spontaneous folding of proteins into their elaborate three-dimensional structures is one of the remarkable examples of biological self-organization. We investigated native state structures of 30 single-domain, two-state proteins, from complex networks perspective, to understand the role of topological parameters in proteins' folding kinetics, at two length scales-- as ``Protein Contact Networks (PCNs)'' and their corresponding ``Long-range Interaction Networks (LINs)'' constructed by ignoring the short-range interactions. Our results show that, b"},"claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"0711.2723","kind":"arxiv","version":1},"verdict":{"id":null,"model_set":{},"created_at":null,"strongest_claim":"","one_line_summary":"","pipeline_version":null,"weakest_assumption":"","pith_extraction_headline":""},"integrity":{"clean":true,"summary":{"advisory":0,"critical":0,"by_detector":{},"informational":0},"endpoint":"/pith/0711.2723/integrity.json","findings":[],"available":true,"detectors_run":[],"snapshot_sha256":"c28c3603d3b5d939e8dc4c7e95fa8dfce3d595e45f758748cecf8e644a296938"},"references":{"count":0,"sample":[],"resolved_work":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","internal_anchors":0},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"author_claims":{"count":0,"strong_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"builder_version":"pith-number-builder-2026-05-17-v1"},"aliases":[{"alias_kind":"arxiv","alias_value":"0711.2723","created_at":"2026-07-04T15:05:42.052971+00:00"},{"alias_kind":"arxiv_version","alias_value":"0711.2723v1","created_at":"2026-07-04T15:05:42.052971+00:00"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.0711.2723","created_at":"2026-07-04T15:05:42.052971+00:00"},{"alias_kind":"pith_short_12","alias_value":"UQTOW7GZPKKO","created_at":"2026-07-04T15:05:42.052971+00:00"},{"alias_kind":"pith_short_16","alias_value":"UQTOW7GZPKKOJ6TK","created_at":"2026-07-04T15:05:42.052971+00:00"},{"alias_kind":"pith_short_8","alias_value":"UQTOW7GZ","created_at":"2026-07-04T15:05:42.052971+00:00"}],"events":[],"event_summary":{},"paper_claims":[],"inbound_citations":{"count":0,"internal_anchor_count":0,"sample":[]},"formal_canon":{"evidence_count":0,"sample":[],"anchors":[]},"links":{"html":"https://pith.science/pith/UQTOW7GZPKKOJ6TK3UW5RBU62E","json":"https://pith.science/pith/UQTOW7GZPKKOJ6TK3UW5RBU62E.json","graph_json":"https://pith.science/api/pith-number/UQTOW7GZPKKOJ6TK3UW5RBU62E/graph.json","events_json":"https://pith.science/api/pith-number/UQTOW7GZPKKOJ6TK3UW5RBU62E/events.json","paper":"https://pith.science/paper/UQTOW7GZ"},"agent_actions":{"view_html":"https://pith.science/pith/UQTOW7GZPKKOJ6TK3UW5RBU62E","download_json":"https://pith.science/pith/UQTOW7GZPKKOJ6TK3UW5RBU62E.json","view_paper":"https://pith.science/paper/UQTOW7GZ","resolve_alias":"https://pith.science/api/pith-number/resolve?arxiv=0711.2723&json=true","fetch_graph":"https://pith.science/api/pith-number/UQTOW7GZPKKOJ6TK3UW5RBU62E/graph.json","fetch_events":"https://pith.science/api/pith-number/UQTOW7GZPKKOJ6TK3UW5RBU62E/events.json","actions":{"anchor_timestamp":"https://pith.science/pith/UQTOW7GZPKKOJ6TK3UW5RBU62E/action/timestamp_anchor","attest_storage":"https://pith.science/pith/UQTOW7GZPKKOJ6TK3UW5RBU62E/action/storage_attestation","attest_author":"https://pith.science/pith/UQTOW7GZPKKOJ6TK3UW5RBU62E/action/author_attestation","sign_citation":"https://pith.science/pith/UQTOW7GZPKKOJ6TK3UW5RBU62E/action/citation_signature","submit_replication":"https://pith.science/pith/UQTOW7GZPKKOJ6TK3UW5RBU62E/action/replication_record"}},"created_at":"2026-07-04T15:05:42.052971+00:00","updated_at":"2026-07-04T15:05:42.052971+00:00"}