With only four labeled volumes, adding boundary prediction as an auxiliary task raises left atrium segmentation Dice from 0.587 to 0.774, exceeding semi-supervised baselines that have access to only four unlabeled volumes.
Label Encoding for Regression Networks
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abstract
Deep neural networks are used for a wide range of regression problems. However, there exists a significant gap in accuracy between specialized approaches and generic direct regression in which a network is trained by minimizing the squared or absolute error of output labels. Prior work has shown that solving a regression problem with a set of binary classifiers can improve accuracy by utilizing well-studied binary classification algorithms. We introduce binary-encoded labels (BEL), which generalizes the application of binary classification to regression by providing a framework for considering arbitrary multi-bit values when encoding target values. We identify desirable properties of suitable encoding and decoding functions used for the conversion between real-valued and binary-encoded labels based on theoretical and empirical study. These properties highlight a tradeoff between classification error probability and error-correction capabilities of label encodings. BEL can be combined with off-the-shelf task-specific feature extractors and trained end-to-end. We propose a series of sample encoding, decoding, and training loss functions for BEL and demonstrate they result in lower error than direct regression and specialized approaches while being suitable for a diverse set of regression problems, network architectures, and evaluation metrics. BEL achieves state-of-the-art accuracies for several regression benchmarks. Code is available at https://github.com/ubc-aamodt-group/BEL_regression.
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BoundarySeg:An Embarrassingly Simple Method To Boost Medical Image Segmentation Performance for Low Data Regimes
With only four labeled volumes, adding boundary prediction as an auxiliary task raises left atrium segmentation Dice from 0.587 to 0.774, exceeding semi-supervised baselines that have access to only four unlabeled volumes.