eccDNAMamba is a bidirectional Mamba-2 model with circular sequence augmentation and span masking that classifies eccDNA better than existing genomic foundation models on two benchmarks.
eccdna-pipe: an integrated pipeline for identification, analysis and visualization of extrachromosomal circular dna from high-throughput sequencing data
1 Pith paper cite this work. Polarity classification is still indexing.
1
Pith paper citing it
citation-role summary
background 1
citation-polarity summary
fields
q-bio.GN 1years
2025 1verdicts
CONDITIONAL 1roles
background 1polarities
unclear 1representative citing papers
citing papers explorer
-
eccDNAMamba: A Pre-Trained Model for Ultra-Long eccDNA Sequence Analysis
eccDNAMamba is a bidirectional Mamba-2 model with circular sequence augmentation and span masking that classifies eccDNA better than existing genomic foundation models on two benchmarks.