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Paper Citation Record · LEDGER

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning

As of 13 August 2026, this Paper Citation Record lists 65 of 65 outbound references and 1 inbound Pith citation observation for arXiv:2412.19422.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2412.19422 v2

Coverage vector

measured 65 of 65 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-11T00:42:08.365679Z

measured 66 of 66 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-13T06:32:02.005865+00:00

measured 1 of 1 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-08-06T17:46:50.670273Z

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: pith, observed 2026-08-06T17:46:52.881151Z

Reference resolution

65 of 65 outbound references displayed

  • verified exact2
  • verified fuzzy57
  • unresolved6
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External citation measurements

No source-named external measurement is stored.

Outbound references

Observation eb7e68e9-610a-444a-9dda-da0739877316 · outbound

This paper cites Identification of drug-targ et interac- tions via multi-view graph regularized link propagation mo del,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Identification of drug-targ et interac- tions via multi-view graph regularized link propagation mo del,

Reference 1

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation b8bc9e23-333c-4dff-93de-0952e0333933 · outbound

This paper cites ChemoGraph: Interactive visual exploration o f the chemical space,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning ChemoGraph: Interactive visual exploration o f the chemical space,

Reference 2

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 9ccab110-0f03-437d-bd30-9da23c2dadd3 · outbound

This paper cites an unresolved cited work.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Unresolved cited work

Reference 3

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Source-reported events for the cited work

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Observation 85b0eeff-d12b-4a37-b21e-cff40a35c1b0 · outbound

This paper cites Molecular ge nerative graph neural networks for drug discovery ,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Molecular ge nerative graph neural networks for drug discovery ,

Reference 4

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 8a657452-920f-4b58-a1c8-70d7f48afdc1 · outbound

This paper cites Estimated resear ch and development investment needed to bring a new medicine to market, 2009-2018,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Estimated resear ch and development investment needed to bring a new medicine to market, 2009-2018,

Reference 5

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 41fd19ba-9f03-439f-9594-58a68f693a56 · outbound

This paper cites A crowdsourcing deve l- opment approach based on a neuro-fuzzy network for creating innovative product concepts,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning A crowdsourcing deve l- opment approach based on a neuro-fuzzy network for creating innovative product concepts,

Reference 6

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation beb30582-1f0b-4e88-beff-f5651fb66288 · outbound

This paper cites Discovery of nov el inhibitors of a critical brain enzyme using a homology model and a deep convolutional neural network,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Discovery of nov el inhibitors of a critical brain enzyme using a homology model and a deep convolutional neural network,

Reference 7

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 05e5d1dd-da52-410d-be8d-c59786c678df · outbound

This paper cites The light and dark sides of virtual scree ning: what is there to know?.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning The light and dark sides of virtual scree ning: what is there to know?

Reference 8

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 4fc75daa-7b14-4df5-bacf-9aa20d7b21b1 · outbound

This paper cites Machine lear ning in virtual screening,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Machine lear ning in virtual screening,

Reference 9

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation e0535aec-fa76-4744-86f1-fcc49b1f1bd6 · outbound

This paper cites Automated de novo drug desi gn: are we nearly there yet?.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Automated de novo drug desi gn: are we nearly there yet?

Reference 10

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 53a3063c-55f8-415c-83a3-7e7a264ea40e · outbound

This paper cites A review on applications of com puta- tional methods in drug screening and design,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning A review on applications of com puta- tional methods in drug screening and design,

Reference 11

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation fab9dacb-fd6a-4489-8279-21cf7e612025 · outbound

This paper cites Discovery and structure–activity analysis of selective e strogen receptor modulators via similarity-based virtual screeni ng,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Discovery and structure–activity analysis of selective e strogen receptor modulators via similarity-based virtual screeni ng,

Reference 12

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 7a4e261d-00d7-4f35-9c34-e230733e575b · outbound

This paper cites Mol ec- ular graph enhanced transformer for retrosynthesis predic tion,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Mol ec- ular graph enhanced transformer for retrosynthesis predic tion,

Reference 13

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation ce27d3b6-9f1e-4fc6-9487-f87d5c35ca4c · outbound

This paper cites Bifunctional tools to study adenosine receptors ,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Bifunctional tools to study adenosine receptors ,

Reference 14

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raw_fallback, observed 2026-08-11T00:42:08.877243Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 68b30d03-d714-467c-9891-b36b0632ac9a · outbound

This paper cites Molecula r property prediction and molecular design using a supervise d grammar variational autoencoder,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Molecula r property prediction and molecular design using a supervise d grammar variational autoencoder,

Reference 15

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 95205c9f-85a3-4630-9507-4f131c9dfaed · outbound

This paper cites Atte ntion- based generative models for de novo molecular design,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Atte ntion- based generative models for de novo molecular design,

Reference 16

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation fd1e3c7f-012b-4576-b89f-b866797c68ba · outbound

This paper cites MolGAN: An implicit generative model for small molecular graphs.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning MolGAN: An implicit generative model for small molecular graphs

Reference 17

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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Observation bdc78d03-2fcd-4aa2-9982-0e0d672e5f6b · outbound

This paper cites Transf ormer- based objective-reinforced generative adversarial netwo rk to gen- erate desired molecules,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Transf ormer- based objective-reinforced generative adversarial netwo rk to gen- erate desired molecules,

Reference 18

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 1da811b0-14b2-456d-aa9d-669c2af4c39d · outbound

This paper cites SpotGAN: A reverse-transformer GAN generates scaffold-constrained molecules with property o ptimiza- tion,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning SpotGAN: A reverse-transformer GAN generates scaffold-constrained molecules with property o ptimiza- tion,

Reference 19

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation de3e162a-d05b-403b-9026-b662a80e271d · outbound

This paper cites The impact of assay technology as applied to safety assessment in reducing compound attritio n in drug discovery ,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning The impact of assay technology as applied to safety assessment in reducing compound attritio n in drug discovery ,

Reference 20

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 70da2411-a130-43ec-a2da-e5a2152af4b1 · outbound

This paper cites De novo structure-based drug design using deep learning,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning De novo structure-based drug design using deep learning,

Reference 21

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation e13fb895-7bd0-4261-a1f1-a422ff61ae78 · outbound

This paper cites An in silico explaina ble multiparameter optimization approach for de novo drug desi gn against proteins from the central nervous system,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning An in silico explaina ble multiparameter optimization approach for de novo drug desi gn against proteins from the central nervous system,

Reference 22

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 34abf542-c960-4392-94d7-d32a747df34f · outbound

This paper cites De novo generation of hit-like molecules from g ene expression signatures using artificial intelligence,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning De novo generation of hit-like molecules from g ene expression signatures using artificial intelligence,

Reference 23

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 2f40462f-8bae-43ac-b1a5-3e52c409f52a · outbound

This paper cites TRIOMPHE: Transcriptome- based inference and generation of molecules with desired phenoty pes by machine learning,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning TRIOMPHE: Transcriptome- based inference and generation of molecules with desired phenoty pes by machine learning,

Reference 24

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 363588cd-1cc6-4156-af46-57ff87656ec9 · outbound

This paper cites Captur ing temporal dynamics of users’ preferences from purchase hist ory big data for recommendation system,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Captur ing temporal dynamics of users’ preferences from purchase hist ory big data for recommendation system,

Reference 25

Resolution
verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation d84c2ea0-ea5e-465a-946f-8813e240489e · outbound

This paper cites A multi-factor approa ch for stock price prediction by using recurrent neural networ ks,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning A multi-factor approa ch for stock price prediction by using recurrent neural networ ks,

Reference 26

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.778011Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 598db102-3514-4ddb-b342-6acc4ab35ba9 · outbound

This paper cites Time series forecasting of petro leum production using deep LSTM recurrent networks,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Time series forecasting of petro leum production using deep LSTM recurrent networks,

Reference 27

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.767913Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 00eeac7d-fa08-4859-9285-2bc7f9666863 · outbound

This paper cites From theory to experiment: transformer-based generation enables rapid discovery of novel reactions,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning From theory to experiment: transformer-based generation enables rapid discovery of novel reactions,

Reference 28

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.759097Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 70f06166-b1ce-44cf-8985-70a5d6532e66 · outbound

This paper cites an unresolved cited work.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Unresolved cited work

Reference 29

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unresolved
raw_fallback, observed 2026-08-11T00:42:08.750939Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation efc9ed44-7d5b-4894-8cd5-1cde0c84ed78 · outbound

This paper cites Structure-based design , synthesis, and evaluation of peptide-mimetic SARS 3CL prote ase inhibitors,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Structure-based design , synthesis, and evaluation of peptide-mimetic SARS 3CL prote ase inhibitors,

Reference 30

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.743051Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation a304b7bb-81db-47ed-a0f8-5bc3fd803458 · outbound

This paper cites Self-referencing embedded strings (SELFIES): A 100% robust molecular string representation,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Self-referencing embedded strings (SELFIES): A 100% robust molecular string representation,

Reference 31

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.734367Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 65a1b783-0040-4d76-aa93-7d391f9f4697 · outbound

This paper cites Junction tree var iational au- toencoder for molecular graph generation,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Junction tree var iational au- toencoder for molecular graph generation,

Reference 32

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.725962Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

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Observation 13e2b0c0-04e8-4ab6-bae2-92d94a715799 · outbound

This paper cites Interpretable molec ular graph generation via monotonic constraints,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Interpretable molec ular graph generation via monotonic constraints,

Reference 33

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.716664Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.269975Z digest=sha256:7d3a6ebf35bcf8894e9effa0296fc3b5ac64064778ec2eeb152694434a3df887

Observation 3ba1c813-2528-459f-ba24-cd4cf364f6ca · outbound

This paper cites Small molecul e generation via disentangled representation learning,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Small molecul e generation via disentangled representation learning,

Reference 34

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.706808Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.273070Z digest=sha256:f2705eab59ac2be3a736d22e0ed414cbfce5891c918097887acaca7bac229971

Observation ffa002bf-811b-4dda-bcb3-90c6b9bce864 · outbound

This paper cites MoFlow: an invertible flow model for gen- erating molecular graphs,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning MoFlow: an invertible flow model for gen- erating molecular graphs,

Reference 35

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.697369Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.276271Z digest=sha256:7e60e90dbb1997592c8d84ebe7f4d9941047bf2ef221b02c90ef74f2653befd1

Observation 43ee6369-82c9-497f-b32d-749619f65df8 · outbound

This paper cites FastFlows: Flow-Based Models for Molecular Graph Generation.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning FastFlows: Flow-Based Models for Molecular Graph Generation

Reference 36

Resolution
verified exact
local_arxiv, observed 2026-08-11T00:42:08.431153Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.279444Z digest=sha256:76d872a383aa671aaab1b6e129b7d5b97526812cdcee451cc40d7a78f4cf781b

Observation 275d69ac-83c8-4a0d-95c5-82c604b78511 · outbound

This paper cites DiGress: Discrete denoising diffusion for gr aph gen- eration,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning DiGress: Discrete denoising diffusion for gr aph gen- eration,

Reference 37

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.687873Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.282880Z digest=sha256:f28e24d53ce982322fed6660c0e9e1e033711690cb20e327d9b6e255cde18bd6

Observation d618104c-76b4-4922-b811-f025b90859c4 · outbound

This paper cites Continuous control with deep reinforcement learning.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Continuous control with deep reinforcement learning

Reference 38

Resolution
unresolved
no resolver link, observed 2026-08-11T00:42:08.286068Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-11T00:42:08.286068Z digest=sha256:8f84e98364269872065fab8f57584f8c4750959b3680af1b99d89bec08349efe

Observation affc9c7e-39c0-44af-8747-5c6583d44cd1 · outbound

This paper cites Adversarial learned mol ecular graph inference and generation,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Adversarial learned mol ecular graph inference and generation,

Reference 39

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.678548Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.289544Z digest=sha256:3c689d181918817ee0b01f210105a543fb81cee8348b73526a2c7123e193539e

Observation 33f768ab-ce26-4e8c-b6e4-7fb59f067443 · outbound

This paper cites Gr ammar variational autoencoder,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Gr ammar variational autoencoder,

Reference 40

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.669355Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.292483Z digest=sha256:ccb9806175378535efc2cb2709c46f75d1d45c72db4c0555010f0be804c364e7

Observation 23bcd16e-3f2f-44fe-a382-ce8901277ce4 · outbound

This paper cites DNMG: Deep molecular generative model by fusion of 3d information for de novo drug design,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning DNMG: Deep molecular generative model by fusion of 3d information for de novo drug design,

Reference 41

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.659456Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.295147Z digest=sha256:76957ad80a44cc136b9eee444500853258d032a7dc50ff21253dd5561d39d49b

Observation 2c23567f-8bcb-43b0-9c05-b706fa5f623a · outbound

This paper cites Monte-carlo simulation balan cing,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Monte-carlo simulation balan cing,

Reference 42

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.650006Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.297975Z digest=sha256:7c1b6e438716344be7e0b4186b1e4282a087cd652319bb4ae074bd75ade052f0

Observation 92868a58-4478-4e11-a3c1-5885bdb0141f · outbound

This paper cites A review of molecular representation in the age of machine learning,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning A review of molecular representation in the age of machine learning,

Reference 43

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.640504Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.300658Z digest=sha256:c386b7c50b48ffe3da6de6e7db7d96569188560162b8a494e8a50691fad80b99

Observation 064d4485-bcd6-4f6d-a5cf-d5c9fe4a5eac · outbound

This paper cites SELF- IES and the future of molecular string representations,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning SELF- IES and the future of molecular string representations,

Reference 44

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.631403Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.303323Z digest=sha256:500c1e8bd3cdda447fde29c6fd848c5bc0f535b9343cb4ea9a5c2b57ed010d93

Observation eb00b092-eb18-4e19-890a-0cfd1c1f721c · outbound

This paper cites Hierarchical Structure Enhances the Convergence and Generalizability of Linear Molecular Representation.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Hierarchical Structure Enhances the Convergence and Generalizability of Linear Molecular Representation

Reference 45

Resolution
verified exact
local_arxiv, observed 2026-08-11T00:42:08.409293Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.306280Z digest=sha256:dec3f5a2392261bc1c90d68b47950ca51344c794c3ba0b6e339c6cf50a42f067

Observation f58b1d11-5677-49e1-8f13-bb9462d8cd7d · outbound

This paper cites Predicting physiolo gical effects of chemical substances using natural language proc essing,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Predicting physiolo gical effects of chemical substances using natural language proc essing,

Reference 46

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.622741Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.309361Z digest=sha256:dc5c7973aa9ff8768176b1cc2a4f60db860d80bd3b0bafb0c0a897ef18393769

Observation 3db83c86-ac8f-45fc-907f-1e9299470cf9 · outbound

This paper cites Advances in machine lea rn- ing with chemical language models in molecular property and reaction outcome predictions,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Advances in machine lea rn- ing with chemical language models in molecular property and reaction outcome predictions,

Reference 47

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.613541Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.312062Z digest=sha256:18cd0936bd1a582c70df3766fa58aded3292b6beaf1575a2366343c21240ae52

Observation 005125c1-e8f4-4abf-8b5d-70d68f296813 · outbound

This paper cites Exploring chemical space — generative models and their evaluation,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Exploring chemical space — generative models and their evaluation,

Reference 48

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.604479Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.314834Z digest=sha256:588a27f3e963317632045a02d8aae4774eae82c747a8e39284d12cfb7761747b

Observation 99f046f9-0903-4b9b-9291-7c39ed723c5c · outbound

This paper cites Lifelong genera- tive modeling,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Lifelong genera- tive modeling,

Reference 49

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.596114Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.317709Z digest=sha256:94679fc373b9bd2c04b1a6b3a0e1dfc64ac2be72bc6cd770bb715f1a0aa70e9e

Observation f7e366f6-dc46-4e68-b5f3-6bc844a64344 · outbound

This paper cites Kullback-leibler divergence,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Kullback-leibler divergence,

Reference 50

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.587143Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.320195Z digest=sha256:26eae7f714b145060621730bacb5316721d15e5dc8a33d20d4501da6eaedaf6f

Observation 02630eb3-3b90-49d4-aaef-ab70c37e5be4 · outbound

This paper cites LINCS canvas browser: interactive web app to query , browse and interrogate lincs l1000 gene expression signatures,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning LINCS canvas browser: interactive web app to query , browse and interrogate lincs l1000 gene expression signatures,

Reference 51

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.577326Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.322710Z digest=sha256:1656574231c37dadc6fa5e45d68f4606f855bf0fd2f44aa3b65d7b90dfa975b1

Observation a8b8dfb7-34eb-496b-9bf0-5f3bef67c991 · outbound

This paper cites Extraction and analysis of signatures from the gene expression omnibus by the crowd,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Extraction and analysis of signatures from the gene expression omnibus by the crowd,

Reference 52

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.567443Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.325545Z digest=sha256:04f740a613edc1cc5dd91a83962de2717f8dc57f59c15defa9204166fbf82d7b

Observation 7385a13e-e9fd-4939-8440-21dafc6012ba · outbound

This paper cites Dropout: a simple way to prevent neural networks from overfitting,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Dropout: a simple way to prevent neural networks from overfitting,

Reference 53

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.556575Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.328106Z digest=sha256:1bde999c58ed602e2dd0e42137e5ba7e49f5ba28f24d50a9bf63678d0a8f86f9

Observation 61f0ebd4-2fca-481a-8ce1-2ae82443a191 · outbound

This paper cites Adam: A Method for Stochastic Optimization.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Adam: A Method for Stochastic Optimization

Reference 54

Resolution
unresolved
no resolver link, observed 2026-08-11T00:42:08.330758Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-11T00:42:08.330758Z digest=sha256:c4fc92d119b96fb8e4cb27d09be16711b965f9f6d5edc4552b948e44c6a65dbc

Observation 343a9b34-3838-482c-a067-f0b625b63fff · outbound

This paper cites Quantifying the chemical beauty of drugs,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Quantifying the chemical beauty of drugs,

Reference 55

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.546923Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.333678Z digest=sha256:37e5a88ebf841f4f26a7dc4e64a663f2fe985be9dc4578ba0cd95bbc0643d478

Observation 27593e0d-2b3a-4beb-97da-4e52625bfbdc · outbound

This paper cites Estimation of synthetic a ccessibility score of drug-like molecules based on molecular complexity and fragment contributions,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Estimation of synthetic a ccessibility score of drug-like molecules based on molecular complexity and fragment contributions,

Reference 56

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.536933Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.336127Z digest=sha256:a79ad657789ff5275b132027bade65334999c564b58d94fa1bb83a91db6d3f27

Observation dd42d43d-e3c0-44dc-be29-0e01ed791090 · outbound

This paper cites Life beyond the tanimoto co- efficient: similarity measures for interaction fingerprint s,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Life beyond the tanimoto co- efficient: similarity measures for interaction fingerprint s,

Reference 57

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.527074Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.338762Z digest=sha256:ed9eb7877f305fe41cabebd8b1ffd590559a3e7b3175525c71e284e43f60408f

Observation f4c6b241-2c84-4b41-af3f-454383a910aa · outbound

This paper cites Rdkit documentation,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Rdkit documentation,

Reference 58

Resolution
unresolved
no resolver link, observed 2026-08-11T00:42:08.341883Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-11T00:42:08.341883Z digest=sha256:1e742f2abfc3c5e404af0b8edef1ca683da10f7f1981e642d11b5de7fdfe81eb

Observation 25399461-984b-4d08-8b93-83b86185f2bb · outbound

This paper cites MolFinder: an evolutionary algorit hm for the global optimization of molecular properties and the ext ensive exploration of chemical space using smiles,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning MolFinder: an evolutionary algorit hm for the global optimization of molecular properties and the ext ensive exploration of chemical space using smiles,

Reference 59

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.511678Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.345022Z digest=sha256:ede885b765026b298905a0c1822837e37ee6220b80c5380aa9fbb24afd46f474

Observation 00a7ea57-eaed-47cc-9f4d-8519aba53b15 · outbound

This paper cites Prediction of drug-likeness using grap h convolutional attention network,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Prediction of drug-likeness using grap h convolutional attention network,

Reference 60

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.503029Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.349401Z digest=sha256:63da00763de4756d50fa726a62d39d05def45b65afde53030de323fa07b384da

Observation f34c1851-e84b-462f-8d59-2a6e16f819ba · outbound

This paper cites Extended-connectivity fingerpr ints,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Extended-connectivity fingerpr ints,

Reference 61

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.493608Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.352585Z digest=sha256:f0d7fca49c0212f7816ce28fe9ebd9d731ba216568f4f57dc4398d2195178783

Observation 3c8a5a70-e5c1-4bf9-a069-766a6816462a · outbound

This paper cites Improving MRI segmentation with probabilistic GHSOM and multiobjective optimization,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Improving MRI segmentation with probabilistic GHSOM and multiobjective optimization,

Reference 62

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.483380Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.355714Z digest=sha256:5240639ec3391a623b132de5290c7bb989c62442347af339e551a93534c063a9

Observation 7ab8a1ad-3267-4c91-8e74-17a63697f984 · outbound

This paper cites Single-layer artificial neural networks for gene expressio n analy- sis,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Single-layer artificial neural networks for gene expressio n analy- sis,

Reference 63

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.473243Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.358893Z digest=sha256:5b1bcab7571472683443df2f71f7d2679103e820ffe4409abfe059f0046f5365

Observation ad5c7505-3bd0-44eb-8aa0-1e204912ba81 · outbound

This paper cites De novo drug design based on patient gene expression profiles vi a deep learning,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning De novo drug design based on patient gene expression profiles vi a deep learning,

Reference 64

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.462431Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.362291Z digest=sha256:de8fae18759dcc29865e5892d9be8c0d5c7d40edf855aa06eea06862318db964

Observation f7ac7696-4d26-490d-a1a0-543e29709017 · outbound

This paper cites Prediction of cancer drugs by chemical-chem ical interactions,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Prediction of cancer drugs by chemical-chem ical interactions,

Reference 65

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.452080Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-11T00:42:08.365679Z digest=sha256:3e1875a9c00860e3ee6aee0add8bb3540424d1b70f306aff14c8ea853e0bb4e6

Pith citing papers

Observation 07b7fcaf-2a47-4781-b735-7f1c68e1da14 · inbound

TextOmics-Guided Diffusion for Hit-like Molecular Generation cites this paper.

TextOmics-Guided Diffusion for Hit-like Molecular Generation De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning

Reference 13

Resolution
verified exact
local_arxiv, observed 2026-08-06T17:46:52.949950Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

source=pdf_text observed=2026-08-06T17:46:50.670273Z digest=sha256:34406785164608d29fb8298186189d48212eb2a18728813a1254654de0802729