Pith. sign in

Paper Citation Record · LEDGER

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks

As of 20 August 2026, this Paper Citation Record lists 49 of 49 outbound references and 0 inbound Pith citation observations for arXiv:2505.11185.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2505.11185 v1

Coverage vector

measured 49 of 49 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-15T21:00:32.026817Z

measured 49 of 49 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-20T06:33:59.587034+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

49 of 49 outbound references displayed

  • verified exact0
  • verified fuzzy39
  • unresolved10
  • parse uncertain0
  • malformed identifier0
  • metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 73320898-8308-4c9c-8929-a57425a51768 · outbound

This paper cites From gpus to ai and quantum: three waves of acceleration in bioinformatics.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks From gpus to ai and quantum: three waves of acceleration in bioinformatics

Reference 1

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.622923Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.821094Z digest=sha256:9ae4ea0bc2715270fcaeec73bd9c907410db2aa70fa67478d61e790bdb8a03d3

Observation 14f4a053-fbee-4298-8ee3-1d27343378f5 · outbound

This paper cites Discovering and linking public omics data sets using the omics discovery index.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Discovering and linking public omics data sets using the omics discovery index

Reference 2

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.610220Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.826191Z digest=sha256:679a4eead46049db61d7711065329b94a4cc85bca09aa56095e177675b2e0921

Observation faeb880a-4e73-4654-b461-f2254711860f · outbound

This paper cites Quantifying the impact of public omics data.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Quantifying the impact of public omics data

Reference 3

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.597484Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.830918Z digest=sha256:3aa7f3869b31ae71dbbb9e871510d250cd191596c00b432f8ca33a81f2dff635

Observation 1e6e2612-f02e-48da-b2d1-82bda3d99315 · outbound

This paper cites Network medicine: a network- based approach to human disease.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Network medicine: a network- based approach to human disease

Reference 4

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.585051Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.835313Z digest=sha256:62bdc0944c705943454df37e41b079f11bae0d6aacc7601fd0bb9be2bee25e39

Observation f7e21fb1-4f8e-46d6-9788-af5b06807ee4 · outbound

This paper cites The biogrid database: A comprehensive biomedical resource of curated protein, genetic, and chemical interactions.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks The biogrid database: A comprehensive biomedical resource of curated protein, genetic, and chemical interactions

Reference 5

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.573369Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.839741Z digest=sha256:2c20757ac91e9ceefeb9d46041e660cd74d2b04859b62312dff3689269947353

Observation b5624760-0713-4d2d-b3d9-39de5983dcdc · outbound

This paper cites The string database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks The string database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest

Reference 6

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.561922Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.844046Z digest=sha256:3aab11729463c108bd06855e708e5b01d9fd5676f3f1a8391615aa4dc5ad5e30

Observation d07cb0bf-def2-42c6-b35a-0f5b9cf7883b · outbound

This paper cites A reference map of the human binary protein interactome.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks A reference map of the human binary protein interactome

Reference 7

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.549235Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.848903Z digest=sha256:acf8ed95a3c31bdadbc10a931508977077ca0054a099c33626dc2fc4a9a5ea3f

Observation 15212fe7-9b06-48fe-82a5-ec0b4c60b27f · outbound

This paper cites The power of protein interaction networks for associating genes with diseases.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks The power of protein interaction networks for associating genes with diseases

Reference 8

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.536047Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.852831Z digest=sha256:16f1e2192297e220a9adb5174a87636b383eabc18004760f5da5628d9641d0c1

Observation 31a35321-7ac5-428f-ab61-5249391700b8 · outbound

This paper cites Niapu: network-informed adaptive positive-unlabeled learning for disease gene identification.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Niapu: network-informed adaptive positive-unlabeled learning for disease gene identification

Reference 9

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.523677Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.856710Z digest=sha256:b9f3fcf13593418a94ed78021ff275959205698aa3ac0e647fa5ebd746d0d05d

Observation 6de4414e-492b-41aa-b751-998c7aa22f48 · outbound

This paper cites Xgdag: explainable gene–disease associations via graph neural networks.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Xgdag: explainable gene–disease associations via graph neural networks

Reference 10

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.508264Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.860857Z digest=sha256:93a1ebd3d7fece4918f6daa3f67bbd3b36dd31243567aae35f8e1522ad2b16c6

Observation f5c3021a-ddd4-48b2-b496-742eaad38abf · outbound

This paper cites A survey on computational models for predicting protein–protein interactions.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks A survey on computational models for predicting protein–protein interactions

Reference 11

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.494529Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.864688Z digest=sha256:3aced0673b8ddfc04c719a80d8b5b26a624a90a44d5751b9573a84afdf854648

Observation 09546291-2085-4112-bf21-f1d89c2e19e6 · outbound

This paper cites Gene regulatory network inference in the era of single-cell multi-omics.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Gene regulatory network inference in the era of single-cell multi-omics

Reference 12

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.481173Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.868561Z digest=sha256:8364730fdea1e28e52eedbcda50b5dd187444f53ab89085b94607fd3b61cddae

Observation afae4802-b98f-4d93-b1e6-3bc2ff001a88 · outbound

This paper cites Disgenet: a com- prehensive platform integrating information on human disease-associated genes and variants.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Disgenet: a com- prehensive platform integrating information on human disease-associated genes and variants

Reference 13

Resolution
unresolved
no resolver link, observed 2026-08-15T21:00:31.872481Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-15T21:00:31.872481Z digest=sha256:8da20499278114bc152bdf278bec295133d679981e7f6a24f09129a8e1b781ec

Observation 75ce641a-a2f7-4c44-ba2f-5eb5950a4fe6 · outbound

This paper cites The disgenet knowledge platform for disease genomics: 2019 update.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks The disgenet knowledge platform for disease genomics: 2019 update

Reference 14

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.461823Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.876610Z digest=sha256:10766cc2c1793528081e5e80d5b14da448383e661d7e48d1cc5d7b431134afae

Observation dcfeeecf-a5ac-4260-b710-6623f4d42b80 · outbound

This paper cites Drugbank 6.0: the drugbank knowledgebase for 2024.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Drugbank 6.0: the drugbank knowledgebase for 2024

Reference 15

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.450290Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.880940Z digest=sha256:2dc8002a06ccc3c2451ba51940384d09af271dc515866dff8d37fe6c616d37cd

Observation 06764530-d000-4126-8744-f7f37fdda112 · outbound

This paper cites The comparative toxicogenomics database: update 2017.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks The comparative toxicogenomics database: update 2017

Reference 16

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.438285Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.884874Z digest=sha256:4010fda5060ce10b5e4936a498872799108f09591c604df5bb91e6e81be5c5a3

Observation beae3e39-051a-46f8-a830-e64dd9836d8c · outbound

This paper cites The sider database of drugs and side effects.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks The sider database of drugs and side effects

Reference 17

Resolution
unresolved
no resolver link, observed 2026-08-15T21:00:31.890325Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-15T21:00:31.890325Z digest=sha256:8553d9fac2aa2c7934ebf9ef9030a7d78ee40e09ad4df8e0076308a7f8943124

Observation 7145ec53-173e-434b-b02a-97d84e7463be · outbound

This paper cites Data-driven prediction of drug effects and interactions.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Data-driven prediction of drug effects and interactions

Reference 18

Resolution
unresolved
no resolver link, observed 2026-08-15T21:00:31.894930Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-15T21:00:31.894930Z digest=sha256:aaa109d863d7ba309d3a0492814c6d09e8d3eaf3830a894f58c308c20fc3863d

Observation b4ee4c0e-4a25-4ebe-8710-b0dec11e9226 · outbound

This paper cites Knowledge graphs for drug repurposing: a review of databases and methods.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Knowledge graphs for drug repurposing: a review of databases and methods

Reference 19

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.411872Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.899221Z digest=sha256:d8323acaffe272409b258ce1c7cb375e397ab048418316941c9a18334adb2939

Observation da025918-2b45-467b-b528-6cb2125e0d7c · outbound

This paper cites An open source knowledge graph ecosystem for the life sciences.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks An open source knowledge graph ecosystem for the life sciences

Reference 20

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.399250Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.907427Z digest=sha256:7bac317973184d3fae2b52afe6d93cf49cd8ae2ec0470eed8e681bc08e72b1fb

Observation 8850ef52-a8fb-42b3-af39-f5c1c9b8f5a1 · outbound

This paper cites Ioannidis, Xiang Song, Saurav Manchanda, Mufei Li, Xiaoqin Pan, Da Zheng, Xia Ning, Xiangxiang Zeng, and George Karypis.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Ioannidis, Xiang Song, Saurav Manchanda, Mufei Li, Xiaoqin Pan, Da Zheng, Xia Ning, Xiangxiang Zeng, and George Karypis

Reference 21

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.386710Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.912918Z digest=sha256:d7cd4f9c9bed8f99b8c26ddec4d8c80228c72a34b78c97a34e8274ff4c2b3c4e

Observation 15d5c7a7-bcc0-475c-a574-c67fd388b6c8 · outbound

This paper cites Few-shot link prediction via graph neural networks for Covid-19 drug-repurposing.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Few-shot link prediction via graph neural networks for Covid-19 drug-repurposing

Reference 22

Resolution
unresolved
no resolver link, observed 2026-08-15T21:00:31.919727Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-15T21:00:31.919727Z digest=sha256:72946c3433b1f6ae7c2b5897e653be505b96cc160c7f096b4c757665c63b8482

Observation 4a1cb45d-ee73-4c6c-a53c-04c349be6ebd · outbound

This paper cites Molecular-evaluated and explainable drug repurpos- ing for covid-19 using ensemble knowledge graph embedding.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Molecular-evaluated and explainable drug repurpos- ing for covid-19 using ensemble knowledge graph embedding

Reference 23

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.374564Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.924313Z digest=sha256:4038746de8df5a153411de52d8086339c619a614d4a3161a10341733470498db

Observation 346ef456-1a0f-4e30-971c-0f0c196578b9 · outbound

This paper cites Drugbank: a knowledgebase for drugs, drug actions and drug targets.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Drugbank: a knowledgebase for drugs, drug actions and drug targets

Reference 24

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.362729Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.928883Z digest=sha256:ba0c322e3de8c90e37ca013621fad255a61bfa053116da86ce09f6252c9f6500

Observation b7c61abb-827f-4183-9036-cc94a93deaa3 · outbound

This paper cites Systematic integration of biomedical knowledge prioritizes drugs for repurposing.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Systematic integration of biomedical knowledge prioritizes drugs for repurposing

Reference 25

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.349811Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.932997Z digest=sha256:1abae53dd4e2cc656f6b9d749c9704dc9fb852637150ec2f0f37bff33676f530

Observation 539ebdc6-2f3e-4528-9d9a-f5c449b66173 · outbound

This paper cites A global network of biomedical relationships derived from text.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks A global network of biomedical relationships derived from text

Reference 26

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.338426Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.936936Z digest=sha256:8105c8b816a781224df316e4a86ef158fb0f24ce4144605bee7d7a533972ac77

Observation 47301c18-fb43-4481-9990-14fecd23d5f5 · outbound

This paper cites The intact database: efficient access to fine-grained molecular interaction data.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks The intact database: efficient access to fine-grained molecular interaction data

Reference 27

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.326635Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.940922Z digest=sha256:6e9a296bc6956a7b358df6bb1db54c71b1fadeff252db782226bf06df3589f63

Observation cfb34173-42a1-46ed-825d-09e0a1102a7f · outbound

This paper cites Dgidb: mining the druggable genome.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Dgidb: mining the druggable genome

Reference 28

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.313889Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.944647Z digest=sha256:245f40b141d3a495b97e534bcf80d78c11cac0ac76eacc518c98c0280eccb1d3

Observation bf721226-c3c7-48cc-b825-781a48ae70bb · outbound

This paper cites Dgidb 5.0: rebuilding the drug–gene interaction database for precision medicine and drug discovery platforms.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Dgidb 5.0: rebuilding the drug–gene interaction database for precision medicine and drug discovery platforms

Reference 29

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.301759Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.948426Z digest=sha256:04158dff32e8301331da21367fed986c894729d02480b03cba746e40a3d70f6a

Observation 22c3fd41-463a-4cda-8304-e1bdadfcc2a0 · outbound

This paper cites Gene ontology: tool for the unification of biology.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Gene ontology: tool for the unification of biology

Reference 30

Resolution
unresolved
no resolver link, observed 2026-08-15T21:00:31.952566Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-15T21:00:31.952566Z digest=sha256:90cb17929d9139aa760d4c2aa9d71c3a1c6e9052bec571c12ff0cf75d4c87dc7

Observation 5ae555e8-a12f-49b2-992f-0aa9e33d6dde · outbound

This paper cites Unichem: a unified chemical structure cross-referencing and identifier tracking system.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Unichem: a unified chemical structure cross-referencing and identifier tracking system

Reference 31

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.281866Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.956186Z digest=sha256:efb71ba8e59cb09a19aea32c773d26d8a7fa010e21a510670f552044ec8c94d6

Observation 7dc8dd03-764f-47fc-b957-ac476bd2803e · outbound

This paper cites Chembl: a large-scale bioactivity database for drug discovery.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Chembl: a large-scale bioactivity database for drug discovery

Reference 32

Resolution
unresolved
no resolver link, observed 2026-08-15T21:00:31.960157Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-15T21:00:31.960157Z digest=sha256:1dfb3eeb1c2f1efea02ce19eec008388d4daf43fecfbe986076d46a6d258fcee

Observation 36bdf00f-84f5-4305-8780-1326e5bd995e · outbound

This paper cites The chembl database in 2023: a drug discovery platform spanning multiple bioactivity data types and time periods.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks The chembl database in 2023: a drug discovery platform spanning multiple bioactivity data types and time periods

Reference 33

Resolution
unresolved
no resolver link, observed 2026-08-15T21:00:31.963786Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-15T21:00:31.963786Z digest=sha256:f8bb101de0a833b141607478c91a6bd3708287026c06e1f8da2bd739496b6c1c

Observation a879acfe-362c-416c-a026-b8b700d2ede5 · outbound

This paper cites Chebi: a database and ontology for chemical entities of biological interest.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Chebi: a database and ontology for chemical entities of biological interest

Reference 34

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.256242Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.967673Z digest=sha256:0ccb32dd9bee52617663fb5717c8182289760740ac4f2c336ab0ddbb022b6721

Observation d68c13dd-2e89-4543-a920-92ea24242446 · outbound

This paper cites Chebi in 2016: Improved services and an expanding collection of metabolites.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Chebi in 2016: Improved services and an expanding collection of metabolites

Reference 35

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.245284Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.971270Z digest=sha256:f55878bc02735423e11347c1f3f1278dde69e30dbb61d907bf13d0af17925748

Observation 37c8b0be-348a-4357-bc9e-b9df51bf9189 · outbound

This paper cites Pubchem: integrated platform of small molecules and biological activities.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Pubchem: integrated platform of small molecules and biological activities

Reference 36

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.233847Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.974994Z digest=sha256:3df7362b18d02bc82d85519076c70ff003c321b8f59a0a18e2a0cce416a18ce7

Observation 68b5eb35-bca1-425e-907f-d7d9d8f9947e · outbound

This paper cites Pubchem as a public resource for drug discovery.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Pubchem as a public resource for drug discovery

Reference 37

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.221940Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.978769Z digest=sha256:8d1deb253a7f34a36e78e41dfc7d6c4f06859e2cab4a69ad875a7ef0fd50ae9c

Observation 4d6bbe8e-934d-4b01-a28f-d5acefe093a1 · outbound

This paper cites Pubchem 2025 update.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Pubchem 2025 update

Reference 38

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.210019Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.982782Z digest=sha256:16b614cea1b9e49d942ff00d508219b04faabcd84cc45eb61ff8230eb099e2b9

Observation 6fe79e5f-d792-43fa-83de-2af647bfa9df · outbound

This paper cites Human disease ontology 2018 update: classification, content and workflow expansion.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Human disease ontology 2018 update: classification, content and workflow expansion

Reference 39

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.198220Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.986850Z digest=sha256:64631ed60b48e9f530e9e679ceea0a648b9c749885a93740d64c5e9633b03b5d

Observation 25a47ab4-0e54-42f4-83f7-7b4aa7fff397 · outbound

This paper cites The human disease ontology 2022 update.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks The human disease ontology 2022 update

Reference 40

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.186118Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.990743Z digest=sha256:5b825f92a620eb06caf69469887825b4e8a40657b3e8b43fcab2cf4523c0b5e2

Observation d8562a4b-99d7-4a73-8119-fbed481f2d07 · outbound

This paper cites Reactome: a knowledge base of biologic pathways and processes.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Reactome: a knowledge base of biologic pathways and processes

Reference 41

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.174306Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.994537Z digest=sha256:e36971c393200f01bd943a70d030a8e3bf5cad1a735643a230561d1478011e26

Observation 5d7541cd-3475-4b4f-b69a-1acaf0f62540 · outbound

This paper cites The reactome pathway knowledgebase 2024.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks The reactome pathway knowledgebase 2024

Reference 42

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.162449Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:31.998489Z digest=sha256:d5724058465486f7ff663c629a7571243755f0fe714f7a736f5ae4b999d1ab28

Observation 85e663e1-9ae1-454d-afec-fb6d7b925125 · outbound

This paper cites Onsides database: Extracting adverse drug events from drug labels using natural language processing models.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Onsides database: Extracting adverse drug events from drug labels using natural language processing models

Reference 43

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.149806Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:32.002931Z digest=sha256:d77939622050865012d803ba2c746fe9c67d065914162e45448449d1cfdd4391

Observation 0773971e-0d8a-4aff-a925-d5b5c8a2ba8c · outbound

This paper cites Smiles, a chemical language and information system.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Smiles, a chemical language and information system

Reference 44

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.137691Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:32.006838Z digest=sha256:d567454af5f994a73bf2ab23d91c9ddafd228af3c1944671c3b37eae164a1362

Observation 90f3b86d-0b75-4915-ad8c-fa73414c48cc · outbound

This paper cites an unresolved cited work.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Unresolved cited work

Reference 45

Resolution
unresolved
raw_fallback, observed 2026-08-15T21:00:32.124554Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:32.010855Z digest=sha256:f3ee2e2a788c490413b307e11ca1552766cb421ca1f39fd437e4516df5952c55

Observation 63c0de9a-18d6-4044-8f30-12d178704bea · outbound

This paper cites Extended-connectivity fingerprints.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Extended-connectivity fingerprints

Reference 46

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.110237Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:32.015019Z digest=sha256:bbae864da116e9af65558d959a8fa105c1fc334ce64025f56d87f47936939981

Observation fea12921-e291-4374-9924-f2b0efdd959a · outbound

This paper cites One molecular fingerprint to rule them all: drugs, biomolecules, and the metabolome.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks One molecular fingerprint to rule them all: drugs, biomolecules, and the metabolome

Reference 47

Resolution
verified fuzzy
raw_fallback, observed 2026-08-15T21:00:32.095159Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.

source=pdf_text observed=2026-08-15T21:00:32.019422Z digest=sha256:ba2aafce89685a9d5eeff71e1fe5e72a882d5f8fab060f30f6aabfa164a0c650

Observation a6b41b0f-1a66-4af3-9a3d-6b9db9e3d8e8 · outbound

This paper cites Modeling relational data with graph convolutional networks.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Modeling relational data with graph convolutional networks

Reference 48

Resolution
unresolved
no resolver link, observed 2026-08-15T21:00:32.023313Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-15T21:00:32.023313Z digest=sha256:c96adac06b3ef4fdaf4e2f9bd3364f2ae855ca3c32194dace4f3b8d15de8e48d

Observation 0d4b191a-06b2-4a64-9186-95bf8c6db91d · outbound

This paper cites Composition-based Multi-Relational Graph Convolutional Networks.

VitaGraph: Building a Knowledge Graph for Biologically Relevant Learning Tasks Composition-based Multi-Relational Graph Convolutional Networks

Reference 49

Resolution
unresolved
no resolver link, observed 2026-08-15T21:00:32.026817Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-15T21:00:32.026817Z digest=sha256:7c9674e45e7bce4ee7d464e42a3e4379b9e2b176d6bcd770e454007c8f3d7860

Pith citing papers

No inbound Pith citation observations are available.