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Paper Citation Record · LEDGER

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models

As of 19 August 2026, this Paper Citation Record lists 70 of 70 outbound references and 0 inbound Pith citation observations for arXiv:2506.04303.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2506.04303 v1

Coverage vector

measured 70 of 70 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-07T10:52:07.123692Z

measured 70 of 70 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-19T06:32:44.657259+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

70 of 70 outbound references displayed

  • verified exact0
  • verified fuzzy39
  • unresolved31
  • parse uncertain0
  • malformed identifier0
  • metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation eab2b6cc-123a-4ce0-9aee-4fd43e155370 · outbound

This paper cites Fatumo, T.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Fatumo, T

Reference 1

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.746754Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.933040Z digest=sha256:bec6c989994e6719e96e228f3670a4548a90d51be2668ee7d2eb5387ad7cd187

Observation 751f9a20-3ec0-4d92-a794-1e0377ea4ea3 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 2

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.738460Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.936658Z digest=sha256:ce8dc0ba8467a0fccad2eea271bd525f801a4bcb5617d1b69dd03370135bfccf

Observation 6117c68b-3cd2-4c9f-940a-971e1dd7c5c1 · outbound

This paper cites Kolligundla, K.M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Kolligundla, K.M

Reference 3

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.730054Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.939700Z digest=sha256:4541ac0cc01eb60856d50d17537cf9766107fc197af3b380ab47deff572f78e0

Observation 4b16f283-7c0a-47ce-8cab-28dfebcfe582 · outbound

This paper cites Houtekamer, M.C.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Houtekamer, M.C

Reference 4

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.722012Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.942958Z digest=sha256:578d5bef7ebbb47f93313ac621b71a680cf102854cf9947b7c616227024e7b53

Observation 22540dde-7c03-4c0f-9f41-c6cffd1a2249 · outbound

This paper cites Zhou, J.G.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Zhou, J.G

Reference 5

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.713347Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.946374Z digest=sha256:7ee9d59211af2b4c4bfe15266edfc0b76f36471ad587414b65fd7410b7821a29

Observation d8843750-8b6d-43a9-b15b-d1dad67285bf · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 6

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.704795Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.949620Z digest=sha256:7b40419dbaf9eb31082027fcfbeae45e2e7942a1ee218d3118368ae36162b725

Observation b3c89623-a77f-4d90-a111-d9a9fdd17209 · outbound

This paper cites Hoang, C.H.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Hoang, C.H

Reference 7

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.696229Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.952829Z digest=sha256:4aa6ce33cde20ef28c26b44c4a1525d5e7bbed10b2e818f94338fdb44a3c7ae3

Observation 24661653-8ad6-49db-b543-af066c978995 · outbound

This paper cites Pickrell, J.C.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Pickrell, J.C

Reference 8

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.687811Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.955590Z digest=sha256:249ff2a10f1b5a1cc8b5e0b606e77ac99a7e280954f9d2712f73c580ad33cc59

Observation 411bf383-d280-4791-9188-92380f2ca9d5 · outbound

This paper cites Parekh, Y.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Parekh, Y

Reference 9

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.679242Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.958257Z digest=sha256:959cfaf8dafe204a6a5e7e3dfaec7d9c1fe22e9386194f05af313d9e9201975e

Observation 4ed88900-6652-4623-b316-d83859a69738 · outbound

This paper cites Lazzarotto, N.L.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Lazzarotto, N.L

Reference 10

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.671089Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.960974Z digest=sha256:1383e6856a7f137494bb0423290a6b3a183f6272c72606d2836975a0779e82ee

Observation 08f77746-03af-4e98-85b5-d4121f0c2e6e · outbound

This paper cites Kumar, S.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Kumar, S

Reference 11

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.662895Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.963507Z digest=sha256:4ee84a2f8b8b81dde7d539a53420b6a732abc389c95d15236c78b7211494336b

Observation 43e47623-f1d0-4e7b-8814-4a1210ca843a · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 12

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.654905Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.966247Z digest=sha256:23e3e42bb662000c1c58d3bdbb9ad0551f7a8ee008544b68c3b074c0ee81c7e8

Observation 1338a401-ebe6-476b-9658-c1ce075c7b7f · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 13

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.646703Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.969026Z digest=sha256:fdf5f82f334168962c1c2d086d51e8d685d242ca4f4c5761dece6156ed50b5c7

Observation a6a28a36-d0b7-4a2b-8c86-4d26639e520e · outbound

This paper cites Chang, M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Chang, M

Reference 14

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.639078Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.971533Z digest=sha256:0c2d21406c3ea93f4f0b3d32a5dd02451352247cbb500d1b0db1fcec73e2103c

Observation 74051419-f93e-429f-bbf4-30e33fcaf8cc · outbound

This paper cites Subramanian, P.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Subramanian, P

Reference 15

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.631316Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.974179Z digest=sha256:38fbcd7ba868ad4918976504852598e8807e1ef490bdd7d3ab968d4ea17bec39

Observation 72611a54-17d9-4e7f-ab67-dd2e7e2a8b36 · outbound

This paper cites Liu, F.F.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Liu, F.F

Reference 16

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.623442Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.976943Z digest=sha256:3ec0a6efbc0b6d6814196b399bebe2f323038e13a2c56f17a93a6669d3177bb8

Observation 9c34ecb1-1144-40ff-a431-ff5b9a7b4be5 · outbound

This paper cites Raudvere, L.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Raudvere, L

Reference 17

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.615795Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.979544Z digest=sha256:d9455b5948849018be80e961c44d8633d4b592808c668c589fcd80e24e189a3e

Observation b74c8112-d166-466e-bafb-0bd2eeb135b6 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 18

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.607948Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.982397Z digest=sha256:d0ae526a365c480884ba3dc542b0fc9eca551e5d420c44bd7ecae17a66473a98

Observation 2441987a-dde6-4426-8610-707a78e9ff7a · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 19

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.599979Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.984963Z digest=sha256:669bf7f6c5cdf9ef0912a13583c716520e0709e73a1c1155fb3bc7a58a6b0e8b

Observation 53b52ffa-d485-4b53-8199-1e4875bbf734 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 20

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.591559Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.987543Z digest=sha256:b92ef166f773675e7da455570be1afb4c19e5add28b7c62acb8a63c9548ce6c1

Observation 67590e99-2cb0-4cef-abd0-26456c21e934 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 21

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.583220Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.990461Z digest=sha256:66df5ac8bff2d3683d5665876f28b6aa4aad6879d5f81641c00841aaec98059b

Observation 1a397366-502c-43b3-bd20-323cd3521643 · outbound

This paper cites GeneAgent: Self-verification Language Agent for Gene Set Knowledge Discovery using Domain Databases.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models GeneAgent: Self-verification Language Agent for Gene Set Knowledge Discovery using Domain Databases

Reference 22

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:06.993086Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:06.993086Z digest=sha256:3fc6fac618ac68eefa531ed0c5d2c3f66ef5ddadc3d423faebb99e3c9c56c84e

Observation eb9dbc84-de42-4cee-be14-fb8bb4e48862 · outbound

This paper cites Aravind, Guilt by association: contextual information in genome analysis.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Aravind, Guilt by association: contextual information in genome analysis

Reference 23

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.574609Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.996082Z digest=sha256:bee51248d1fd5235475ae96b26c0820f936a560487a663c5d1b75ce9f3fa0831

Observation 877be535-3c6f-4c92-9830-6da8633bcd61 · outbound

This paper cites Mooney, J.T.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Mooney, J.T

Reference 24

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.565531Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:06.998952Z digest=sha256:d9e792676fd1ae8e15d2dea32a0470d5f9e7ed00e2428101d42bdd17c14f7d38

Observation 50f0eb36-8f6a-480f-b43f-f19621335da0 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 25

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.556874Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.001526Z digest=sha256:8875a845744ee20475a33f1d1e92891590ce31ed32fe4d3f0e1f084ddf809b48

Observation 68a530fa-c545-4510-bfc0-4e7fecbd67ae · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 26

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.548883Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.004482Z digest=sha256:3579e037734944016bf47c723ea4725a6df0ebdc3fb90619e1414b7a4c3227ef

Observation 7e58ac97-b0a6-47c1-a99a-ebe23c9dbe3c · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 27

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.540497Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.007372Z digest=sha256:b14ce990158ca2dfc29ca694d790100f6b9ccec7833c5cd43cd920c44f61b7b3

Observation 73510a82-8a20-4056-b969-b29ce66d523a · outbound

This paper cites Romanovsky, K.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Romanovsky, K

Reference 28

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.531924Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.010413Z digest=sha256:a4e43abbda6b704a1d249bace1ed1bd50b3abe2dfa3e64b361bd12cd665ca599

Observation a827951f-9d28-4b77-9980-c63e987a3f93 · outbound

This paper cites Eisfeld, S.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Eisfeld, S

Reference 29

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.523350Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.013259Z digest=sha256:81f90e248b6359a541b217eac10ca97faf30a8f828954c476918e580b5a3929c

Observation 6587f4e2-378b-474e-9f46-103716e2cf27 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 30

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.513943Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.016152Z digest=sha256:5e4b7f624f116505d897492d72af700dedf686d476069e5b7bc677dc8dc67bd9

Observation ac282b93-3498-4649-928e-cdd6606e45ed · outbound

This paper cites Hirsch, S.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Hirsch, S

Reference 31

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.505455Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.018917Z digest=sha256:ac3884dda4a35f541e30a7d85c8fda91375bf43b1f277ff2a0fabdba99397a45

Observation ecff437b-ff2d-4b75-b686-76cc690390ed · outbound

This paper cites Bassez, H.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Bassez, H

Reference 32

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.496261Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.021542Z digest=sha256:36eadad31ea2eadfdaa2164ac0b980742055d3bfe83a710bf193168e31e99ac6

Observation ea78aed8-9e1a-4cd1-9a5c-97d0509e3965 · outbound

This paper cites Mering, M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Mering, M

Reference 33

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.487676Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.024268Z digest=sha256:8bdacc8a2cddfff69a4d7076407b667bd0df74e609ac4fb5242605d3f98d8879

Observation 3a6edbbb-9a02-4a51-afc4-33f5b7c46830 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 34

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.478910Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.026977Z digest=sha256:2d368aeac409b108720f9232e1120b163cb86dd69e884b62d97cab2422346064

Observation 3bee5951-80cb-47fc-b7b3-2a2e483521eb · outbound

This paper cites GPT-4o System Card.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models GPT-4o System Card

Reference 35

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:07.029528Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:07.029528Z digest=sha256:16d07b52ac09821b66366494918728acb04dc9999c5bea85ca8c364dbb62a4df

Observation ec2e8563-3492-4315-809e-b3510519c77e · outbound

This paper cites Jayakrishnan, M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Jayakrishnan, M

Reference 36

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.470369Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.032515Z digest=sha256:9b5745f0b95fef6b6cb7d524c4a080370f2c5ca911358291882be395f1738841

Observation 4c39b1fc-afd7-4d75-a2f0-a6b3b24b9fc9 · outbound

This paper cites Porcu, M.C.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Porcu, M.C

Reference 37

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.461509Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.035350Z digest=sha256:7d764f3b2ff9d0bf996f6ef8250d5cc6a28c11a8c46fa8c2feff6eb77f904f07

Observation c6a7030c-b9c5-4421-82c3-2370aa7fc553 · outbound

This paper cites GPT-4 Technical Report.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models GPT-4 Technical Report

Reference 38

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:07.037911Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:07.037911Z digest=sha256:4371eee44608cb324a4a2f74ef84da9198734cbf9dda49e9f3d0ecf0a2f1a0fa

Observation 35820cca-a0df-4df9-86d7-65aa6630df4b · outbound

This paper cites The Llama 3 Herd of Models.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models The Llama 3 Herd of Models

Reference 39

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:07.040618Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:07.040618Z digest=sha256:caaa1fa1bc7feb420003cf418edb88413cee402bc4f8463a191965122b4bdd42

Observation ce7aefaa-5e78-4265-b5bd-050a1a5c4ea8 · outbound

This paper cites Joachimiak, J.H.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Joachimiak, J.H

Reference 40

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.453353Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.043304Z digest=sha256:f95021e3f85757a6d5d22caf903aeea7776525f536e5b2d615b144e6b83f9152

Observation ba0a6b09-4613-4c80-a2cd-b48519d9a5af · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 41

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.444835Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.046136Z digest=sha256:92222945401b49aadf51b7cdbb69ebe634ed7197712739b5160c3839ffa46249

Observation 0931df51-f65d-4cd8-9e56-5ad9d1cd0d54 · outbound

This paper cites Tanaka, M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Tanaka, M

Reference 42

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.436938Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.048674Z digest=sha256:95fbaa4fb2b07956cd9d747ff906a0933a73953cc9c7083965437c1370fac763

Observation 35ff1bc3-8b85-4f4a-ac53-a7d447bde5b3 · outbound

This paper cites Rambow, A.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Rambow, A

Reference 43

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.428694Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.051331Z digest=sha256:ab22f39aec2044907020630303526269c9c2d2589adb044a019c8e029fe15248

Observation 22811249-07fe-4e8d-9872-f9dd3d66c29a · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 44

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.419872Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.054073Z digest=sha256:6966b8198dfa8f8e1f197ee120d6bb3e2cfcc6f263e968c92392f8aa13b3c495

Observation 258f1c36-e779-4390-b144-08a03704110b · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 45

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.411436Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.056939Z digest=sha256:fe4220169b0f4ef4aac2d4b49b2d72d0f38d84b387a1ed98ca76a11a0336c3eb

Observation 0d4ecf6a-e591-4937-8093-9ee57467a788 · outbound

This paper cites Griffiths, P.A.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Griffiths, P.A

Reference 46

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.402730Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.059408Z digest=sha256:506c2eee920c7b0cf4e90f79eb1d3acf2dfb995fdd7425f5086b2a22b1ab50cd

Observation 691a53c9-b460-4287-a73a-6ee7c936a5d9 · outbound

This paper cites Goenka, F.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Goenka, F

Reference 47

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.394575Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.062065Z digest=sha256:3cf0bf1558ef08517eccd624c3da8ae1978626cd2037da48a3e70dc2b938e61c

Observation fd01fca6-1912-4261-aa9d-212fa51103bd · outbound

This paper cites Böttcher, E.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Böttcher, E

Reference 48

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.386238Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.064738Z digest=sha256:b8308dd65faca9b056a37acc6d9efcfb95c483ef24c1d917902705a7b1e44e85

Observation ce76a784-9656-46ba-9dfa-9633b36a6ef7 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 49

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.377671Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.067480Z digest=sha256:0e61da1e05e112e05a26d1db24060aa8e0bb4a0f42d410acfcc4dfe9068d36a2

Observation af874769-ca83-4cf0-9ec9-a397fa4b7794 · outbound

This paper cites Habara, Y.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Habara, Y

Reference 50

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.369136Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.070061Z digest=sha256:9c14bf500238574340419ca4e518859c043351492e197959a74d6275da32ce65

Observation e6fe6b3b-557b-4a05-a355-7597bd28c2dc · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 51

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.360185Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.072727Z digest=sha256:e79991f3ed1a8e8a0cc447bfdf3b36372cf9aa11bed92a890a46b626f048bcad

Observation 67a83495-e653-41a2-8edc-b4929d89f19f · outbound

This paper cites McCulloch, G.R.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models McCulloch, G.R

Reference 52

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.351905Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.075462Z digest=sha256:ccfeffbb33316d788f06e271c6d17cccc210351ee802299b8e5daa67d6e88656

Observation a5649570-972e-4323-811d-37e2d2ef0f6d · outbound

This paper cites Jie, C.J.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Jie, C.J

Reference 53

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.342971Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.078372Z digest=sha256:2880b746eea20d04c759f81fa8667e6c2b626bb6832f87c298c51f8f828edb0e

Observation 8af303b1-d9b3-4358-aa74-98bac4dbab9a · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 54

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.334330Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.080960Z digest=sha256:d8aaa5e588f9bbcb039540d03b4058e2f8ab3548e835724fc8b6e227ce4ec0fd

Observation 30701ab6-8787-4c9e-9def-faf516a603cd · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 55

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.325906Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.083659Z digest=sha256:a9b0c26532dc8118a13d317cab6f071edad41d5bf178748a90760e09497cb75d

Observation b51bdda8-6a9d-46af-beca-02ab6b2b5c53 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 56

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.317555Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.086097Z digest=sha256:327beca71e5033a6010d660d673e4eaafff6217bb7bd672361b241adbb4f78d4

Observation e7d46aa5-caa6-4429-81e7-a570e59c475c · outbound

This paper cites Bradley, TNF‐mediated inflammatory disease.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Bradley, TNF‐mediated inflammatory disease

Reference 57

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.309097Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.088633Z digest=sha256:bed19d0e2b6a310497fe8fcc10a43de2bc630baf783e9fd6b2c66d3865130f6a

Observation 3fea77cd-ac2b-4b3f-b09d-263bea05fb64 · outbound

This paper cites Beutler, A.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Beutler, A

Reference 58

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.300909Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.091304Z digest=sha256:b8aeb08ede0547e556583127a876a69c1e4ba86fe0db2fce14fce93266f95eef

Observation ab10fa17-0d83-404a-8c0f-07d8ac50ae88 · outbound

This paper cites Yamamoto, S.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Yamamoto, S

Reference 59

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.292399Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.093800Z digest=sha256:4951e94e1416e206db52a853b23772ad86c6dbb8bfe65c0e7a4b907ea503175b

Observation b217fde1-2f97-4278-9b02-2af1cd12b7cd · outbound

This paper cites Zhu, J.M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Zhu, J.M

Reference 60

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.283509Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.096361Z digest=sha256:5ab953822a65d1743c33efc978d896e45a968795fc0190e482022b0ea770b10f

Observation 6ac6efc7-a4c4-4e15-ba4b-bd613a18ffc4 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 61

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.275162Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.099177Z digest=sha256:350382342057dddba170f9f8bdd2308b2d783b9d024f4caa4de8e8d025dec73f

Observation 91e44ba3-babd-452d-bc9c-80e0e2f93787 · outbound

This paper cites Opportunities and Risks of LLMs for Scalable Deliberation with Polis.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Opportunities and Risks of LLMs for Scalable Deliberation with Polis

Reference 62

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:07.101720Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:07.101720Z digest=sha256:65d34d38fa1d70d1c4fa049170fd26a9ddeac3d653cc1251a595c2d60d02065c

Observation a79480ba-4d89-40f6-a85a-0a73483c067c · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 63

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.266113Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.104544Z digest=sha256:e93b9ea9d762c27b2f2b3d6e38d88ada94d087e903a2ed616ca265fe2dcd5136

Observation 3217b7ec-2ddc-49e0-af63-22ef3c766e88 · outbound

This paper cites Abbasi Yadkori, I.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Abbasi Yadkori, I

Reference 64

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.257623Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.107231Z digest=sha256:f7445b99a238465fddb442b69d9898150d7e6e0574a8890a2c29d9440083bed8

Observation 1630f15b-55d4-4c7d-ace8-a6cab24444e1 · outbound

This paper cites Azure OpenAI in Azure AI Foundry Models [Internet].

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Azure OpenAI in Azure AI Foundry Models [Internet]

Reference 65

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.248107Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.110138Z digest=sha256:d5d71441dc20d51d186129d3d452ee7aa7e6bdf673dbad2240d30cd6135faa7f

Observation f3f7c2f3-f749-4db7-890f-44083b0b83b0 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 66

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.238413Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.112804Z digest=sha256:8c45de8dca6b110df96bbd1bcb1144e9bd7c7ba19d51c8b427b2a5dd5123c6ca

Observation e165d2a0-7d0c-47a7-a1ef-8132f5d1d04f · outbound

This paper cites Razin, E.S.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Razin, E.S

Reference 67

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.229489Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.115368Z digest=sha256:7986ff84a54d46e8f298d496ddf5a4621c9e027abf8c34191927be38deac331c

Observation ac829ed4-d2b2-45b1-bf61-441a594c6bdc · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 68

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.220529Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.118144Z digest=sha256:f97008fba5965a603b63f70f153dad24b723cbedf9d6d4419078ee82616de214

Observation 0851820e-c76a-4c1a-a440-e03f06afcae3 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 69

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.211658Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.120963Z digest=sha256:566cb8eec2a445c673d5b55f1a43204b064f430ec7c3017b98d3db1947e7335c

Observation 8b6cbf0f-9f41-44d0-970c-af4e05444a45 · outbound

This paper cites **” indicates a significant improvement with p < 0.01, while “ *.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models **” indicates a significant improvement with p < 0.01, while “ *

Reference 70

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.202109Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

source=pdf_text observed=2026-08-07T10:52:07.123692Z digest=sha256:603a433693d689d2c458fb8d99275efb319dc8d2f2ed3594740eef01993325ba

Pith citing papers

No inbound Pith citation observations are available.