Typed states for the displayed outbound observations.
Source: paper_references, paper_reference_links, observed 2026-08-07T04:08:42.035687Z
Paper Citation Record · LEDGER
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics
As of 20 August 2026, this Paper Citation Record lists 68 of 68 outbound references and 0 inbound Pith citation observations for arXiv:2506.11491.
A citation records a reference. It does not transfer a finding from one paper to another.
Coverage vector
One-hop event checks from named stored sources.
Source: scholarly_work_events, retraction_status_cache, observed 2026-08-20T06:33:59.587034+00:00
Pith citing papers itemized under the disclosed page cap.
Source: paper_references, paper_reference_links
A source-named dated measurement, never combined with another source.
Source: cited_works
Reference resolution
68 of 68 outbound references displayed
- verified exact0
- verified fuzzy63
- unresolved5
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- malformed identifier0
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External citation measurements
No source-named external measurement is stored.
Outbound references
Observation a73a80fa-4729-4e07-a1b1-1d3f4d6346bd · outbound
This paper cites An introduction to spatial transcriptomics for biomedical research.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics An introduction to spatial transcriptomics for biomedical research
Reference 1
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:09:01.678808Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation c9dd65db-9efa-4ce1-bbf2-02d7bdebbe00 · outbound
This paper cites Holt and Simon L.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Holt and Simon L
Reference 2
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:09:01.409660Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 467db7cd-c848-4f4a-a4dc-4ee5bafad795 · outbound
This paper cites Single-cell in situ rna profiling by sequential hybridization.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Single-cell in situ rna profiling by sequential hybridization
Reference 3
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:09:00.473044Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 7a57b7cf-7adc-4957-998e-684ec5edaa7f · outbound
This paper cites Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex
Reference 4
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:09:00.249797Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 8c32a79e-0b65-4125-92b3-e1def4b892db · outbound
This paper cites Rnaimaging.
Reference 5
- Resolution
- verified fuzzy
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 9c429e79-61e4-4bc9-b93d-ac16d0e0b050 · outbound
This paper cites Three-dimensional intact-tissue se- quencing of single-cell transcriptional states.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Three-dimensional intact-tissue se- quencing of single-cell transcriptional states
Reference 6
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:59.758690Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 0e0538ca-1000-41f5-84cb-2be115dcbea9 · outbound
This paper cites Transcriptome-scale super-resolved imaging in tissues by rna seqfish+.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Transcriptome-scale super-resolved imaging in tissues by rna seqfish+
Reference 7
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:59.470983Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 304f491f-efc9-4ccb-8001-7093459a8e17 · outbound
This paper cites Visualization and analysis of gene expression in tissue sections by spatial transcriptomics.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Visualization and analysis of gene expression in tissue sections by spatial transcriptomics
Reference 8
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:59.217334Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 58eff9b9-f0cd-4aef-8452-ffa19467f3f4 · outbound
This paper cites Highly sensitive spatial transcriptomics at near-cellular resolution with slide-seqv2.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Highly sensitive spatial transcriptomics at near-cellular resolution with slide-seqv2
Reference 9
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:58.966958Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation beb5c736-7c39-40d2-8ce6-0cf9b3a50c6a · outbound
This paper cites High- definition spatial transcriptomics for in situ tissue profiling.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics High- definition spatial transcriptomics for in situ tissue profiling
Reference 10
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:58.703515Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 0fc307f3-daa3-4466-81ed-cadd94ba5376 · outbound
This paper cites Laser-capture microdissection.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Laser-capture microdissection
Reference 11
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:58.473389Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 24141a28-1963-4d77-87dc-315b389ed0c9 · outbound
This paper cites Spatial recon- struction of single-cell gene expression data.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Spatial recon- struction of single-cell gene expression data
Reference 12
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:58.208139Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 22496180-fe7d-4782-a9f4-f32856d5e8d1 · outbound
This paper cites Giotto: a toolbox for integrative analysis and visualization of spatial expression data.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Giotto: a toolbox for integrative analysis and visualization of spatial expression data
Reference 13
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:58.043043Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 03f6497e-ca66-47db-8dbd-06291efc60f0 · outbound
This paper cites Spagcn: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Spagcn: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network
Reference 14
- Resolution
- unresolved
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Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 99f39ac1-1aa6-4373-8a7e-66d8e8ef28fc · outbound
This paper cites Deepst: identifying spatial domains in spatial transcriptomics by deep learning.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Deepst: identifying spatial domains in spatial transcriptomics by deep learning
Reference 15
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:55.832243Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 5f29b65c-5d50-4518-83a6-6a7234e1b565 · outbound
This paper cites Deciphering spatial domains from spatially resolved transcriptomics with an adaptive graph attention auto-encoder.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Deciphering spatial domains from spatially resolved transcriptomics with an adaptive graph attention auto-encoder
Reference 16
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:55.152883Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation adbd0367-3384-469e-bb0a-4c329a06baad · outbound
This paper cites Unsupervised spatially embedded deep representation of spatial transcriptomics.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Unsupervised spatially embedded deep representation of spatial transcriptomics
Reference 17
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:54.954327Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 7ccd5671-eb51-49ee-aabb-c62cbf1331af · outbound
This paper cites Robust mapping of spatiotemporal trajectories and cell–cell interactions in healthy and diseased tissues.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Robust mapping of spatiotemporal trajectories and cell–cell interactions in healthy and diseased tissues
Reference 18
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:54.708735Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 89366aee-e37a-495c-8d16-421ae0588f3a · outbound
This paper cites Spatially informed clustering, integra- tion, and deconvolution of spatial transcriptomics with graphst.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Spatially informed clustering, integra- tion, and deconvolution of spatial transcriptomics with graphst
Reference 19
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:54.475030Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 5b060797-8885-4d2f-a170-a60e36d134ed · outbound
This paper cites const: an interpretable multi-modal contrastive learning framework for spatial transcriptomics.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics const: an interpretable multi-modal contrastive learning framework for spatial transcriptomics
Reference 20
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:54.262776Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 94d4df45-35be-4ddb-a263-2d68dcf4ea73 · outbound
This paper cites Deep graph infomax.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Deep graph infomax
Reference 21
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:54.038052Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation e984ad4f-a4bb-48f5-8872-1af637ff5da3 · outbound
This paper cites Sgcast: symmetric graph convolutional auto-encoder for scalable and accurate study of spatial transcriptomics.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Sgcast: symmetric graph convolutional auto-encoder for scalable and accurate study of spatial transcriptomics
Reference 22
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:53.829548Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation f539884a-c61d-4632-8e4f-bbbe8362d12d · outbound
This paper cites nearest neighbor.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics nearest neighbor
Reference 23
- Resolution
- unresolved
- no resolver link, observed 2026-08-07T04:08:35.925096Z
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation cdfdc974-81bf-426d-8e2f-9711a23d20c7 · outbound
This paper cites Museum of spatial transcriptomics.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Museum of spatial transcriptomics
Reference 24
- Resolution
- unresolved
- no resolver link, observed 2026-08-07T04:08:36.067838Z
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 3b34e537-8429-4f6d-8dcb-a1f8d89c8ac8 · outbound
This paper cites Computational methods for alignment and integration of spatially resolved transcriptomics data.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Computational methods for alignment and integration of spatially resolved transcriptomics data
Reference 25
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:53.614238Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation de3995aa-0b02-4ba5-ac5f-d8d744dbeae4 · outbound
This paper cites Computational principles and challenges in single-cell data integration.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Computational principles and challenges in single-cell data integration
Reference 26
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:53.343145Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 3bfad964-8983-4fad-b9a7-344e8daef931 · outbound
This paper cites Fast, sensitive and accurate integration of single-cell data with harmony.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Fast, sensitive and accurate integration of single-cell data with harmony
Reference 27
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:53.176094Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 2a8aaff8-7acd-41a7-aa9a-a73fe254479c · outbound
This paper cites Deep generative modeling for single-cell transcriptomics.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Deep generative modeling for single-cell transcriptomics
Reference 28
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:52.938232Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation c860f385-e587-44b4-9ac7-b8b130b2d0c9 · outbound
This paper cites Deep mincut: Learning node embeddings by detecting communities.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Deep mincut: Learning node embeddings by detecting communities
Reference 29
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:52.727279Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation fc78f9ec-5188-4da0-b057-292151e6b756 · outbound
This paper cites Review of brain functioning in depression for semantic processing and verbal fluency.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Review of brain functioning in depression for semantic processing and verbal fluency
Reference 30
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:52.478283Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 94bcc254-6eda-4f9a-abe5-f8e5061733e7 · outbound
This paper cites Large-scale exome sequencing study implicates both developmental and functional changes in the neurobiology of autism.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Large-scale exome sequencing study implicates both developmental and functional changes in the neurobiology of autism
Reference 31
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:52.272464Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation b8b980e7-5c5b-48ca-a850-90ff42c86852 · outbound
This paper cites Common schizophrenia alleles are enriched in mutation-intolerant genes and in regions under strong background selection.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Common schizophrenia alleles are enriched in mutation-intolerant genes and in regions under strong background selection
Reference 32
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:52.036614Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 071743ad-49fb-4877-bb66-8fd5e2580663 · outbound
This paper cites Genome-wide association study identifies 30 loci associated with bipolar disorder.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Genome-wide association study identifies 30 loci associated with bipolar disorder
Reference 33
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:51.804075Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation b7123c9e-ae22-4f50-816f-0aa5bd6dd676 · outbound
This paper cites Fast unfold- ing of communities in large networks.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Fast unfold- ing of communities in large networks
Reference 34
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:51.602659Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 372bafbd-f33c-453f-83f3-1281c0131479 · outbound
This paper cites Neurogranin enhances synaptic strength through its interaction with calmodulin.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Neurogranin enhances synaptic strength through its interaction with calmodulin
Reference 35
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:51.397939Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 6a821cd1-3cec-47de-8af5-4162dea82133 · outbound
This paper cites Association between nrgn gene polymorphism and resting-state hippocampal functional connectivity in schizophrenia.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Association between nrgn gene polymorphism and resting-state hippocampal functional connectivity in schizophrenia
Reference 36
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:51.213736Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 1b4244c0-2f50-4eb7-8616-771711b66090 · outbound
This paper cites Expression of c1ql3 in discrete neuronal populations controls efferent synapse numbers and diverse behaviors.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Expression of c1ql3 in discrete neuronal populations controls efferent synapse numbers and diverse behaviors
Reference 37
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:51.001418Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation d343c020-2dad-4dd3-a070-f96486133e3f · outbound
This paper cites Neurod6 expression defines new retinal amacrine cell subtypes and regulates their fate.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Neurod6 expression defines new retinal amacrine cell subtypes and regulates their fate
Reference 38
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:50.790979Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 855c492d-a325-4562-84cf-32dbb9e42bb3 · outbound
This paper cites An rna-sequencing transcriptome and splicing database of glia, neurons, and vascular cells of the cerebral cortex.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics An rna-sequencing transcriptome and splicing database of glia, neurons, and vascular cells of the cerebral cortex
Reference 39
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:50.571877Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 550e93b0-f2c0-4369-a3f4-762889a3a131 · outbound
This paper cites Purification and characteriza- tion of progenitor and mature human astrocytes reveals transcriptional and functional differences with mouse.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Purification and characteriza- tion of progenitor and mature human astrocytes reveals transcriptional and functional differences with mouse
Reference 40
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:50.319135Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation f4414ead-07cf-4f14-b280-3803ab30c1dd · outbound
This paper cites Spatiotemporal transcriptomic atlas of mouse organogenesis using dna nanoball-patterned arrays.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Spatiotemporal transcriptomic atlas of mouse organogenesis using dna nanoball-patterned arrays
Reference 41
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:50.076528Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 394918f8-29de-458e-a759-5d04b762ad0e · outbound
This paper cites Gene expression profiling of atp-binding cassette (abc) transporters as a predictor of the pathologic response to neoadjuvant chemotherapy in breast cancer patients.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Gene expression profiling of atp-binding cassette (abc) transporters as a predictor of the pathologic response to neoadjuvant chemotherapy in breast cancer patients
Reference 42
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:49.905554Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 8f32a1c1-d38c-4538-b81d-0c5bfad2f319 · outbound
This paper cites Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response
Reference 43
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:49.643417Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 2afb12bd-fb7a-4562-8ae1-dfb143a67ae5 · outbound
This paper cites The emerging role of xbp1 in cancer.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics The emerging role of xbp1 in cancer
Reference 44
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:49.397860Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 27084cb0-71e2-40fb-9f5b-f3253731f932 · outbound
This paper cites Prognostic impact of agr3 protein expression in breast cancer: A systematic review and meta-analysis.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Prognostic impact of agr3 protein expression in breast cancer: A systematic review and meta-analysis
Reference 45
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:49.203776Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation da1d7ab0-a1ae-4b48-a249-3a248cc0efdd · outbound
This paper cites The biomarker he4 (wfdc2) promotes a pro-angiogenic and immunosuppressive tumor microenvironment via regulation of stat3 target genes.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics The biomarker he4 (wfdc2) promotes a pro-angiogenic and immunosuppressive tumor microenvironment via regulation of stat3 target genes
Reference 46
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:48.992165Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation e9b58726-f7b2-4018-9114-ed76c4eefe30 · outbound
This paper cites Molecular portraits of human breast tumours.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Molecular portraits of human breast tumours
Reference 47
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:48.754731Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation ca35c4a7-2030-4184-995f-8238f5911e08 · outbound
This paper cites Tissue-based map of the human proteome.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Tissue-based map of the human proteome
Reference 48
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:48.559039Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation cfc895ad-88ce-4d11-a732-e75a2b21086b · outbound
This paper cites Aebp1 con- tributes to breast cancer progression by facilitating cell proliferation, migration, invasion, and blocking apoptosis.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Aebp1 con- tributes to breast cancer progression by facilitating cell proliferation, migration, invasion, and blocking apoptosis
Reference 49
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:48.377034Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 57674a53-cdac-4a08-99b5-b5d6125c8d3b · outbound
This paper cites High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis
Reference 50
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:48.226355Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation e1b325b2-3c0f-4335-b80e-1793c1bbb9be · outbound
This paper cites Accurate and efficient integrative reference-informed spatial domain detection for spatial transcriptomics.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Accurate and efficient integrative reference-informed spatial domain detection for spatial transcriptomics
Reference 51
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:48.008477Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 868ff6dc-28cc-48b8-b0c7-94c58402f7de · outbound
This paper cites Banksy unifies cell typing and tissue domain segmen- tation for scalable spatial omics data analysis.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Banksy unifies cell typing and tissue domain segmen- tation for scalable spatial omics data analysis
Reference 52
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:47.794205Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 2d4a5d24-6cb0-47ea-a94e-9719d853c336 · outbound
This paper cites Ductal carcinoma in situ: molecular changes accompanying disease progression.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Ductal carcinoma in situ: molecular changes accompanying disease progression
Reference 53
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:47.590325Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation fea1ee16-bfc2-47bf-bb6f-5318e825c317 · outbound
This paper cites Ceacam5 and ceacam6 are major target genes for smad3-mediated tgf-β signaling.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Ceacam5 and ceacam6 are major target genes for smad3-mediated tgf-β signaling
Reference 54
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:47.358747Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 97f32a2a-7405-4cad-9d35-52edf005b766 · outbound
This paper cites Tumor-associated myoepithelial cells promote the invasive progression of ductal carci- noma in situ through activation of tgfβ signaling.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Tumor-associated myoepithelial cells promote the invasive progression of ductal carci- noma in situ through activation of tgfβ signaling
Reference 55
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:47.188146Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation a2520348-daae-4021-9d22-bf9cc00f9e3e · outbound
This paper cites Mann-whitney u test.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Mann-whitney u test
Reference 56
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:46.917492Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 0f7c7ddb-1d5a-45c4-8f5c-bade6e5d451c · outbound
This paper cites Foxc2 expres- sion links epithelial–mesenchymal transition and stem cell properties in breast cancer.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Foxc2 expres- sion links epithelial–mesenchymal transition and stem cell properties in breast cancer
Reference 57
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:46.708529Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 3dced330-b107-47a2-924d-0dcf10fc0134 · outbound
This paper cites Allen brain atlas, 2006.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Allen brain atlas, 2006
Reference 58
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:46.460206Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 7b84fce8-0716-4a08-a5dc-02e4e77258d1 · outbound
This paper cites Defining cell types and states with single-cell genomics.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Defining cell types and states with single-cell genomics
Reference 59
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:46.247530Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 55be9aa4-90f7-4239-90d1-c2498a8d4da2 · outbound
This paper cites Cancer statistics, 2024.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Cancer statistics, 2024
Reference 60
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:46.003508Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 0a534b3c-0b69-446e-949a-648ea395ab76 · outbound
This paper cites Scanpy: large-scale single-cell gene expression data analysis.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Scanpy: large-scale single-cell gene expression data analysis
Reference 61
- Resolution
- unresolved
- no resolver link, observed 2026-08-07T04:08:41.334097Z
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 03c7f04a-b648-4d12-9095-a3396811c400 · outbound
This paper cites GraphMixup: Improving Class-Imbalanced Node Classification on Graphs by Self-supervised Context Prediction.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics GraphMixup: Improving Class-Imbalanced Node Classification on Graphs by Self-supervised Context Prediction
Reference 62
- Resolution
- unresolved
- no resolver link, observed 2026-08-07T04:08:41.453562Z
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 07d11a19-66ff-4c90-9349-d88847b3201f · outbound
This paper cites Neural machine translation with gumbel-greedy decoding.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Neural machine translation with gumbel-greedy decoding
Reference 63
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:45.303491Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 245c9e3e-c9ca-44f4-9249-0ebf265dd909 · outbound
This paper cites Adam: A method for stochastic optimization.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Adam: A method for stochastic optimization
Reference 64
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:44.741401Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation cdce9191-e01c-4e4f-89f7-fe168c0350b5 · outbound
This paper cites mclust version 4 for r: normal mixture modeling for model-based clustering, classification, and density estimation.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics mclust version 4 for r: normal mixture modeling for model-based clustering, classification, and density estimation
Reference 65
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:44.504580Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation e6f4e693-eaf7-449e-8e4b-9ec797c39b3e · outbound
This paper cites Paga: graph abstraction reconciles clustering with trajectory inference through a topology preserving map of single cells.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Paga: graph abstraction reconciles clustering with trajectory inference through a topology preserving map of single cells
Reference 66
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:44.266141Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 1d2a9298-c795-48c0-8a20-6e297809982c · outbound
This paper cites Alignment and integration of spatial transcriptomics data.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Alignment and integration of spatial transcriptomics data
Reference 67
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:44.001785Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Observation 0cbcc8e8-9c51-4497-a383-296b47610df3 · outbound
This paper cites Inductive representation learning on large graphs.
SemanticST: Spatially Informed Semantic Graph Learning for Clustering, Integration, and Scalable Analysis of Spatial Transcriptomics Inductive representation learning on large graphs
Reference 68
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-07T04:08:43.346308Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-20T06:33:59.587034+00:00.
Pith citing papers
No inbound Pith citation observations are available.