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Paper Citation Record · LEDGER

Unraveling the Potential of Diffusion Models in Small Molecule Generation

As of 15 August 2026, this Paper Citation Record lists 92 of 92 outbound references and 0 inbound Pith citation observations for arXiv:2507.08005.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2507.08005 v1

Coverage vector

measured 92 of 92 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-06T23:01:11.725787Z

measured 92 of 92 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-15T06:32:42.880941+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

92 of 92 outbound references displayed

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External citation measurements

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Outbound references

Observation ff5e8d87-2f9b-4816-be72-f50fa830623a · outbound

This paper cites an unresolved cited work.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Unresolved cited work

Reference 1

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Observation d12c1275-e709-4b5d-a845-03734ff2889e · outbound

This paper cites The process of structure-based drug design.

Unraveling the Potential of Diffusion Models in Small Molecule Generation The process of structure-based drug design

Reference 2

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Observation d89ef177-0541-41fc-8557-24d10cfe7cdc · outbound

This paper cites Geom, energy-annotated molecular conformations for property prediction and molecular gen- eration.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Geom, energy-annotated molecular conformations for property prediction and molecular gen- eration

Reference 3

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Observation 457a32ec-71d9-4ed0-b375-b4a597838acc · outbound

This paper cites Benchmarking structure-based three-dimensional molecular generative models using GenBench3D: ligand conformation quality matters.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Benchmarking structure-based three-dimensional molecular generative models using GenBench3D: ligand conformation quality matters

Reference 4

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Observation a87a0ffa-1ea8-4bc9-9e82-34ba98cfec8b · outbound

This paper cites Quantifying the chemical beauty of drugs.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Quantifying the chemical beauty of drugs

Reference 5

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Observation 1c79379b-b97d-4ef7-a9a1-e5f42f6a9765 · outbound

This paper cites Gua- camol: benchmarking models for de novo molecular design.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Gua- camol: benchmarking models for de novo molecular design

Reference 6

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Observation 24707744-01c5-432c-81b4-3b8942b27444 · outbound

This paper cites Analog bits: Generating discrete data using diffusion models with self-conditioning, in: The Eleventh International Conference on Learning Representations.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Analog bits: Generating discrete data using diffusion models with self-conditioning, in: The Eleventh International Conference on Learning Representations

Reference 7

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Observation f950b33f-5545-4171-b14d-4561d709b311 · outbound

This paper cites Shape- conditioned3dmoleculegenerationviaequivariantdiffusionmodels.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Shape- conditioned3dmoleculegenerationviaequivariantdiffusionmodels

Reference 8

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Observation b868274a-0003-4b77-95dd-2964c61c925c · outbound

This paper cites Ilvr: Conditioning method for denoising diffusion probabilistic models, in: 2021 IEEE/CVF International Conference on Computer Vision (ICCV), IEEE.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Ilvr: Conditioning method for denoising diffusion probabilistic models, in: 2021 IEEE/CVF International Conference on Computer Vision (ICCV), IEEE

Reference 9

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Observation c58ce5d5-9ace-4d55-95df-f571b8e05f3a · outbound

This paper cites Diffdock:Diffusionsteps,twists,andturnsformoleculardocking,in: International Conference on Learning Representations (ICLR 2023).

Unraveling the Potential of Diffusion Models in Small Molecule Generation Diffdock:Diffusionsteps,twists,andturnsformoleculardocking,in: International Conference on Learning Representations (ICLR 2023)

Reference 10

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Observation e9edfc03-5687-46e6-a5bd-852efd489b3a · outbound

This paper cites MolGAN: An implicit generative model for small molecular graphs.

Unraveling the Potential of Diffusion Models in Small Molecule Generation MolGAN: An implicit generative model for small molecular graphs

Reference 11

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Observation d86593df-ab0b-4c4a-8cd6-ec48cc8f682b · outbound

This paper cites Diffusion models beat gans on image synthesis.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Diffusion models beat gans on image synthesis

Reference 12

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Observation 5e84bd65-e4bf-4998-a783-7355f655b8fb · outbound

This paper cites E(3)-equivariant models cannot learn chirality: Field-based molecular generation.

Unraveling the Potential of Diffusion Models in Small Molecule Generation E(3)-equivariant models cannot learn chirality: Field-based molecular generation

Reference 13

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Observation 960ae2f7-ad5f-46dd-9b70-36f123982d08 · outbound

This paper cites Autodock vina 1.2.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Autodock vina 1.2

Reference 14

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Observation 4690e86e-8ab9-4ec9-abc8-1d33692ab767 · outbound

This paper cites Translationbetweenmoleculesandnaturallanguage,in:Proceedings of the 2022 Conference on Empirical Methods in Natural Language Processing, pp.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Translationbetweenmoleculesandnaturallanguage,in:Proceedings of the 2022 Conference on Empirical Methods in Natural Language Processing, pp

Reference 15

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Observation d98da4ed-6445-4e84-a3ef-f7f3ca43b467 · outbound

This paper cites Estimationofsyntheticaccessibility score of drug-like molecules based on molecular complexity and fragment contributions.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Estimationofsyntheticaccessibility score of drug-like molecules based on molecular complexity and fragment contributions

Reference 16

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Observation 2717bf71-7bfc-4e16-8cd9-42f56740c2cd · outbound

This paper cites Three-dimensionalconvolutionalneural networksandacross-dockeddatasetforstructure-baseddrugdesign.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Three-dimensionalconvolutionalneural networksandacross-dockeddatasetforstructure-baseddrugdesign

Reference 17

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Observation 8d7d4fd8-68b1-42be-92ae-77cf932b39ae · outbound

This paper cites Se (3)- transformers: 3d roto-translation equivariant attention networks.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Se (3)- transformers: 3d roto-translation equivariant attention networks

Reference 18

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Observation 307d033e-69ae-4dcb-831e-7b9c96aa30ef · outbound

This paper cites E (n) equivariant normalizing flows.

Unraveling the Potential of Diffusion Models in Small Molecule Generation E (n) equivariant normalizing flows

Reference 19

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Observation 8a048741-ce5c-42f2-9b51-e7a443d35354 · outbound

This paper cites Autoregressive fragment-baseddiffusionforpocket-awareliganddesign,in:NeurIPS 2023 Generative AI and Biology (GenBio) Workshop.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Autoregressive fragment-baseddiffusionforpocket-awareliganddesign,in:NeurIPS 2023 Generative AI and Biology (GenBio) Workshop

Reference 20

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Observation 3c464007-1ed0-46b6-bf3e-73b9b89f5ba3 · outbound

This paper cites Pocketmol: a molecular visualization tool for the pocket pc, in: Proceedings 2nd Annual IEEE International Symposium on Bioinformatics and Bioengineer- ing (BIBE 2001), IEEE.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Pocketmol: a molecular visualization tool for the pocket pc, in: Proceedings 2nd Annual IEEE International Symposium on Bioinformatics and Bioengineer- ing (BIBE 2001), IEEE

Reference 21

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Observation 3be40a91-122e-4f0e-946f-3718b8969f70 · outbound

This paper cites Text-guided molecule generation with diffusion language model, in: Proceedings of the AAAI Conference on Artificial Intelligence, pp.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Text-guided molecule generation with diffusion language model, in: Proceedings of the AAAI Conference on Artificial Intelligence, pp

Reference 22

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Observation 7d024020-2ee2-4c90-8605-16579b905d33 · outbound

This paper cites Aligning target-aware molecule diffusionmodelswithexactenergyoptimization.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Aligning target-aware molecule diffusionmodelswithexactenergyoptimization

Reference 23

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Observation 25402ac1-27b9-4c42-b06a-2453ce5bbb48 · outbound

This paper cites Linkernet: Fragment poses and linker co-design with 3d equivariant diffusion.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Linkernet: Fragment poses and linker co-design with 3d equivariant diffusion

Reference 24

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Observation b188cd53-e7a4-4bd9-b749-466735243383 · outbound

This paper cites 3d equivariantdiffusionfortarget-awaremoleculegenerationandaffinity prediction, in: The Eleventh International Conference on Learning Representations.

Unraveling the Potential of Diffusion Models in Small Molecule Generation 3d equivariantdiffusionfortarget-awaremoleculegenerationandaffinity prediction, in: The Eleventh International Conference on Learning Representations

Reference 25

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Source-reported events for the cited work

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Observation 5c774787-5623-48e9-8e84-a25bc54dd093 · outbound

This paper cites Decompdiff: diffusion models with decomposed priors for structure-based drug design, in: Proceedings of the 40th International Conference on Machine Learning, pp.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Decompdiff: diffusion models with decomposed priors for structure-based drug design, in: Proceedings of the 40th International Conference on Machine Learning, pp

Reference 26

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Observation 279b6afb-d7cb-4329-b40e-1105c5c61152 · outbound

This paper cites Denoising diffusion probabilistic models.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Denoising diffusion probabilistic models

Reference 27

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Observation 8eb7962b-4449-4784-a5bf-af9ec44a148e · outbound

This paper cites Classifier-free diffusion guidance, in: NeurIPS 2021WorkshoponDeepGenerativeModelsandDownstreamAppli- cations.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Classifier-free diffusion guidance, in: NeurIPS 2021WorkshoponDeepGenerativeModelsandDownstreamAppli- cations

Reference 28

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

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Observation 2c095018-0a82-4e1d-aee4-68b049aa0743 · outbound

This paper cites Equivariant diffusion for molecule generation in 3d, in: International conference on machine learning, PMLR.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Equivariant diffusion for molecule generation in 3d, in: International conference on machine learning, PMLR

Reference 29

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No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

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Observation c6f261db-5ad6-4ed5-86a6-2e91f51ac872 · outbound

This paper cites an unresolved cited work.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Unresolved cited work

Reference 30

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Observation 38f36182-fae7-4b7c-9100-0c213b9a1a78 · outbound

This paper cites Learning joint 2-d and 3-d graph diffusion models for complete molecule generation.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Learning joint 2-d and 3-d graph diffusion models for complete molecule generation

Reference 31

Resolution
verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

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Observation 8e145c26-be9e-464e-bb24-496d29709258 · outbound

This paper cites an unresolved cited work.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Unresolved cited work

Reference 32

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Source-reported events for the cited work

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Observation 2a326ad2-d8de-44d5-8344-ee98be234e1e · outbound

This paper cites Mdm: Molecular diffusion model for 3d molecule generation, in: Proceedings of the AAAI Conference on Artificial Intelligence, pp.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Mdm: Molecular diffusion model for 3d molecule generation, in: Proceedings of the AAAI Conference on Artificial Intelligence, pp

Reference 33

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Source-reported events for the cited work

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Observation 8020606b-6e56-419e-8c22-6eb4e3acd818 · outbound

This paper cites Adualdiffusionmodelenables 3dmoleculegenerationandleadoptimizationbasedontargetpockets.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Adualdiffusionmodelenables 3dmoleculegenerationandleadoptimizationbasedontargetpockets

Reference 34

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verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.262718Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.563984Z digest=sha256:7376480b7ae27707d4663dd21e1650b5ea15d23e187a5aca3bfc3cd53d3f50c8

Observation 7ce86915-b3a3-4365-9901-5171299e29e6 · outbound

This paper cites Binding-adaptivediffusionmodelsfor structure-baseddrugdesign,in:ProceedingsoftheAAAIConference on Artificial Intelligence, pp.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Binding-adaptivediffusionmodelsfor structure-baseddrugdesign,in:ProceedingsoftheAAAIConference on Artificial Intelligence, pp

Reference 35

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.237314Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.571656Z digest=sha256:b9f10c9eb0a0cdfc2299d85362762958b4b9aa6b656cceb9eff7c797382740c4

Observation d7e58207-a974-437e-a5b8-7781f22078df · outbound

This paper cites Re-dock: Towards flexible and realistic molecular dock- ing with diffusion bridge, in: International Conference on Machine Learning, PMLR.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Re-dock: Towards flexible and realistic molecular dock- ing with diffusion bridge, in: International Conference on Machine Learning, PMLR

Reference 36

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.245455Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.569118Z digest=sha256:7a97319faf5554de6454901e7709461ccedeb4d4de71402531c89bad24d482bd

Observation 86e00927-f0e2-42a7-99b5-c0edf25c83bf · outbound

This paper cites Estimation of non-normalized statistical models by score matching.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Estimation of non-normalized statistical models by score matching

Reference 37

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.215987Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.576928Z digest=sha256:b6be150ffe90b342478dcf528a12329f015cf0c82c563c7781f1b010fef8dfeb

Observation 633517eb-f5c7-4b30-9930-cbbc809120f4 · outbound

This paper cites Protein-ligand inter- action prior for binding-aware 3d molecule diffusion models, in: The Twelfth International Conference on Learning Representations.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Protein-ligand inter- action prior for binding-aware 3d molecule diffusion models, in: The Twelfth International Conference on Learning Representations

Reference 38

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.229150Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.574218Z digest=sha256:0d13418e9e0038e778ae1a8ad2c7002bc0c65896e02c18ed0500e1c96f1a89a3

Observation 6fdcf802-6ed4-4f7d-8c15-e791fa1a1484 · outbound

This paper cites Junction tree variational autoencoder for molecular graph generation, in: International confer- ence on machine learning, PMLR.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Junction tree variational autoencoder for molecular graph generation, in: International confer- ence on machine learning, PMLR

Reference 39

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.200495Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.582220Z digest=sha256:89982e6be7903b62d3bfcd257b2bdbdd81c8445a5867a8ff16ce7903151710e4

Observation a32938a1-e985-414f-b12e-4f2ecd41a73c · outbound

This paper cites Equiv- ariant 3d-conditional diffusion model for molecular linker design.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Equiv- ariant 3d-conditional diffusion model for molecular linker design

Reference 40

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.208408Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.579481Z digest=sha256:89279211580c5b807efc7ecb9e17c431a17b399ed8fa4b00a37fe07ea82dfbca

Observation bb40f25a-1a0c-4a2b-b3d5-8caf03eada26 · outbound

This paper cites Auto-encoding variational{Bayes}, in: Int.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Auto-encoding variational{Bayes}, in: Int

Reference 41

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.184287Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.588056Z digest=sha256:5626aca86c033ae68ae2a7b1af2aaf09beec721b7cfc9016c32ada72b269ebb2

Observation 76aec5d5-b438-48a2-a9c0-179e65cce7b4 · outbound

This paper cites Torsional diffusion for molecular conformer generation.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Torsional diffusion for molecular conformer generation

Reference 42

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.192731Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.585495Z digest=sha256:ad77e384597d01afb25a0a51f01678b8e32a2cf4c80ea379afb09712597bfe68

Observation d21f4cec-4e56-4ed1-8489-56b9bb34a892 · outbound

This paper cites Diffusion-lm improves controllable text generation.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Diffusion-lm improves controllable text generation

Reference 43

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.168944Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.593394Z digest=sha256:9ea5407a5019d773af8a4acad3773a3c6d70e99fd78682f65aa546f2949f5b81

Observation 42332a86-445f-4433-8cab-3f04f3877130 · outbound

This paper cites an unresolved cited work.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Unresolved cited work

Reference 44

Resolution
unresolved
raw_fallback, observed 2026-08-06T23:01:12.176343Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.590892Z digest=sha256:e89a80e98f88683b12b5d37d6e74103b97f7f4c8d9ca990097a4e4780705446a

Observation a12b6b64-5bf2-4e57-9595-cb134d57a101 · outbound

This paper cites Functional-group-based diffusion for pocket-specific moleculegenerationandelaboration.AdvancesinNeuralInformation Processing Systems 36.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Functional-group-based diffusion for pocket-specific moleculegenerationandelaboration.AdvancesinNeuralInformation Processing Systems 36

Reference 45

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.160821Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.598994Z digest=sha256:ed2f73c3d76941d0eb11523ea068cb9d94f2671c706f299b8a51524bf995a885

Observation 210854da-2013-4327-bf18-9f2747964727 · outbound

This paper cites AUTODIFF: Autoregressive Diffusion Modeling for Structure-based Drug Design.

Unraveling the Potential of Diffusion Models in Small Molecule Generation AUTODIFF: Autoregressive Diffusion Modeling for Structure-based Drug Design

Reference 46

Resolution
verified exact
local_arxiv, observed 2026-08-06T23:01:11.754252Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.596073Z digest=sha256:05cd36c362c2b225a42b806e252786e93605879977eda9ad24b5bbb8715edf17

Observation 8e86eada-d882-4b1d-9e26-c8387e5a827e · outbound

This paper cites Generating 3d molecules for target protein binding, in: International Conference on Machine Learning (ICML).

Unraveling the Potential of Diffusion Models in Small Molecule Generation Generating 3d molecules for target protein binding, in: International Conference on Machine Learning (ICML)

Reference 47

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.144069Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.604875Z digest=sha256:3d75dda0581a2aa558d1abad0f8d856cd79505d229b33c245097eea79da0eb78

Observation cf057aa2-085f-4f9a-aa23-2915da48eb29 · outbound

This paper cites Flow matching for generative modeling, in: The Eleventh International Conference on Learning Representations.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Flow matching for generative modeling, in: The Eleventh International Conference on Learning Representations

Reference 48

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.152353Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.602192Z digest=sha256:eb374614a070c6242d919f70428dcae1d5d41f45a3f69ad46e99cfe05605d009

Observation 6ccdc613-f3ba-4ac3-b2a3-428c738192c7 · outbound

This paper cites Classifier-free graph diffusionformolecularpropertytargeting,in:JointEuropeanConfer- ence on Machine Learning and Knowledge Discovery in Databases, Springer.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Classifier-free graph diffusionformolecularpropertytargeting,in:JointEuropeanConfer- ence on Machine Learning and Knowledge Discovery in Databases, Springer

Reference 49

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.126258Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.611229Z digest=sha256:20e6f07beafbdf9a104e40749d0db8de99b80646699ba004af8f8f2094a2ed07

Observation 96d74deb-936a-49e7-b004-4d2a00a490ce · outbound

This paper cites Repaint: Inpainting using denoising diffusion probabilisticmodels,in:ProceedingsoftheIEEE/CVFconferenceon computer vision and pattern recognition, pp.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Repaint: Inpainting using denoising diffusion probabilisticmodels,in:ProceedingsoftheIEEE/CVFconferenceon computer vision and pattern recognition, pp

Reference 50

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.135032Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.607432Z digest=sha256:092a69d3148285b2c0c1ed28aab53ac9a2dabb6d21073020c2cc1b7c68fe90df

Observation 24fb7834-dafa-44ec-9f67-d2faed7325de · outbound

This paper cites Open babel: An open chemical toolbox.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Open babel: An open chemical toolbox

Reference 51

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.109173Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.617625Z digest=sha256:33019430f2284d5ba2b12e9aa77059632332585f502cadc1bed5197b1f25cdb9

Observation c143127c-2388-4238-b318-040bcfe3db6f · outbound

This paper cites 3d molecule generationbydenoisingvoxelgrids.

Unraveling the Potential of Diffusion Models in Small Molecule Generation 3d molecule generationbydenoisingvoxelgrids

Reference 52

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.117415Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.614112Z digest=sha256:505e1f1afe6fdd559c45348be9c4513dcab1ce02fa654a76f2c7af0d8edfac9f

Observation c2de0ee5-c024-4147-a9d6-6f3213549259 · outbound

This paper cites Scalablediffusionmodelswithtransform- ers, in: Proceedings of the IEEE/CVF International Conference on P.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Scalablediffusionmodelswithtransform- ers, in: Proceedings of the IEEE/CVF International Conference on P

Reference 53

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.094859Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.622901Z digest=sha256:eccb272d9979f5fb8a1b661f1f8c1a7faaf16f5948428b7c3b53ef3cabcdcc4c

Observation e1a39137-df64-4854-a33c-210348bb83dd · outbound

This paper cites Training language models to follow instructions with human feedback.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Training language models to follow instructions with human feedback

Reference 54

Resolution
unresolved
no resolver link, observed 2026-08-06T23:01:11.620238Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-06T23:01:11.620238Z digest=sha256:f69fdc7a8ee5f31a737c8770f905318e79c962f05692fc78ecf00817ef60c2e1

Observation 548a8c68-1430-4c4f-adda-e06b1a19a1a0 · outbound

This paper cites Hitting stride by degrees: Fine grained molecular generation via diffusion model.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Hitting stride by degrees: Fine grained molecular generation via diffusion model

Reference 55

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.077620Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.628949Z digest=sha256:91857def9a57bc26c0172165af6f9b4c7780f676b70e71dfe044e6c334531a7f

Observation a4289a24-1bd1-4543-8b65-f34e8f8d8b7d · outbound

This paper cites Moldiff: Addressing the atom-bond inconsistency problem in 3d molecule diffusion genera- tion, in: International Conference on Machine Learning, PMLR.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Moldiff: Addressing the atom-bond inconsistency problem in 3d molecule diffusion genera- tion, in: International Conference on Machine Learning, PMLR

Reference 56

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.085615Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.626318Z digest=sha256:59bb55a9937e55cd117ff1eb9a5a70815dc745e0ffc0350dffe3b1778d13836e

Observation 06f65c17-6e3b-40d6-bbb0-5c62764f019d · outbound

This paper cites an unresolved cited work.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Unresolved cited work

Reference 57

Resolution
unresolved
raw_fallback, observed 2026-08-06T23:01:12.060484Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.634263Z digest=sha256:7ad4b983f28e4f965ef269cf2ac5c017173f6616eddb3c92cce298f09cc5c566

Observation 303d4760-b477-4815-821d-f4bc45fedb89 · outbound

This paper cites Rcsb protein data bank.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Rcsb protein data bank

Reference 58

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.069362Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.631507Z digest=sha256:ec4c752b7b11e770b61ea38943d50b0dd84683c38917c5bba8d27bf2921492a9

Observation 2fb7d9f4-e022-45da-82f7-35d89f4bc1ad · outbound

This paper cites Quantum chemistry structures and properties of 134 kilo molecules.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Quantum chemistry structures and properties of 134 kilo molecules

Reference 59

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.042566Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.639886Z digest=sha256:28931d3a8c13cacae6088942e3391812f51a2964dfae977f26d4304b9bfdf170

Observation 571a2eb0-9c22-4c81-a429-6e1420415473 · outbound

This paper cites Coarse-to-fine: a hierarchical diffusion model for molecule generation in 3d, in: International Conference on Machine Learning, PMLR.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Coarse-to-fine: a hierarchical diffusion model for molecule generation in 3d, in: International Conference on Machine Learning, PMLR

Reference 60

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.051241Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.637306Z digest=sha256:d054bb8074b2e5f2079f211d84a9421deb409caa614707f8da023ccd3c161b07

Observation 08c46a22-2e62-44cc-9ade-4605b08796d6 · outbound

This paper cites A small-molecule tnikinhibitortargetsfibrosisinpreclinicalandclinicalmodels.Nature Biotechnology 43, 63–75.

Unraveling the Potential of Diffusion Models in Small Molecule Generation A small-molecule tnikinhibitortargetsfibrosisinpreclinicalandclinicalmodels.Nature Biotechnology 43, 63–75

Reference 61

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.026004Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.645110Z digest=sha256:6fb75e77519cab3b0c0d7c1b001c8f792bb23b8514f1e073d9239bb4cf428d3d

Observation 5085ddf1-4601-4e12-b331-0493538020c2 · outbound

This paper cites RDKit: Open-source cheminformatics.http://www.

Unraveling the Potential of Diffusion Models in Small Molecule Generation RDKit: Open-source cheminformatics.http://www

Reference 62

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.034352Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.642489Z digest=sha256:363fa16ace30b21390799ca67fa09da06cdb14fd5e9b5485b7193fd27ac3fee7

Observation a8851c0c-f14f-49c5-9d23-9b11499befbe · outbound

This paper cites an unresolved cited work.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Unresolved cited work

Reference 63

Resolution
unresolved
no resolver link, observed 2026-08-06T23:01:11.651168Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-06T23:01:11.651168Z digest=sha256:0d65d1c05d031e42434c1140e6fa82d7dbbcf444e4433a14c9e26880612a5180

Observation 8e0b7c28-734b-4f87-ac05-8d2b8e3ea378 · outbound

This paper cites High-resolution image synthesis with latent diffusion models, in: Proceedings of the IEEE/CVF conference on computer vision and pattern recognition, pp.

Unraveling the Potential of Diffusion Models in Small Molecule Generation High-resolution image synthesis with latent diffusion models, in: Proceedings of the IEEE/CVF conference on computer vision and pattern recognition, pp

Reference 64

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.017668Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.647800Z digest=sha256:a625982404bfae1342998ed366e5a12cbb9f753b3f70eb597784741aa7e075a3

Observation 7082fed7-db69-4062-8dd4-3b42ea768e83 · outbound

This paper cites E (n) equivari- ant graph neural networks, in: International conference on machine learning, PMLR.

Unraveling the Potential of Diffusion Models in Small Molecule Generation E (n) equivari- ant graph neural networks, in: International conference on machine learning, PMLR

Reference 65

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:11.995718Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.657101Z digest=sha256:dca0c8fa8dc48a6a07bc1450198c6ab47f1cc0367f8326b00c742257c6f53319

Observation 74aec772-39d8-43f1-92cc-f820b3fb32fb · outbound

This paper cites Silvr: Guided diffusion for molecule generation.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Silvr: Guided diffusion for molecule generation

Reference 66

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:12.004139Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.653897Z digest=sha256:3717e84725c8134734d18b75d694e49aacf1c5634380d85f6c6bd3b3e100e053

Observation ab37d709-cf2a-4933-bd54-bbc3377298ea · outbound

This paper cites Structure- baseddrugdesignwithequivariantdiffusionmodels.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Structure- baseddrugdesignwithequivariantdiffusionmodels

Reference 67

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:11.979248Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

source=pdf_text observed=2026-08-06T23:01:11.662298Z digest=sha256:33243545ed93b48c531f456cbdc98c92e23b03c34e22f5ad54501c6505f9e7d2

Observation 65e6246d-d205-435e-a957-9162d7140684 · outbound

This paper cites Fast high-resolution image synthesis with latent ad- versarialdiffusiondistillation,in:SIGGRAPHAsia2024Conference Papers, pp.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Fast high-resolution image synthesis with latent ad- versarialdiffusiondistillation,in:SIGGRAPHAsia2024Conference Papers, pp

Reference 68

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T23:01:11.987746Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

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Observation 8174d88b-bf66-4946-9a03-d25980bb1193 · outbound

This paper cites Consistency models, in: International Conference on Machine Learning, PMLR.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Consistency models, in: International Conference on Machine Learning, PMLR

Reference 69

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Observation c3bcfed0-52a4-4508-8793-164bcabdbb56 · outbound

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Unraveling the Potential of Diffusion Models in Small Molecule Generation Unresolved cited work

Reference 70

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Observation 9fad3b5a-cd00-4486-8644-f7373cff8732 · outbound

This paper cites Score-based generative modeling through stochas- tic differential equations.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Score-based generative modeling through stochas- tic differential equations

Reference 71

Resolution
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Observation 0dc9a009-27fa-4039-af97-3ce805313989 · outbound

This paper cites Generative modeling by estimating gradients of the data distribution.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Generative modeling by estimating gradients of the data distribution

Reference 72

Resolution
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Observation c70aed6a-3e19-4d29-8e55-6e53f947eeca · outbound

This paper cites Digress: Discrete denoising diffusion for graph generation, in: ICLR.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Digress: Discrete denoising diffusion for graph generation, in: ICLR

Reference 73

Resolution
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Observation 3352a39c-df8b-498d-9041-537f7ad724bf · outbound

This paper cites A deep learning approach to antibiotic discovery.

Unraveling the Potential of Diffusion Models in Small Molecule Generation A deep learning approach to antibiotic discovery

Reference 74

Resolution
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Observation 52ff2076-2cf4-40ea-8e55-3b1b712a3ec8 · outbound

This paper cites Boosting performance of generative diffusion model for molecular docking by training on artificial binding pockets.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Boosting performance of generative diffusion model for molecular docking by training on artificial binding pockets

Reference 75

Resolution
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Observation f7c40332-03fb-4367-a030-86936e0fd594 · outbound

This paper cites Midi: Mixed graph and 3d denoising diffusion for molecule generation, in: Joint European Conference on Machine Learning and Knowledge Discov- ery in Databases, Springer.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Midi: Mixed graph and 3d denoising diffusion for molecule generation, in: Joint European Conference on Machine Learning and Knowledge Discov- ery in Databases, Springer

Reference 76

Resolution
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Observation b6e30e98-047d-4f7e-a71c-6aef9984cd10 · outbound

This paper cites Swallowing the bitter pill: Simplified scalable conformer generation, in: ICML 2024 AI for Science Workshop.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Swallowing the bitter pill: Simplified scalable conformer generation, in: ICML 2024 AI for Science Workshop

Reference 77

Resolution
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This paper cites Gldm: hit molecule generation with constrained graph latent diffusion model.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Gldm: hit molecule generation with constrained graph latent diffusion model

Reference 78

Resolution
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Observation 5c228854-ae66-4e0e-a6c2-7244b26f1031 · outbound

This paper cites Guided diffusionformoleculargenerationwithinteractionprompt.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Guided diffusionformoleculargenerationwithinteractionprompt

Reference 79

Resolution
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Observation 4109d169-2166-453c-beb6-2109037dd46f · outbound

This paper cites Smiles, a chemical language and information system.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Smiles, a chemical language and information system

Reference 80

Resolution
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Source-reported events for the cited work

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Observation cc2e529d-52d3-4984-b7eb-e6900c7df484 · outbound

This paper cites Geometric- facilitated denoising diffusion model for 3d molecule generation, in: Proceedings of the AAAI Conference on Artificial Intelligence, pp.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Geometric- facilitated denoising diffusion model for 3d molecule generation, in: Proceedings of the AAAI Conference on Artificial Intelligence, pp

Reference 81

Resolution
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Observation 15feba49-542f-44c1-82f9-0ddc4f4a9dcb · outbound

This paper cites Diffdec: Structure-aware scaffold decoration with an end-to-end diffusion model.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Diffdec: Structure-aware scaffold decoration with an end-to-end diffusion model

Reference 82

Resolution
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Source-reported events for the cited work

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Observation 5fb75079-58d2-497d-a593-efc0b0b6565b · outbound

This paper cites Geodiff: A geometric diffusion model for molecular conformation generation, in: International Conference on Learning Representations.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Geodiff: A geometric diffusion model for molecular conformation generation, in: International Conference on Learning Representations

Reference 83

Resolution
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Source-reported events for the cited work

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Observation b8010cff-45a2-4483-b479-026ce4e3c9c9 · outbound

This paper cites Geometric latent diffusion models for 3d molecule generation, in: International Conference on Machine Learning, PMLR.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Geometric latent diffusion models for 3d molecule generation, in: International Conference on Machine Learning, PMLR

Reference 84

Resolution
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Observation c2282eb7-31f5-44f5-b1ae-dc6058db7dc0 · outbound

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Unraveling the Potential of Diffusion Models in Small Molecule Generation Unresolved cited work

Reference 85

Resolution
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Observation 9bbbd4d2-e950-4a61-b97d-9b9dffbfa734 · outbound

This paper cites Prompt-based 3d molecular diffusion models for structure-based drug design.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Prompt-based 3d molecular diffusion models for structure-based drug design

Reference 86

Resolution
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No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

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Observation ea4fdb69-4098-4594-a033-c0730adc8573 · outbound

This paper cites Graph neural networks: A review of methods and applications.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Graph neural networks: A review of methods and applications

Reference 87

Resolution
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Source-reported events for the cited work

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Observation c49852c6-ab95-43cb-9b82-2ff77a737cad · outbound

This paper cites WileyInter- disciplinary Reviews: Computational Molecular Science 14, e1711.

Unraveling the Potential of Diffusion Models in Small Molecule Generation WileyInter- disciplinary Reviews: Computational Molecular Science 14, e1711

Reference 88

Resolution
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Source-reported events for the cited work

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Observation 9606ad56-3ead-4499-aab6-2bdbbb96c94e · outbound

This paper cites Stride: Structure-guided generation for inverse design of molecules, in: NeurIPS 2023 AI for Science Workshop.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Stride: Structure-guided generation for inverse design of molecules, in: NeurIPS 2023 AI for Science Workshop

Reference 89

Resolution
verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

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Observation 36fb193b-e785-4393-b9a3-b29c47232cb0 · outbound

This paper cites Decompopt: Controllable and decomposed diffusion models for structure-basedmolecularoptimization,in:TheTwelfthInternational Conference on Learning Representations.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Decompopt: Controllable and decomposed diffusion models for structure-basedmolecularoptimization,in:TheTwelfthInternational Conference on Learning Representations

Reference 91

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

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Observation d0b9cc5d-4147-466e-aeb3-a17575404358 · outbound

This paper cites Molsnapper: Conditioning diffusion for structure based drug design.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Molsnapper: Conditioning diffusion for structure based drug design

Reference 92

Resolution
verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.

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Observation f0c4b7b0-f1cc-415e-8730-c41c9c094cc1 · outbound

This paper cites Nature , 1–3.

Unraveling the Potential of Diffusion Models in Small Molecule Generation Nature , 1–3

Reference 2024

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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Pith citing papers

No inbound Pith citation observations are available.