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Paper Citation Record · LEDGER

Sequence-based protein-protein interaction prediction and its applications in drug discovery

As of 18 August 2026, this Paper Citation Record lists 100 of 185 outbound references and 0 inbound Pith citation observations for arXiv:2507.19805.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2507.19805 v1

Coverage vector

measured 100 of 185 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-06T14:02:48.567466Z

measured 100 of 100 standing notices

One-hop event checks from named stored sources.

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measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

100 of 185 outbound references displayed

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External citation measurements

No source-named external measurement is stored.

Outbound references

Observation af6981ac-719e-4e2f-8cff-e87b524c9a11 · outbound

This paper cites Exploring Protein-Protein Interactions at the Proteome Level,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Exploring Protein-Protein Interactions at the Proteome Level,

Reference 1

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Observation 56c8aa77-0ca7-43f7-92e0-9a5ee516b354 · outbound

This paper cites Diversity of Protein–Protein Interactions,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Diversity of Protein–Protein Interactions,

Reference 2

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Observation 1c6af7c0-9378-40a9-8592-59e3870fd1ea · outbound

This paper cites Protein-Protein Interactions in DNA Mismatch Repair,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Protein-Protein Interactions in DNA Mismatch Repair,

Reference 3

Resolution
verified exact
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This paper cites Protein-Protein Interactions in Transcription: A Fertile Ground for Helix Mimetics,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Protein-Protein Interactions in Transcription: A Fertile Ground for Helix Mimetics,

Reference 4

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Observation 87e175a8-b088-4288-8291-0f98e4b8be03 · outbound

This paper cites Protein Translation: Biological Processes and Therapeutic Strategies for Human Diseases,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Protein Translation: Biological Processes and Therapeutic Strategies for Human Diseases,

Reference 5

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verified exact
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Observation aa198c56-8d84-4f3c-a765-281d16d27ab3 · outbound

This paper cites Identification of Protein Interactions Involved in Cellular Signaling,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Identification of Protein Interactions Involved in Cellular Signaling,

Reference 6

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Observation 6f5702f4-0af7-43c6-82ec-2f94912c0131 · outbound

This paper cites Molecular Chaperones and Protein Quality Control: An Introduction to the JBC Reviews Thematic Series,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Molecular Chaperones and Protein Quality Control: An Introduction to the JBC Reviews Thematic Series,

Reference 7

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Observation c6f63070-ad5a-496c-8ea6-817327cf90f4 · outbound

This paper cites Chapter 4: Protein Interactions and Disease,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Chapter 4: Protein Interactions and Disease,

Reference 8

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verified exact
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Source-reported events for the cited work

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Observation 2db556a1-9653-47c9-af94-eba6c1f1a281 · outbound

This paper cites Comprehensive Characterization of Protein–Protein Interactions Perturbed by Dis- ease Mutations,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Comprehensive Characterization of Protein–Protein Interactions Perturbed by Dis- ease Mutations,

Reference 9

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Observation d59b78ba-c9c0-4062-bdfd-0639117eac4a · outbound

This paper cites Discovery and Significance of Protein-Protein Interactions in Health and Disease,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Discovery and Significance of Protein-Protein Interactions in Health and Disease,

Reference 10

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Observation 34e54a35-3fc0-4aea-8b6b-6ce47b7bf75a · outbound

This paper cites Alzheimer Disease,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Alzheimer Disease,

Reference 11

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Observation edb905b8-c7bd-4c20-afd6-d125a664e7b7 · outbound

This paper cites Pathological Mechanisms Underlying TDP-43 Driven Neurode- generation in FTLD–ALS Spectrum Disorders,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Pathological Mechanisms Underlying TDP-43 Driven Neurode- generation in FTLD–ALS Spectrum Disorders,

Reference 12

Resolution
verified exact
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Observation 1480bf45-1bfc-486b-b2a2-e051a4a58cb8 · outbound

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Sequence-based protein-protein interaction prediction and its applications in drug discovery Parkinson's Disease,

Reference 13

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Observation 34d9cb50-33f3-4302-bfc4-015e4548f07b · outbound

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Sequence-based protein-protein interaction prediction and its applications in drug discovery Huntington Disease,

Reference 14

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Observation 38555ff4-f0a4-4221-8fc4-1ed41c16d518 · outbound

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Sequence-based protein-protein interaction prediction and its applications in drug discovery Creutzfeldt-Jakob Disease,

Reference 15

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Observation 5819b5bf-ab28-4c03-a62d-b40ff2e0b49a · outbound

This paper cites KRAS Mutation: From Undruggable to Druggable in Cancer,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery KRAS Mutation: From Undruggable to Druggable in Cancer,

Reference 16

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Observation 5146d9f1-941e-4a8e-9067-7d4fa155ac38 · outbound

This paper cites Illuminating the Dark Protein-Protein Interactome,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Illuminating the Dark Protein-Protein Interactome,

Reference 17

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This paper cites A Protein Interaction Landscape of Breast Cancer,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery A Protein Interaction Landscape of Breast Cancer,

Reference 18

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Observation ba583684-2e8a-447e-bf06-e262c82946de · outbound

This paper cites Decoding the Functional Impact of the Cancer Genome through Protein–Protein Interactions,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Decoding the Functional Impact of the Cancer Genome through Protein–Protein Interactions,

Reference 19

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verified exact
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Observation 7059e718-f7c4-4e6c-aefc-3ec8262f20f8 · outbound

This paper cites Affinity-purification Coupled to Mass Spectrometry: Basic Principles and Strategies,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Affinity-purification Coupled to Mass Spectrometry: Basic Principles and Strategies,

Reference 20

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Observation 6d0ef549-4ff9-47c6-b263-33c2a6540a56 · outbound

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Sequence-based protein-protein interaction prediction and its applications in drug discovery Exploring Protein–Protein Interactions with Phage Display,

Reference 21

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Observation 1d7c2f13-711e-4653-b383-7d8440e6feb7 · outbound

This paper cites Current Experimental Methods for Characterizing Protein–Protein Interactions,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Current Experimental Methods for Characterizing Protein–Protein Interactions,

Reference 22

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Observation a27a0fb9-e5ad-45bc-b178-8f3cfe005b99 · outbound

This paper cites Yeast Two-Hybrid, a Powerful Tool for Systems Biology,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Yeast Two-Hybrid, a Powerful Tool for Systems Biology,

Reference 23

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Source-reported events for the cited work

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Observation 832c0d83-26be-47c6-bac0-90d04c5199ea · outbound

This paper cites Studying Protein–Protein Interactions: Latest and Most Popular Approaches,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Studying Protein–Protein Interactions: Latest and Most Popular Approaches,

Reference 24

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Observation 4ead835e-60ca-4e89-9233-318023b29b8c · outbound

This paper cites Global Investigation of Protein–Protein Interactions in Yeast Saccharomyces Cerevisiae Using Re-Occurring Short Polypeptide Sequences,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Global Investigation of Protein–Protein Interactions in Yeast Saccharomyces Cerevisiae Using Re-Occurring Short Polypeptide Sequences,

Reference 25

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Observation 4b31e7bb-2061-48af-92a1-2b872ee2b6c5 · outbound

This paper cites SPRINT: Ultrafast Protein-Protein Interaction Prediction of the Entire Human Interactome,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery SPRINT: Ultrafast Protein-Protein Interaction Prediction of the Entire Human Interactome,

Reference 26

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Observation 7e848476-0ec9-436c-bab6-f7178de49496 · outbound

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Sequence-based protein-protein interaction prediction and its applications in drug discovery PIPE4: Fast PPI Predictor for Comprehensive Inter- and Cross-Species Interactomes,

Reference 27

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verified exact
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Source-reported events for the cited work

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Observation 16a73497-0e13-494d-b426-3aecc5f76c6e · outbound

This paper cites Cracking the Black Box of Deep Sequence-Based Protein– Protein Interaction Prediction,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Cracking the Black Box of Deep Sequence-Based Protein– Protein Interaction Prediction,

Reference 28

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Observation 05af5c16-ed4a-48d0-b647-acdf5dee8381 · outbound

This paper cites Stabilization of Protein-Protein Interactions in Drug Discovery,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Stabilization of Protein-Protein Interactions in Drug Discovery,

Reference 29

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Observation 08700f81-bb23-45a2-b19e-5ee40f3948d1 · outbound

This paper cites Evolution of In Silico Strategies for Protein-Protein Interaction Drug Discovery,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Evolution of In Silico Strategies for Protein-Protein Interaction Drug Discovery,

Reference 30

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Source-reported events for the cited work

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Observation e14c76b5-fe4b-423c-a515-2383393cb694 · outbound

This paper cites Rational Design of Peptide-Based Inhibitors Disrupting Protein- Protein Interactions,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Rational Design of Peptide-Based Inhibitors Disrupting Protein- Protein Interactions,

Reference 31

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Observation 76eddc06-5215-4dba-9b6e-f59063782b09 · outbound

This paper cites The RCSB Protein Data Bank: Integrative View of Protein, Gene and 3D Structural Information,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery The RCSB Protein Data Bank: Integrative View of Protein, Gene and 3D Structural Information,

Reference 32

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Observation 14d30f3d-9ce6-4900-b4e5-6a9e01e45146 · outbound

This paper cites The BioGRID Database: A Comprehensive Biomedical Resource of Curated Protein, Genetic, and Chemical Interactions,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery The BioGRID Database: A Comprehensive Biomedical Resource of Curated Protein, Genetic, and Chemical Interactions,

Reference 33

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verified exact
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Source-reported events for the cited work

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Observation 730b3b1f-91b7-4747-ac2b-a56656c242ce · outbound

This paper cites Highly Accurate Protein Structure Prediction with AlphaFold,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Highly Accurate Protein Structure Prediction with AlphaFold,

Reference 34

Resolution
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Observation 4f0d204f-7c2a-4434-b241-033173be80a8 · outbound

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Sequence-based protein-protein interaction prediction and its applications in drug discovery Accurate Structure Prediction of Biomolecular Interactions with AlphaFold 3,

Reference 35

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Observation 599f65ce-4e7a-4a9a-bdc9-9c4010d2241b · outbound

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Sequence-based protein-protein interaction prediction and its applications in drug discovery Evolutionary-Scale Prediction of Atomic-Level Protein Structure with a Language Model,

Reference 36

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Observation 31d0d208-f918-4fa2-804e-d80b987ef9b4 · outbound

This paper cites Chai-1: Decoding the Molecular Interactions of Life.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Chai-1: Decoding the Molecular Interactions of Life

Reference 37

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Observation fab69582-16dc-478a-9ab0-5af2d5029e9d · outbound

This paper cites Boltz-1 Democratizing Biomolecular Interaction Modeling.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Boltz-1 Democratizing Biomolecular Interaction Modeling

Reference 38

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no resolver link, observed 2026-08-06T14:02:48.270055Z

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Observation c2bbfe4a-e339-49dc-a0d4-7cf359b3da8c · outbound

This paper cites Boltz-2: Towards Accurate and Efficient Binding Affinity Prediction.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Boltz-2: Towards Accurate and Efficient Binding Affinity Prediction

Reference 39

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Observation e16429dd-c2d0-4532-a47d-1e34a2721820 · outbound

This paper cites AlphaFold Predictions Are Valuable Hypotheses and Accelerate but Do Not Replace Experimental Structure Determination,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery AlphaFold Predictions Are Valuable Hypotheses and Accelerate but Do Not Replace Experimental Structure Determination,

Reference 40

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Observation a28c9f2a-78f1-4f5f-823a-b360a70d1cc0 · outbound

This paper cites Multi-Level Analysis of Intrinsically Disordered Protein Docking Methods,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Multi-Level Analysis of Intrinsically Disordered Protein Docking Methods,

Reference 41

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation 0815b8cb-b4d4-4b27-b788-bf423c81faa9 · outbound

This paper cites Prediction of Protein–Protein Interactions Using Sequences of Intrinsically Disordered Regions,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Prediction of Protein–Protein Interactions Using Sequences of Intrinsically Disordered Regions,

Reference 42

Resolution
verified exact
doi, observed 2026-08-06T14:03:26.206082Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation db7aeabf-d739-40f0-abf0-1d70ac33af00 · outbound

This paper cites Systematic Discovery of Protein Interaction Interfaces Using AlphaFold and Exper- imental Validation,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Systematic Discovery of Protein Interaction Interfaces Using AlphaFold and Exper- imental Validation,

Reference 43

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Observation e393f38f-fa4c-445a-b2c6-d76fbb10e66d · outbound

This paper cites Binding Mechanisms of Intrinsically Disordered Proteins: Insights from Experimental Studies and Structural Predictions,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Binding Mechanisms of Intrinsically Disordered Proteins: Insights from Experimental Studies and Structural Predictions,

Reference 44

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no resolver link, observed 2026-08-06T14:02:48.298610Z

Source-reported events for the cited work

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source=pdf_text observed=2026-08-06T14:02:48.298610Z digest=sha256:831bb047e47160cc097c41b274c47c35d53daeacea4671e8dd713a10c1806417

Observation 50d050b9-6393-4b68-97b2-07791ded399d · outbound

This paper cites Deep Learning Tools Predict Variants in Disordered Regions with Lower Sensitivity,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Deep Learning Tools Predict Variants in Disordered Regions with Lower Sensitivity,

Reference 45

Resolution
verified exact
doi, observed 2026-08-06T14:03:25.837311Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.302621Z digest=sha256:0581980d77e024f41d4cde94876f58daf14eaf5c7d27b5e4a52912440e026dff

Observation ebd663e6-359b-45e4-9732-ca566dbe6952 · outbound

This paper cites Recent Progress and Future Challenges in Structure-Based Protein-Protein Interaction Prediction,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Recent Progress and Future Challenges in Structure-Based Protein-Protein Interaction Prediction,

Reference 46

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no resolver link, observed 2026-08-06T14:02:48.306687Z

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Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-06T14:02:48.306687Z digest=sha256:d8f6961fc7db53618786f1059de4a22aa9b8cccfac60e207c909033debef1a75

Observation cbe9447d-da0e-400b-95ac-001db9d28d32 · outbound

This paper cites Raisinghani, V.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Raisinghani, V

Reference 47

Resolution
verified exact
doi, observed 2026-08-06T14:03:25.585337Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.311239Z digest=sha256:42e5f3d6fa20f0298626c06cd2d5d753c863507abbdc474347bb8474a84ec1f4

Observation 7a01ee86-f172-4df4-9d23-d2ff9e87305d · outbound

This paper cites Mitchell, Machine Learning.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Mitchell, Machine Learning

Reference 48

Resolution
unresolved
no resolver link, observed 2026-08-06T14:02:48.315422Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-06T14:02:48.315422Z digest=sha256:6c7aff055bbe1dc5d9045da1175eb143497f9b3dc0a0e4e4054f55e1d73f4dda

Observation e0121713-4e17-4f62-b4eb-edd0fe3cc7b7 · outbound

This paper cites Protein–Protein Binding Affinity Prediction from Amino Acid Sequence,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Protein–Protein Binding Affinity Prediction from Amino Acid Sequence,

Reference 49

Resolution
verified exact
doi, observed 2026-08-06T14:03:25.443662Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.319515Z digest=sha256:ec03d3567516eaa7297a307fa76a669e5fd6c2ad1a0a1f05e12be1367bde2480

Observation 46de0ba7-795c-4a97-8336-1d1ba3372f25 · outbound

This paper cites ISLAND: In-Silico Proteins Binding Affinity Prediction Using Sequence Information,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery ISLAND: In-Silico Proteins Binding Affinity Prediction Using Sequence Information,

Reference 50

Resolution
verified exact
doi, observed 2026-08-06T14:03:25.239974Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.323709Z digest=sha256:2ba4639c58c54e5a529157f59cfd982739a74d688f7c141ef5870c4e7c2239f2

Observation fb8e4fae-99c9-49e6-a3ba-b3148dd06b6b · outbound

This paper cites Machine Learning Methods for Protein-Protein Binding Affinity Prediction in Protein Design,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Machine Learning Methods for Protein-Protein Binding Affinity Prediction in Protein Design,

Reference 51

Resolution
unresolved
no resolver link, observed 2026-08-06T14:02:48.327938Z

Source-reported events for the cited work

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source=pdf_text observed=2026-08-06T14:02:48.327938Z digest=sha256:56940e09641b2d007edfdff66fb764e27efc4f9016db55b8483aa43375fe6c42

Observation 80a2b479-417d-4f1f-a682-53d9c8df5c97 · outbound

This paper cites PPI-Affinity: A Web Tool for the Prediction and Optimization of Protein– Peptide and Protein–Protein Binding Affinity,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery PPI-Affinity: A Web Tool for the Prediction and Optimization of Protein– Peptide and Protein–Protein Binding Affinity,

Reference 52

Resolution
verified exact
doi, observed 2026-08-06T14:03:25.067541Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.331757Z digest=sha256:0709f723980b6afd8b26acd6eee2269248a4db7c249ca7cf63ab19089aadff51

Observation 8d1e32d9-f47f-498f-9940-5db4206fdd15 · outbound

This paper cites Predicted Protein–Protein Interaction Sites from Local Sequence Information,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Predicted Protein–Protein Interaction Sites from Local Sequence Information,

Reference 53

Resolution
verified exact
doi, observed 2026-08-06T14:03:24.880809Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.335683Z digest=sha256:1b125b478dd3a76a3c0d8046a8445c0817da77783bd801dbdccfb0770f914fa7

Observation 9749c4e1-a5f4-49e2-b8c9-d7992757433d · outbound

This paper cites Progress and Challenges in Predicting Protein–Protein Interaction Sites,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Progress and Challenges in Predicting Protein–Protein Interaction Sites,

Reference 54

Resolution
verified exact
doi, observed 2026-08-06T14:03:24.689047Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.339528Z digest=sha256:fe299b8481456e7f4d0ed316d7b1ce64d92498799a8d1cbbad0ba4ab4757825d

Observation bdea9777-218e-49a8-bb24-bbc2cfb71924 · outbound

This paper cites Review and Comparative Assessment of Sequence-Based Predictors of Protein-Binding Residues,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Review and Comparative Assessment of Sequence-Based Predictors of Protein-Binding Residues,

Reference 55

Resolution
verified exact
doi, observed 2026-08-06T14:03:24.468929Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation b5d004c7-623b-4565-8818-ed6d5e47cf1c · outbound

This paper cites DELPHI: Accurate Deep Ensemble Model for Protein Interaction Sites Prediction,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery DELPHI: Accurate Deep Ensemble Model for Protein Interaction Sites Prediction,

Reference 56

Resolution
verified exact
doi, observed 2026-08-06T14:03:24.257763Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.347341Z digest=sha256:f0ab61ed3ce6b51c1218847b2582a5535e50cb2e2e731b89df588cdd5a31cf6f

Observation f474b88f-53e6-4345-895b-1e8965a1f9ea · outbound

This paper cites Using Support Vector Machine Combined with Auto Covariance to Predict Protein–Protein Interactions from Protein Sequences,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Using Support Vector Machine Combined with Auto Covariance to Predict Protein–Protein Interactions from Protein Sequences,

Reference 57

Resolution
verified exact
doi, observed 2026-08-06T14:03:24.102005Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.351739Z digest=sha256:0795a3c50195d509e6d2bc0e45845d12c4ffc80668a3d9e90fc7bff2b560cc9d

Observation 9d971338-c457-49f9-87d7-85507e351b64 · outbound

This paper cites Choosing Negative Examples for the Prediction of Protein-Protein Interactions,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Choosing Negative Examples for the Prediction of Protein-Protein Interactions,

Reference 58

Resolution
verified exact
doi, observed 2026-08-06T14:03:23.889416Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.355843Z digest=sha256:9e4e8b15279c90fdee5df2dcba44145712c03ac8505ef16ded6375a4ac3eba0d

Observation 95803dec-6db6-4e02-b7da-e31b908d9377 · outbound

This paper cites Romero-Molina, Y.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Romero-Molina, Y

Reference 59

Resolution
malformed identifier
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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-06T14:02:48.359703Z digest=sha256:7f3397160c5e2759f2909eeeda86ef28dfa55b5abc640bfde16c7920dfd84ec3

Observation 0a1e9c53-364e-44f9-90de-cfd3b956204f · outbound

This paper cites The Negatome Database: A Reference Set of Non-Interacting Protein Pairs,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery The Negatome Database: A Reference Set of Non-Interacting Protein Pairs,

Reference 60

Resolution
verified exact
doi, observed 2026-08-06T14:03:23.760977Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.363661Z digest=sha256:e044cf3a147b4da3d64df1e1349651e0670f8a8bcd156a2fec319535f35d34f5

Observation ae3de114-e64e-453f-ae2c-99b1f78ed989 · outbound

This paper cites Negatome 2.0: A Database of Non-Interacting Proteins Derived by Literature Mining, Manual Annotation and Protein Structure Analysis,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Negatome 2.0: A Database of Non-Interacting Proteins Derived by Literature Mining, Manual Annotation and Protein Structure Analysis,

Reference 61

Resolution
verified exact
doi, observed 2026-08-06T14:03:23.550512Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.367553Z digest=sha256:97bed57e36693fedeb39d087be0fae7def76016fe840173a27337e7108765227

Observation df3e49a5-b435-40db-b760-cc101b8c1c01 · outbound

This paper cites UniProt: The Universal Protein Knowledgebase in 2025,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery UniProt: The Universal Protein Knowledgebase in 2025,

Reference 62

Resolution
unresolved
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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-06T14:02:48.371401Z digest=sha256:02df8e0131cb1b72a669dd30a7d2e55dcd0504a4b0d3ea5102d5bfe9ff2e584a

Observation fcb39777-ba0d-438f-8e42-45d4fdf61888 · outbound

This paper cites The STRING Database in 2023: Protein-Protein Association Networks and Functional Enrichment Analyses for Any Sequenced Genome of Interest,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery The STRING Database in 2023: Protein-Protein Association Networks and Functional Enrichment Analyses for Any Sequenced Genome of Interest,

Reference 63

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unresolved
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Source-reported events for the cited work

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source=pdf_text observed=2026-08-06T14:02:48.375410Z digest=sha256:3ef2d51ddafda708025f3300e891e389f8d274557340e7d42e85d2f96182ac7d

Observation 555428e4-c6a0-4ef7-adcf-743ddcb3547b · outbound

This paper cites The IntAct Database: Efficient Access to Fine-Grained Molecular Interaction Data,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery The IntAct Database: Efficient Access to Fine-Grained Molecular Interaction Data,

Reference 64

Resolution
verified exact
doi, observed 2026-08-06T14:03:23.299385Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.379392Z digest=sha256:d9184e400913672bc1f9427bd53deceb81c6cc5163bb5f3f0a1d4cc29ed525c3

Observation 4125b9bc-42a5-491b-9517-ba4064810c53 · outbound

This paper cites MINT, the Molecular Interaction Database: 2012 Update,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery MINT, the Molecular Interaction Database: 2012 Update,

Reference 65

Resolution
verified exact
doi, observed 2026-08-06T14:03:23.067913Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.383669Z digest=sha256:68c646349f27e925e1071c8cacd67878285145ddb08f92b1dd65b61d57ecb883

Observation ae51ce67-4a3e-4ccf-995b-64b07cff51ad · outbound

This paper cites Propedia v2.3: A Novel Representation Approach for the Peptide-Protein Interaction Database Using Graph-Based Structural Signatures,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Propedia v2.3: A Novel Representation Approach for the Peptide-Protein Interaction Database Using Graph-Based Structural Signatures,

Reference 66

Resolution
unresolved
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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-06T14:02:48.387614Z digest=sha256:e792f35383688702e8b141350210faf412ad59e71655c705c702f6ec711c8dc4

Observation 988ee7d7-b051-4fc9-91b3-09663d49ba18 · outbound

This paper cites Protein Sequence Redundancy Reduction: Comparison of Various Method,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Protein Sequence Redundancy Reduction: Comparison of Various Method,

Reference 67

Resolution
verified exact
doi, observed 2026-08-06T14:03:22.908440Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.391733Z digest=sha256:b0810960a14c1a697c8469a760d1cfeb5d5e1cdf217e127af096bf42ec8864fe

Observation 8eff839c-d222-44ea-a479-a76fff80ee1e · outbound

This paper cites Multifaceted Protein–Protein Interaction Prediction Based on Siamese Residual RCNN,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Multifaceted Protein–Protein Interaction Prediction Based on Siamese Residual RCNN,

Reference 69

Resolution
verified exact
doi, observed 2026-08-06T14:02:50.148541Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.400302Z digest=sha256:88ac4ebfb93f4be612f139ce00d328442e55d240a1d96352d6f33d27ffa230f9

Observation 43fd2e60-bffc-4fed-bc8a-5115fd707c61 · outbound

This paper cites D-SCRIPT Translates Genome to Phenome with Sequence-Based, Structure-Aware, Genome-Scale Predictions of Protein-Protein Interactions,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery D-SCRIPT Translates Genome to Phenome with Sequence-Based, Structure-Aware, Genome-Scale Predictions of Protein-Protein Interactions,

Reference 70

Resolution
verified exact
doi, observed 2026-08-06T14:02:50.135509Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.404554Z digest=sha256:d45426efdbe5d8adbd03cc64d39a60ee56f2e016ddbd4fc6f46986f11dffd302

Observation 382ff9b6-f153-4bc0-bc23-d26e18fa6ff8 · outbound

This paper cites Gradient,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Gradient,

Reference 71

Resolution
verified exact
doi, observed 2026-08-06T14:02:50.121355Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

source=pdf_text observed=2026-08-06T14:02:48.413982Z digest=sha256:29f2a963eff4d262311f62a3db36a69a65dc90f9e7ad713cff3b579e6f33d481

Observation d085bc69-518d-4292-a1e9-5b2b92d958d5 · outbound

This paper cites MMseqs2 Enables Sensitive Protein Sequence Searching for the Analysis of Massive Data Sets,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery MMseqs2 Enables Sensitive Protein Sequence Searching for the Analysis of Massive Data Sets,

Reference 72

Resolution
malformed identifier
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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-06T14:02:48.419105Z digest=sha256:1d027ec7a15fa0af9a39b35cfbef1372b2c8ddc922fc0939ea2db130c8814989

Observation 71026c9b-7819-4e8c-9903-1c88eaeb66f3 · outbound

This paper cites Improving Protein-Protein Interactions Prediction Accuracy Using XGBoost Feature Selection and Stacked Ensemble Classifier,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Improving Protein-Protein Interactions Prediction Accuracy Using XGBoost Feature Selection and Stacked Ensemble Classifier,

Reference 73

Resolution
unresolved
no resolver link, observed 2026-08-06T14:02:48.428277Z

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Unavailable: canonical work link unavailable.

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Observation ada5f5e0-6184-4592-ae4a-297d7d9da0fd · outbound

This paper cites PLM-interact: Extending Protein Language Models to Predict Protein-Protein Interac- tions.

Sequence-based protein-protein interaction prediction and its applications in drug discovery PLM-interact: Extending Protein Language Models to Predict Protein-Protein Interac- tions

Reference 74

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Observation 77cb48a2-8d42-4576-8fe7-2475f47b5af0 · outbound

This paper cites PRING: Rethinking Protein-Protein Interaction Prediction from Pairs to Graphs,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery PRING: Rethinking Protein-Protein Interaction Prediction from Pairs to Graphs,

Reference 75

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verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation d165094e-0aa6-407a-84ac-8ea92bd5b4c0 · outbound

This paper cites Flaws in Evaluation Schemes for Pair-Input Computational Predictions,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Flaws in Evaluation Schemes for Pair-Input Computational Predictions,

Reference 76

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation 96cbbd64-25ff-42b9-ba62-a18d1b3477e6 · outbound

This paper cites Benchmark Evaluation of Protein–Protein Interaction Predic- tion Algorithms,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Benchmark Evaluation of Protein–Protein Interaction Predic- tion Algorithms,

Reference 77

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation 15ae2362-d942-45f6-ad55-b67c89670c7a · outbound

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Sequence-based protein-protein interaction prediction and its applications in drug discovery Unresolved cited work

Reference 78

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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Observation 71c444a0-3038-4a6b-87be-8ebeda84b4b0 · outbound

This paper cites an unresolved cited work.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Unresolved cited work

Reference 79

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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Observation f71cd94d-b5e7-48c0-9e35-cc9aa94adb68 · outbound

This paper cites Goodfellow, Y.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Goodfellow, Y

Reference 80

Resolution
unresolved
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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Observation 7b06b3ff-af99-46c5-8beb-3c0601bef011 · outbound

This paper cites Multi-Schema Computational Prediction of the Comprehensive SARS-CoV-2 vs. Human Interactome,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Multi-Schema Computational Prediction of the Comprehensive SARS-CoV-2 vs. Human Interactome,

Reference 81

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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Observation 7be00f42-91fe-4ffb-9fc9-69c13cf708f7 · outbound

This paper cites Prediction of Human-Virus Protein-Protein Interactions through a Sequence Embedding-Based Machine Learning Method,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Prediction of Human-Virus Protein-Protein Interactions through a Sequence Embedding-Based Machine Learning Method,

Reference 82

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verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation fd826dfe-d947-4217-b47d-cb8a0f2bb4de · outbound

This paper cites LSTM-PHV: Prediction of Human-Virus Protein– Protein Interactions by LSTM with Word2vec,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery LSTM-PHV: Prediction of Human-Virus Protein– Protein Interactions by LSTM with Word2vec,

Reference 83

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation 92953f84-ed80-4779-970e-abf9905e6d62 · outbound

This paper cites Transfer Learning via Multi-Scale Convolutional Neural Layers for Human–Virus Protein–Protein Interaction Prediction,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Transfer Learning via Multi-Scale Convolutional Neural Layers for Human–Virus Protein–Protein Interaction Prediction,

Reference 84

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation 8bd2ecf1-ac96-4bf6-adad-d70da6f29a12 · outbound

This paper cites A Multitask Transfer Learning Framework for the Prediction of Virus-Human Protein–Protein Interactions,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery A Multitask Transfer Learning Framework for the Prediction of Virus-Human Protein–Protein Interactions,

Reference 85

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation 8ecf388e-f36c-4d1a-ab84-d4d07deca56c · outbound

This paper cites Large-Scale Data Mining Pipeline for Identifying Novel Soybean Genes Involved in Resistance against the Soybean Cyst Nematode,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Large-Scale Data Mining Pipeline for Identifying Novel Soybean Genes Involved in Resistance against the Soybean Cyst Nematode,

Reference 86

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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Observation 73da9179-c85e-41ea-a72f-a6539b966844 · outbound

This paper cites Predicting Novel Protein-Protein Interactions between the HIV-1 Virus and Homo Sapiens,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Predicting Novel Protein-Protein Interactions between the HIV-1 Virus and Homo Sapiens,

Reference 87

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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Observation 15c83c97-8196-43ed-bf2c-eb517c9f849c · outbound

This paper cites Topsy-Turvy: Integrating a Global View into Sequence-Based PPI Prediction,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Topsy-Turvy: Integrating a Global View into Sequence-Based PPI Prediction,

Reference 88

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation b160f344-2f84-44d9-aedc-72acc06ec5a7 · outbound

This paper cites INTREPPPID—an Orthologue-Informed Quintuplet Network for Cross- Species Prediction of Protein–Protein Interaction,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery INTREPPPID—an Orthologue-Informed Quintuplet Network for Cross- Species Prediction of Protein–Protein Interaction,

Reference 89

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation 86bdc226-5cee-43dc-a6de-b1d46d1316a8 · outbound

This paper cites SENSE-PPI Reconstructs Interactomes within, across, and between Species at the Genome Scale,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery SENSE-PPI Reconstructs Interactomes within, across, and between Species at the Genome Scale,

Reference 90

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Unavailable: canonical work link unavailable.

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Observation 0a54a003-b517-423c-9e30-2a7400570b46 · outbound

This paper cites Species-Specific microRNA Discovery and Target Prediction in the Soybean Cyst Nematode,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Species-Specific microRNA Discovery and Target Prediction in the Soybean Cyst Nematode,

Reference 91

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation 1e1551eb-08f3-4198-be64-fd3163335907 · outbound

This paper cites Proteome-Wide Prediction of Lysine Methylation Leads to Identification of H2BK43 Methylation and Outlines the Potential Methyllysine Proteome,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Proteome-Wide Prediction of Lysine Methylation Leads to Identification of H2BK43 Methylation and Outlines the Potential Methyllysine Proteome,

Reference 92

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Unavailable: canonical work link unavailable.

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Observation 39939e52-836b-4700-8fc9-b02f72ee6d04 · outbound

This paper cites Machine Learning Prediction of Antimicrobial Peptides,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Machine Learning Prediction of Antimicrobial Peptides,

Reference 93

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation bf5bcd3d-2e89-4d65-aef4-39ea4cd53694 · outbound

This paper cites The Impact of Data Difficulty Factors on Classification of Imbalanced and Concept Drifting Data Streams,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery The Impact of Data Difficulty Factors on Classification of Imbalanced and Concept Drifting Data Streams,

Reference 94

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation 8bb32d15-f13a-4e31-aa3e-6cba1dfc0413 · outbound

This paper cites The Receiver Operating Characteristic Curve Accurately Assesses Imbalanced Datasets,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery The Receiver Operating Characteristic Curve Accurately Assesses Imbalanced Datasets,

Reference 95

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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Observation aedba15a-706a-45be-9bd4-1e80c9d6a7a7 · outbound

This paper cites Addressing Data Imbalance in Machine Learning: Challenges and Approaches,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Addressing Data Imbalance in Machine Learning: Challenges and Approaches,

Reference 96

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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Observation 6196ba6e-e77c-42f6-81dc-033aa6a8339c · outbound

This paper cites Reciprocal Perspective for Improved Protein-Protein Interaction Prediction,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Reciprocal Perspective for Improved Protein-Protein Interaction Prediction,

Reference 97

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation d8fdd48c-1635-4890-9b24-2085bd177cc1 · outbound

This paper cites An Empirical Framework for Binary Interactome Mapping,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery An Empirical Framework for Binary Interactome Mapping,

Reference 98

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation 51e3166b-60a7-449d-bd21-6f4e0ccf18ec · outbound

This paper cites Estimating the Size of the Human Interactome,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Estimating the Size of the Human Interactome,

Reference 99

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation 7644e981-c8bc-4ff3-980b-ef8d8b7c2a85 · outbound

This paper cites Prediction of Protein Cellular Attributes Using Pseudo-Amino Acid Composition,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Prediction of Protein Cellular Attributes Using Pseudo-Amino Acid Composition,

Reference 100

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

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Observation 57df5d3e-8cba-4df3-83fc-461adba730e4 · outbound

This paper cites Predicting Protein–Protein Interactions Based Only on Sequences Information,.

Sequence-based protein-protein interaction prediction and its applications in drug discovery Predicting Protein–Protein Interactions Based Only on Sequences Information,

Reference 101

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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Pith citing papers

No inbound Pith citation observations are available.