Paper Citation Record · LEDGER

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning

As of 23 August 2026, this Paper Citation Record lists 19 of 19 outbound references and 0 inbound Pith citation observations for arXiv:2604.10531.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2604.10531 v1

Coverage vector

measured 19 of 19 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-05-10T15:51:05.025343Z

measured 19 of 19 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-23T06:30:58.430688+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

19 of 19 outbound references displayed

verified exact1
verified fuzzy5
unresolved12
parse uncertain0
malformed identifier1
metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 53a30fd7-13ac-42b3-9f4c-e419beb2e9a8 · outbound

This paper cites an unresolved cited work.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning Unresolved cited work

Reference 1

Resolution: unresolved; raw_fallback, observed 2026-05-17T18:25:04.448518Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 635c223e-71ad-4a8c-b8c7-8077fb224546 · outbound

This paper cites an unresolved cited work.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning Unresolved cited work

Reference 2

Resolution: unresolved; raw_fallback, observed 2026-05-17T18:25:04.500207Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 48202e87-4cb2-46db-9c13-ceeb789cb29b · outbound

This paper cites For the benchmark, we believe it is necessary to define a unified length criterion.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning For the benchmark, we believe it is necessary to define a unified length criterion

Reference 3

Resolution: verified fuzzy; raw_fallback, observed 2026-05-17T18:25:04.521396Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 09fa6e82-6920-42a3-8ff1-36464c2c9c5d · outbound

This paper cites an unresolved cited work.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning Unresolved cited work

Reference 4

Resolution: unresolved; raw_fallback, observed 2026-05-17T18:25:04.465637Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation dec38190-6be1-4f74-9531-640540860e46 · outbound

This paper cites highly related.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning highly related

Reference 5

Resolution: verified exact; arxiv_id, observed 2026-05-11T09:46:03.291342Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 370cb3e5-327d-4ad2-afa6-dee5fdd66b9c · outbound

This paper cites an unresolved cited work.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning Unresolved cited work

Reference 6

Resolution: unresolved; raw_fallback, observed 2026-05-17T18:25:04.495593Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 346b611a-0f1d-4d06-8073-4c73ec2a4dd7 · outbound

This paper cites an unresolved cited work.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning Unresolved cited work

Reference 7

Resolution: unresolved; raw_fallback, observed 2026-05-17T18:25:04.513444Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 910bf455-4be0-4411-b107-cfa550299e1b · outbound

This paper cites an unresolved cited work.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning Unresolved cited work

Reference 8

Resolution: unresolved; raw_fallback, observed 2026-05-17T18:25:04.517252Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 70408c28-9b51-4712-ad60-13e82e707fb2 · outbound

This paper cites an unresolved cited work.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning Unresolved cited work

Reference 9

Resolution: unresolved; raw_fallback, observed 2026-05-17T18:25:04.525225Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation f3d500ca-2de4-4a45-97df-fa6e3c278e3e · outbound

This paper cites For MMseqs2-based homology splitting, parameter settings also need to be standardized.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning For MMseqs2-based homology splitting, parameter settings also need to be standardized

Reference 10

Resolution: verified fuzzy; raw_fallback, observed 2026-05-17T18:25:04.461150Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 53ab859d-2ec4-4826-98ca-87b8947d9030 · outbound

This paper cites an unresolved cited work.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning Unresolved cited work

Reference 11

Resolution: unresolved; raw_fallback, observed 2026-05-17T18:25:04.477370Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 31321df7-117a-4118-be40-bf08b5dfb092 · outbound

This paper cites an unresolved cited work.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning Unresolved cited work

Reference 12

Resolution: unresolved; raw_fallback, observed 2026-05-17T18:25:04.473617Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 4fe77502-03c0-4278-a314-f9cec0e98b11 · outbound

This paper cites an unresolved cited work.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning Unresolved cited work

Reference 13

Resolution: unresolved; raw_fallback, observed 2026-05-17T18:25:04.491740Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 4a5c9b32-8382-4792-807d-1f33dbde888e · outbound

This paper cites an unresolved cited work.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning Unresolved cited work

Reference 14

Resolution: unresolved; raw_fallback, observed 2026-05-17T18:25:04.469684Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 397c6884-917d-4a99-a3f3-cd811804e688 · outbound

This paper cites For most datasets in PepBenchData-150, the proportion of sequences longer than 50 residues is below 10% (see Table 7 and Table 8).

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning For most datasets in PepBenchData-150, the proportion of sequences longer than 50 residues is below 10% (see Table 7 and Table 8)

Reference 15

Resolution: verified fuzzy; raw_fallback, observed 2026-05-17T18:25:04.483581Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 6aa4322b-7040-4bbd-8138-c6295dc627ca · outbound

This paper cites an unresolved cited work.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning Unresolved cited work

Reference 16

Resolution: unresolved; raw_fallback, observed 2026-05-17T18:25:04.509888Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 263f7e5b-ff52-483a-9a4f-4a3b0090d656 · outbound

This paper cites The hybrid partition combines the advantages of MMseqs2-split and kmer-split, making it a more challenging partitioning strategy.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning The hybrid partition combines the advantages of MMseqs2-split and kmer-split, making it a more challenging partitioning strategy

Reference 17

Resolution: verified fuzzy; raw_fallback, observed 2026-05-17T18:25:04.506024Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation 66a147b9-c315-47d4-8ccb-236acc89a7b1 · outbound

This paper cites This result is expected, as ESM2-150-F is fine-tuned only on peptide data and thus forgets the protein pre-training knowledge.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning This result is expected, as ESM2-150-F is fine-tuned only on peptide data and thus forgets the protein pre-training knowledge

Reference 18

Resolution: verified fuzzy; raw_fallback, observed 2026-05-17T18:25:04.487757Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Observation dadfddc8-117e-4f1a-b563-da42628135d6 · outbound

This paper cites bbp", official_feature_names=[.

PepBenchmark: A Standardized Benchmark for Peptide Machine Learning bbp", official_feature_names=[

Reference 19

Resolution: malformed identifier; arxiv_id, observed 2026-05-11T09:46:03.283469Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

Pith citing papers

No inbound Pith citation observations are available.