Paper Citation Record · LEDGER

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis

As of 18 August 2026, this Paper Citation Record lists 22 of 22 outbound references and 0 inbound Pith citation observations for arXiv:2607.24111.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2607.24111 v1

Coverage vector

measured 22 of 22 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-07-31T23:04:11.679018Z

measured 22 of 22 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-18T06:34:40.430872+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

22 of 22 outbound references displayed

verified exact17
verified fuzzy0
unresolved5
parse uncertain0
malformed identifier0
metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation a4e2a198-c0bf-49f2-8187-671750cda60d · outbound

This paper cites an unresolved cited work.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis Unresolved cited work

Reference 1

Resolution: unresolved; no resolver link, observed 2026-07-31T23:04:09.683642Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 1c33a45a-4194-4020-80fb-b3c88fc968f5 · outbound

This paper cites and Calteau, A.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis and Calteau, A

Reference 2

Resolution: verified exact; doi, observed 2026-07-31T23:06:20.722939Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 733ba781-2311-4679-bd6c-71acd7d68ea7 · outbound

This paper cites an unresolved cited work.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis Unresolved cited work

Reference 3

Resolution: unresolved; no resolver link, observed 2026-07-31T23:04:09.958731Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 72c05bd8-9702-42e5-8716-1212ad843e08 · outbound

This paper cites an unresolved cited work.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis Unresolved cited work

Reference 4

Resolution: verified exact; doi, observed 2026-07-31T23:06:20.437816Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation c0fc34b4-2dec-4b73-ae39-ae6c13fbd98d · outbound

This paper cites an unresolved cited work.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis Unresolved cited work

Reference 5

Resolution: verified exact; doi, observed 2026-07-31T23:06:20.182919Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 838a42e8-5123-4d42-9add-24a21466cac2 · outbound

This paper cites an unresolved cited work.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis Unresolved cited work

Reference 6

Resolution: verified exact; doi, observed 2026-07-31T23:06:19.931434Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation e962921c-7420-43bd-8954-82bdc4851df7 · outbound

This paper cites M., Hickey, G., Eizenga, J.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis M., Hickey, G., Eizenga, J

Reference 7

Resolution: verified exact; doi, observed 2026-07-31T23:06:19.668106Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation dc142f2e-6568-493f-be11-c9a87b13ae0a · outbound

This paper cites an unresolved cited work.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis Unresolved cited work

Reference 8

Resolution: verified exact; doi, observed 2026-07-31T23:06:19.446979Z

Source-reported events for the cited work

correction dated 2021-12-10. Source: crossref record 10.1371/journal.pcbi.1009687->10.1371/journal.pcbi.1007732:correction, observed 2026-07-11T03:05:32.466839+00:00. This notice travels one citation hop only.

Observation b7721622-9cf0-4b94-b453-e41c1133172b · outbound

This paper cites R., Enns, E., Marinier, E., Mandal, A., Herman, E.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis R., Enns, E., Marinier, E., Mandal, A., Herman, E

Reference 9

Resolution: verified exact; doi, observed 2026-07-31T23:06:19.152838Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation aa23889a-cb5f-4031-bb6d-cce3d1a980a5 · outbound

This paper cites A., Rowe, J., Tomkins-Tinch, C.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis A., Rowe, J., Tomkins-Tinch, C

Reference 10

Resolution: verified exact; doi, observed 2026-07-31T23:06:18.896206Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation c11b1b3c-2a57-49e3-bdfc-42cee77b756e · outbound

This paper cites an unresolved cited work.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis Unresolved cited work

Reference 11

Resolution: unresolved; no resolver link, observed 2026-07-31T23:04:10.891073Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 478327ad-b9d9-46dd-86e4-872db56fea91 · outbound

This paper cites F., Land, M.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis F., Land, M

Reference 12

Resolution: verified exact; doi, observed 2026-07-31T23:06:18.711212Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 13786628-19cb-4be0-a250-55212b938562 · outbound

This paper cites R., Ahn, T.-H., Karpinets, T., Lund, O., Kora, G., Wassenaar, T., Poudel, S., & Ussery, D.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis R., Ahn, T.-H., Karpinets, T., Lund, O., Kora, G., Wassenaar, T., Poudel, S., & Ussery, D

Reference 13

Resolution: verified exact; doi, observed 2026-07-31T23:06:18.493537Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation f464df22-1c52-4690-8cf7-db17f1c03d80 · outbound

This paper cites an unresolved cited work.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis Unresolved cited work

Reference 14

Resolution: verified exact; doi, observed 2026-07-31T23:06:18.314004Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation de624486-ab0a-48db-8243-310f126e9fac · outbound

This paper cites an unresolved cited work.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis Unresolved cited work

Reference 15

Resolution: verified exact; doi, observed 2026-07-31T23:06:18.113453Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation b8a2fe49-6abe-4d8a-aed7-838af58127ee · outbound

This paper cites H., Chuvochina, M., Waite, D.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis H., Chuvochina, M., Waite, D

Reference 16

Resolution: verified exact; doi, observed 2026-07-31T23:06:17.907510Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation d53589e7-4acd-462b-9e8a-fd0e0a5a026c · outbound

This paper cites S., Wang, J.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis S., Wang, J

Reference 17

Resolution: unresolved; no resolver link, observed 2026-07-31T23:04:11.417598Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 14775f08-f57c-4419-8142-c2f7f2f9a6ef · outbound

This paper cites an unresolved cited work.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis Unresolved cited work

Reference 18

Resolution: verified exact; doi, observed 2026-07-31T23:06:17.723148Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 00e42f4e-47ea-401b-8df8-4b349d1e6aee · outbound

This paper cites pan-genome.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis pan-genome

Reference 19

Resolution: unresolved; no resolver link, observed 2026-07-31T23:04:11.530960Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 6b3200e4-ac17-4384-bdef-98edb7c42583 · outbound

This paper cites an unresolved cited work.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis Unresolved cited work

Reference 20

Resolution: verified exact; doi, observed 2026-07-31T23:06:17.498037Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation ff2e46fb-721f-4404-92a4-2cad0418a56a · outbound

This paper cites A., Gladstone, R.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis A., Gladstone, R

Reference 21

Resolution: verified exact; doi, observed 2026-07-31T23:06:17.245927Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 64d86fa3-6c80-4dca-a481-5d32cc2d9d92 · outbound

This paper cites an unresolved cited work.

PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis Unresolved cited work

Reference 22

Resolution: verified exact; doi, observed 2026-07-31T23:06:17.020190Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Pith citing papers

No inbound Pith citation observations are available.