Paper Citation Record · LEDGER

Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks

As of 13 August 2026, this Paper Citation Record lists 12 of 12 outbound references and 3 inbound Pith citation observations for arXiv:2411.13280.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2411.13280 v4

Coverage vector

measured 12 of 12 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-12T16:45:02.953586Z

measured 15 of 15 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-13T06:32:02.005865+00:00

measured 3 of 3 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-06-27T06:47:33.381053Z

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: arxiv_reference, observed 2026-07-03T14:58:33.373873Z

Reference resolution

12 of 12 outbound references displayed

verified exact0
verified fuzzy5
unresolved4
parse uncertain0
malformed identifier3
metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 6873f926-14db-4fdd-ad57-ea4d2250ce5e · outbound

This paper cites Benchmarking Generated Poses: How Rational is Structure-based Drug Design with Generative Models?.

Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks Benchmarking Generated Poses: How Rational is Structure-based Drug Design with Generative Models?

Reference 2

Resolution: unresolved; no resolver link, observed 2026-08-12T16:45:02.908790Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation bec1067a-ea65-40c3-b17e-4bd593379397 · outbound

This paper cites doi: 10.1016/j.sbi.2023.

Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks doi: 10.1016/j.sbi.2023

Reference 3

Resolution: unresolved; no resolver link, observed 2026-08-12T16:45:02.913296Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 2f03b9b2-3dc6-4eeb-8ff1-b4922420b335 · outbound

This paper cites Kong, L., Du, Y ., Mu, W., Neklyudov, K., De Bortol, V ., Wang, H., Wu, D., Ferber, A., Ma, Y .-A., Gomes, C.

Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks Kong, L., Du, Y ., Mu, W., Neklyudov, K., De Bortol, V ., Wang, H., Wu, D., Ferber, A., Ma, Y .-A., Gomes, C

Reference 5

Resolution: unresolved; no resolver link, observed 2026-08-12T16:45:02.922389Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation dcd8c4da-9260-4101-bdca-80c0516c58ca · outbound

This paper cites Qu, Y ., Qiu, K., Song, Y ., Gong, J., Han, J., Zheng, M., Zhou, H., and Ma, W.-Y.

Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks Qu, Y ., Qiu, K., Song, Y ., Gong, J., Han, J., Zheng, M., Zhou, H., and Ma, W.-Y

Reference 8

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T16:45:03.227722Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

Observation 12f8e638-5a18-429c-9428-8a2f2b5c4b8b · outbound

This paper cites Table 12.P-values for pairwise t-tests.

Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks Table 12.P-values for pairwise t-tests

Reference 1000

Resolution: malformed identifier; raw_fallback, observed 2026-08-12T16:45:03.063548Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

Observation d74109fc-26f9-4207-b15b-331d64a59205 · outbound

This paper cites Olivecrona, M., Blaschke, T., Engkvist, O., and Chen, H.

Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks Olivecrona, M., Blaschke, T., Engkvist, O., and Chen, H

Reference 2020

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T16:45:03.253624Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

Observation 7d0136ef-963e-4ea4-a795-eca8d2f1f21c · outbound

This paper cites me-better.

Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks me-better

Reference 2021

Resolution: malformed identifier; raw_fallback, observed 2026-08-12T16:45:03.215165Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

Observation e5ea3341-44c7-4ff3-b67d-92f784f4d805 · outbound

This paper cites Pinheiro, P.

Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks Pinheiro, P

Reference 2022

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T16:45:03.240715Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

Observation 81e08c99-831c-47df-8eca-b777c190b2db · outbound

This paper cites Halgren, T.

Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks Halgren, T

Reference 2023

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T16:45:03.279003Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

Observation f029884a-e7f5-4774-94fa-0ea280656f8e · outbound

This paper cites Structure-based Drug Design with Equivariant Diffusion Models.

Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks Structure-based Drug Design with Equivariant Diffusion Models

Reference 2024

Resolution: unresolved; no resolver link, observed 2026-08-12T16:45:02.940467Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 07708bf3-afdb-4fef-94c7-df0b1e8b4d98 · outbound

This paper cites DecompOpt: Controllable and Decomposed Diffusion Models for Structure-based Molecular Optimization.

Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks DecompOpt: Controllable and Decomposed Diffusion Models for Structure-based Molecular Optimization

Reference 2025

Resolution: malformed identifier; no resolver link, observed 2026-08-12T16:45:02.944695Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 56bc02b1-c29e-46e6-a925-3adc73e43829 · outbound

This paper cites Kong, L., Cui, J., Sun, H., Zhuang, Y ., Prakash, B.

Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks Kong, L., Cui, J., Sun, H., Zhuang, Y ., Prakash, B

Reference 2332

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T16:45:03.265884Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

Pith citing papers

Observation e24d569a-1872-4d29-b5ea-760604294aea · inbound

Observation-Aligned Mask Priors for Learning Physical Dynamics from Authentic Occlusions cites this paper.

Observation-Aligned Mask Priors for Learning Physical Dynamics from Authentic Occlusions Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks

Reference 25

Resolution: verified exact; arxiv_id, observed 2026-05-19T21:02:47.323126Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

Observation 819a77ca-60fd-4338-b7ee-f17f2b7aa017 · inbound

Fine-tuning Pocket-Aware Diffusion Models via Denoising Policy Optimization cites this paper.

Fine-tuning Pocket-Aware Diffusion Models via Denoising Policy Optimization Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks

Reference 10

Resolution: verified exact; arxiv_id, observed 2026-05-20T13:33:19.215881Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.

Observation eb1e756d-825e-43cd-ab7c-ce71ee9d8be3 · inbound

APCyc: Property-Informed Design of Cyclic Peptides via Automated Cyclization cites this paper.

APCyc: Property-Informed Design of Cyclic Peptides via Automated Cyclization Empower Structure-Based Molecule Optimization with Gradient Guided Bayesian Flow Networks

Reference 41

Resolution: verified exact; arxiv_id, observed 2026-07-03T14:58:33.375388Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-13T06:32:02.005865+00:00.