Paper Citation Record · LEDGER

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction

As of 10 August 2026, this Paper Citation Record lists 35 of 35 outbound references and 0 inbound Pith citation observations for arXiv:2607.22549.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2607.22549 v1

Coverage vector

measured 35 of 35 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-02T14:22:11.101284Z

measured 35 of 35 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-10T06:31:04.303077+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

35 of 35 outbound references displayed

verified exact8
verified fuzzy0
unresolved25
parse uncertain0
malformed identifier2
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External citation measurements

No source-named external measurement is stored.

Outbound references

Observation c344da7c-3de9-4b0a-82e4-32e38a7e5d20 · outbound

This paper cites Accurate structure prediction of biomolecular interactions with AlphaFold 3,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Accurate structure prediction of biomolecular interactions with AlphaFold 3,

Reference 1

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:07.625332Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 6d1b4d89-7e05-47b7-9564-a919e02bdb9d · outbound

This paper cites How good are AlphaFold models for docking-based virtual screening?.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction How good are AlphaFold models for docking-based virtual screening?

Reference 2

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:07.747033Z

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Observation 53e16585-37a1-43c3-b536-bc76de42c18b · outbound

This paper cites Challenging AlphaFold in predicting proteins with large- scale allosteric transitions,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Challenging AlphaFold in predicting proteins with large- scale allosteric transitions,

Reference 3

Resolution: verified exact; doi, observed 2026-08-02T14:23:25.746883Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation e3286eb4-2052-492f-b340-9a9eba0abead · outbound

This paper cites Assessment of protein complex predictions in casp16: Are we making progress?.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Assessment of protein complex predictions in casp16: Are we making progress?

Reference 4

Resolution: verified exact; doi, observed 2026-08-02T14:23:25.594067Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation d9096e01-5202-410b-aa6d-ea0d3685f94d · outbound

This paper cites Resource- efficient quantum algorithm for protein folding,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Resource- efficient quantum algorithm for protein folding,

Reference 5

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:08.188768Z

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Unavailable: canonical work link unavailable.

Observation 72836d2f-0c6b-43c6-a140-9de034672a6b · outbound

This paper cites Large language model agents for biological intelligence across genomics, proteomics, spatial biology, and biomedicine,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Large language model agents for biological intelligence across genomics, proteomics, spatial biology, and biomedicine,

Reference 6

Resolution: verified exact; doi, observed 2026-08-02T14:23:25.443908Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 87144c9f-8713-4396-966b-8c28c621e1e4 · outbound

This paper cites Artificial intelligence agents for biological research: a survey,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Artificial intelligence agents for biological research: a survey,

Reference 7

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:08.435292Z

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Observation cce5895c-6a42-48b7-ba73-452f7742a4dc · outbound

This paper cites Qwen3.5: Towards native multimodal agents,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Qwen3.5: Towards native multimodal agents,

Reference 8

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:08.530826Z

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Unavailable: canonical work link unavailable.

Observation cbc101e2-caf1-4330-a49b-4c560548949b · outbound

This paper cites GPT-4o System Card.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction GPT-4o System Card

Reference 9

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:08.654469Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 0cd64ff6-64a1-4998-a462-bb23cbaed647 · outbound

This paper cites Introducing gpt-5.2,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Introducing gpt-5.2,

Reference 10

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:08.746552Z

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Observation 5f85e9e2-bd4d-4a32-9fea-f636a661b1e0 · outbound

This paper cites Qdockbank: A dataset for ligand docking on protein fragments predicted on utility-level quantum computers,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Qdockbank: A dataset for ligand docking on protein fragments predicted on utility-level quantum computers,

Reference 11

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:08.826421Z

Source-reported events for the cited work

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Observation 49252698-870a-4806-948a-71e0d2620a94 · outbound

This paper cites Methods of protein structure comparison,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Methods of protein structure comparison,

Reference 12

Resolution: verified exact; doi, observed 2026-08-02T14:23:25.269030Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 662f87dd-0d4f-4323-94f8-608f5e3d48ad · outbound

This paper cites The variational quantum eigensolver: A review of methods and best practices,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction The variational quantum eigensolver: A review of methods and best practices,

Reference 13

Resolution: verified exact; doi, observed 2026-08-02T14:23:25.125644Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 418d3985-2504-4d6d-83eb-4237b8c053da · outbound

This paper cites Ai agent systems: Architectures, applications, and evaluation,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Ai agent systems: Architectures, applications, and evaluation,

Reference 14

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:09.110349Z

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Observation 8e164438-2b47-44ad-866b-e87030ef1675 · outbound

This paper cites A self-correcting multi-agent LLM framework for language-based physics simulation and explanation,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction A self-correcting multi-agent LLM framework for language-based physics simulation and explanation,

Reference 15

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:09.202296Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 48401425-5a7f-44c5-bbc9-56c9b6fd94bc · outbound

This paper cites Verification-aware planning for multi-agent systems,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Verification-aware planning for multi-agent systems,

Reference 16

Resolution: malformed identifier; no resolver link, observed 2026-08-02T14:22:09.267075Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation e51f5f03-2f17-4b69-965a-5851e7bfe5c7 · outbound

This paper cites Artificial intelligence for quantum computing,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Artificial intelligence for quantum computing,

Reference 17

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:09.330997Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 0d46a81c-6e8f-452e-a509-84528bb73dbe · outbound

This paper cites Quantum agents,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Quantum agents,

Reference 18

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:09.418802Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 1fd32df0-303c-40d9-af52-c29e35767297 · outbound

This paper cites Programming Quantum Computers with Large Language Models.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Programming Quantum Computers with Large Language Models

Reference 19

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:09.501106Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation dd3f65e0-4706-4581-bbf9-cb68c15395e5 · outbound

This paper cites Finding low-energy conformations of lattice protein models by quantum annealing,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Finding low-energy conformations of lattice protein models by quantum annealing,

Reference 20

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:09.579760Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation e478eedf-5b26-4d5f-9902-626425900f04 · outbound

This paper cites A quantum alternating operator ansatz with hard and soft constraints for lattice protein folding.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction A quantum alternating operator ansatz with hard and soft constraints for lattice protein folding

Reference 21

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:09.661159Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 4ebbe4e5-2cb6-4abc-9507-2e50f6cf42b9 · outbound

This paper cites Peptide conformational sampling using the Quantum Approximate Optimization Algorithm,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Peptide conformational sampling using the Quantum Approximate Optimization Algorithm,

Reference 22

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:09.721289Z

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Unavailable: canonical work link unavailable.

Observation 28136408-9f78-4e82-8329-5dc4600efdd5 · outbound

This paper cites Quantum-audit: Evaluating the reasoning limits of llms on quantum computing,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Quantum-audit: Evaluating the reasoning limits of llms on quantum computing,

Reference 23

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:09.867142Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 3ddc4d64-e901-4f6e-838f-218c510b9c7c · outbound

This paper cites A perspective on protein structure prediction using quantum computers,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction A perspective on protein structure prediction using quantum computers,

Reference 24

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:10.036215Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation ed3e51c6-f004-4208-ab36-d6321c3dd2f8 · outbound

This paper cites Folding lattice proteins with quantum annealing,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Folding lattice proteins with quantum annealing,

Reference 25

Resolution: verified exact; doi, observed 2026-08-02T14:23:24.819861Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation f3f154d5-a4e0-430f-a6ba-c4457b47df13 · outbound

This paper cites Quantum optimization within lattice gauge theory model on a quantum simulator,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Quantum optimization within lattice gauge theory model on a quantum simulator,

Reference 26

Resolution: verified exact; doi, observed 2026-08-02T14:23:24.583480Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 14972c70-1d77-4576-8b5a-a4dbe27acfac · outbound

This paper cites Comparative protein modelling by satisfaction of spatial restraints,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Comparative protein modelling by satisfaction of spatial restraints,

Reference 27

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:10.437678Z

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Observation a0377561-1ff4-4fad-a5c8-d2f31031c187 · outbound

This paper cites A direct search optimization method that models the objective and constraint functions by linear interpolation,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction A direct search optimization method that models the objective and constraint functions by linear interpolation,

Reference 28

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:10.542036Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 536dfde1-efad-468f-bd8a-ca838668be15 · outbound

This paper cites Autodock vina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Autodock vina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading,

Reference 29

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:10.617532Z

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Unavailable: canonical work link unavailable.

Observation e0cab378-fa44-4da8-b040-e544da623360 · outbound

This paper cites Molprobity: More and better reference data for improved all-atom structure validation,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Molprobity: More and better reference data for improved all-atom structure validation,

Reference 30

Resolution: verified exact; doi, observed 2026-08-02T14:23:24.361031Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 30c2b485-ea5f-4435-bc3d-fc155b13e87e · outbound

This paper cites Judging LLM-as-a-Judge with MT-Bench and Chatbot Arena.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Judging LLM-as-a-Judge with MT-Bench and Chatbot Arena

Reference 31

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:10.793472Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 0a776bd8-77bc-410b-990f-dc6b68a34d84 · outbound

This paper cites Individual comparisons by ranking methods,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Individual comparisons by ranking methods,

Reference 32

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:10.855399Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation b6fca27a-3fd0-40f5-b349-be7277377757 · outbound

This paper cites A solution for the best rotation to relate two sets of vectors,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction A solution for the best rotation to relate two sets of vectors,

Reference 33

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:10.918608Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation a1a07f6d-55e2-4673-a55f-d946fe564885 · outbound

This paper cites IBM Quantum breaks the 100-qubit processor barrier,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction IBM Quantum breaks the 100-qubit processor barrier,

Reference 34

Resolution: unresolved; no resolver link, observed 2026-08-02T14:22:11.018514Z

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Unavailable: canonical work link unavailable.

Observation 600e6e29-5ef8-4a35-b10c-df525f678a59 · outbound

This paper cites Evidence for the utility of quantum computing before fault tolerance,.

QFoldAgent: An Autonomous Quantum Optimization Multi-Agent System for Protein Structure Prediction Evidence for the utility of quantum computing before fault tolerance,

Reference 35

Resolution: malformed identifier; no resolver link, observed 2026-08-02T14:22:11.101284Z

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Pith citing papers

No inbound Pith citation observations are available.