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Paper Citation Record · LEDGER

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints

As of 10 August 2026, this Paper Citation Record lists 56 of 56 outbound references and 2 inbound Pith citation observations for arXiv:2507.04225.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2507.04225 v2

Coverage vector

measured 56 of 56 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-06T20:02:06.059534Z

measured 58 of 58 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-09T06:31:02.800959+00:00

measured 2 of 2 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-08-03T06:31:12.721507Z

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: arxiv_reference, observed 2026-05-25T02:46:33.498536Z

Reference resolution

56 of 56 outbound references displayed

  • verified exact3
  • verified fuzzy29
  • unresolved24
  • parse uncertain0
  • malformed identifier0
  • metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 4cbb424f-8db8-46fb-b5c2-b400bc5d39c3 · outbound

This paper cites write newline.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints write newline

Reference 1

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:01.901982Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:01.901982Z digest=sha256:0e231e8c0b6320cf268b3e2090e1ecf0c1a747c198d473d64c56da16229ee907

Observation 34140849-5d4d-48c9-8202-c85038de4b79 · outbound

This paper cites Protein Structure and Sequence Generation with Equivariant Denoising Diffusion Probabilistic Models.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Protein Structure and Sequence Generation with Equivariant Denoising Diffusion Probabilistic Models

Reference 2

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:01.966088Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:01.966088Z digest=sha256:83db8dad892d21c7cbfcbc75c21a2d8aca71de440b791b133926b598e92413c2

Observation 09d4a3eb-90ef-4164-b547-bc9989d9b076 · outbound

This paper cites Equivariant Energy-Guided SDE for Inverse Molecular Design.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Equivariant Energy-Guided SDE for Inverse Molecular Design

Reference 3

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:02.074643Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:02.074643Z digest=sha256:8f504a94ec093d07d211937f0d1d396913a4a38e0323ff283a4e72d56289a8f2

Observation 6b605edb-e082-44b7-97c6-94083abc7e13 · outbound

This paper cites an unresolved cited work.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Unresolved cited work

Reference 4

Resolution
unresolved
raw_fallback, observed 2026-08-06T20:02:12.160813Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:02.153093Z digest=sha256:2d6701492cc0f80f95d521d1030aef43848e76341a8ca9e1c9c09e0adc29839a

Observation 6be4be12-d53a-4209-8782-8ced1d319857 · outbound

This paper cites and Nichol, A.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints and Nichol, A

Reference 5

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:02.228051Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:02.228051Z digest=sha256:fd94e0c50e53ddcc0d7e7c5779d4615d0a89f4d399d6a33ddf99ad7a0a771006

Observation 60710bdb-fc40-42f3-b673-f723d4a5eb00 · outbound

This paper cites and Hoffmann, T.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints and Hoffmann, T

Reference 6

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:12.127382Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:02.298041Z digest=sha256:387e4c4984cb6318412143e54f0c07330f77046c56151376088188675f777599

Observation cc038b4f-1802-4b95-8e7e-229206867423 · outbound

This paper cites and Ryde, U.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints and Ryde, U

Reference 7

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:12.104977Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:02.373013Z digest=sha256:ea39934b4e25315a7872b3df46b9cb8bba0997ef1765a9140eae5611cd000f95

Observation 60d5efeb-7f6f-4da6-bbf7-2e760bb33dfb · outbound

This paper cites Efficient simulation of inextensible cloth.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Efficient simulation of inextensible cloth

Reference 8

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:12.083596Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:02.455311Z digest=sha256:0266ffcad16d466a68d0f71788ef304b597ba193d0937d17030706aafaf3c005

Observation 8cad18af-d203-49cf-8c56-f55a9bfdd2e6 · outbound

This paper cites A Survey of Geometric Graph Neural Networks: Data Structures, Models and Applications.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints A Survey of Geometric Graph Neural Networks: Data Structures, Models and Applications

Reference 9

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:02.523309Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:02.523309Z digest=sha256:bf263261248f2ee5e61cf87b2f81b9a4306fe8622fc9892d50d3704dfca6a1a2

Observation f082a328-9bda-49c3-9903-d6912348be81 · outbound

This paper cites Geometric trajectory diffusion models.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Geometric trajectory diffusion models

Reference 10

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:12.063926Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:02.594217Z digest=sha256:c53094afd12d0c97a03b5659ea534e929114907f22157adc285d2056faa271cc

Observation 1474221c-1290-457d-aa02-6771466ed22c · outbound

This paper cites Classifier-Free Diffusion Guidance.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Classifier-Free Diffusion Guidance

Reference 11

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:02.652090Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:02.652090Z digest=sha256:0f9aea34538cbb73ceb121690f3383274ccecf7567680f1dadbd6e7f4a4b856c

Observation f7267f55-e8ea-4409-91f5-2261a6db2fe4 · outbound

This paper cites Denoising diffusion probabilistic models.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Denoising diffusion probabilistic models

Reference 12

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:02.743124Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:02.743124Z digest=sha256:6bef01206fba53c2a4e9b8adf8be6b9477eddfd37ab158e836cdb9f1a4fa56a0

Observation eb157c19-dde7-4278-82be-b505877e9a45 · outbound

This paper cites an unresolved cited work.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Unresolved cited work

Reference 13

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:02.826602Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:02.826602Z digest=sha256:cd5ecbc65fda0f00c00227182df9f406b44455349c3a5d04ce9560bc89cb495d

Observation 71d920cb-8a44-4a62-a676-4c1aced54995 · outbound

This paper cites R., Craven, T.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints R., Craven, T

Reference 14

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:12.015261Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:02.899932Z digest=sha256:7e7b9adda6f07e95e5e5104e2f9bbf57a55e2573b671ae9fb5bafebcad62ad19

Observation 8f42cabc-e178-4f01-8eb8-bd2e50e82cc8 · outbound

This paper cites Composer: Creative and Controllable Image Synthesis with Composable Conditions.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Composer: Creative and Controllable Image Synthesis with Composable Conditions

Reference 15

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:02.975251Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:02.975251Z digest=sha256:c47b99d87cdea50e286696ec0cf1a66b1f32a238aa3f943e198edaf777ee8c11

Observation ca59ab2d-84f6-4ead-be0a-e50085876ac9 · outbound

This paper cites L., and Heinis, C.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints L., and Heinis, C

Reference 16

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:11.997097Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:03.028173Z digest=sha256:5fd8c7d179f4e517284850d56562f24fef0c3b20d5ef3b817b16c0d4973345ae

Observation ec2a4d20-ba6d-4957-a09d-3065936e0061 · outbound

This paper cites ODE-DPS: ODE-based Diffusion Posterior Sampling for Inverse Problems in Partial Differential Equation.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints ODE-DPS: ODE-based Diffusion Posterior Sampling for Inverse Problems in Partial Differential Equation

Reference 17

Resolution
verified exact
local_arxiv, observed 2026-08-06T20:02:06.581986Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:03.102803Z digest=sha256:0eb8a4e37045233ab520c0150cd964ce30391360d8dd3283528a5ccd9682db99

Observation bfdbf97e-1126-43e8-9836-757f75c1681e · outbound

This paper cites L., Chandrasekhar, J., Madura, J.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints L., Chandrasekhar, J., Madura, J

Reference 18

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:11.979096Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:03.176533Z digest=sha256:ae552c9dabadcb93d5483834685b2299c42fd028e3e3907c5af3669e87397a3d

Observation 58e99046-85a7-481b-8691-b97d6cb10fb7 · outbound

This paper cites Denoising diffusion restoration models.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Denoising diffusion restoration models

Reference 19

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:11.893297Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:03.266969Z digest=sha256:512b5a2843f70bd7bb9d05b37c7423d95d6c278b763f2b7c3b3d01b8d94fe5b3

Observation 8a500279-d1b5-423a-b373-8486b3e919fe · outbound

This paper cites End-to-End Full-Atom Antibody Design.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints End-to-End Full-Atom Antibody Design

Reference 20

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:03.322472Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:03.322472Z digest=sha256:26ee69e09f24b044717de532bd9140577813612389df571ca40f4fd39b4402bb

Observation 226fd5bd-eb4e-4dbe-a38e-0369b452ad50 · outbound

This paper cites Full-Atom Peptide Design with Geometric Latent Diffusion.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Full-Atom Peptide Design with Geometric Latent Diffusion

Reference 21

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:03.437783Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:03.437783Z digest=sha256:027ed4bf2850241fcf0cb2402f5e7075c68d317e36763f1b23c8dd47957b79bd

Observation 7eaacd0c-efa1-47d5-8dbc-a284a88771a3 · outbound

This paper cites C.-L., Harris, J.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints C.-L., Harris, J

Reference 22

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:11.733260Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:03.480473Z digest=sha256:fb2f6b0b550ea5fcfbbdd108b3cadb1b9f1e3b3eb64216efe2b2d6ca9cb3add0

Observation 0f34bebf-974f-492b-8b72-6b8e636a6c57 · outbound

This paper cites Hotspot-Driven Peptide Design via Multi-Fragment Autoregressive Extension.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Hotspot-Driven Peptide Design via Multi-Fragment Autoregressive Extension

Reference 23

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:03.583471Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:03.583471Z digest=sha256:5f82ea8815a706d40d2f64ec42dfbf3f74ee2d1c975528dd5de6b688d016e4c2

Observation 22e3dcab-2117-4f20-9255-30f13bc3caf2 · outbound

This paper cites Full-atom peptide design based on multi-modal flow matching.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Full-atom peptide design based on multi-modal flow matching

Reference 24

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:11.560974Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:03.673608Z digest=sha256:4f6005303a981601236df618f47de95d488e0b1aed4b5d4d01916a80af52afa1

Observation e8f7fa10-adf0-4f42-9e20-c316d1ca4b4a · outbound

This paper cites Delineating the stepwise millisecond allosteric activation mechanism of the class c gpcr dimer mglu5.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Delineating the stepwise millisecond allosteric activation mechanism of the class c gpcr dimer mglu5

Reference 25

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:11.412346Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:03.760163Z digest=sha256:dd6234251febad02696e79bc4fe01fe9e36e4243ca5cee32668c8085ba838517

Observation 0bda67b6-0783-4b11-9419-f303a9f37579 · outbound

This paper cites an unresolved cited work.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Unresolved cited work

Reference 26

Resolution
unresolved
raw_fallback, observed 2026-08-06T20:02:11.203512Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:03.848438Z digest=sha256:d92c352cd70aec82cc8d07ef69b0ae246309c48a75394e17aedba8be2a3fa28e

Observation 30dd1d8e-bb24-4163-aa6c-02a1fd7922b0 · outbound

This paper cites Evolutionary-scale prediction of atomic-level protein structure with a language model.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Evolutionary-scale prediction of atomic-level protein structure with a language model

Reference 27

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:03.920942Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:03.920942Z digest=sha256:69333cd6314fe06a8f92ca52f00433a5a9175a0e9d4ed7c2734d7186e026ed6b

Observation 578b1f0b-ba2b-42c0-be28-d213b26a8c45 · outbound

This paper cites an unresolved cited work.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Unresolved cited work

Reference 28

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:03.978839Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:03.978839Z digest=sha256:f5da5102f393a3c4dbf8eaddc518913aa9e5d5f09d6c6b5218721a972bec3b0f

Observation 5a3cf4dd-e00e-4855-99b9-92659e19f07b · outbound

This paper cites Antigen-specific antibody design and optimization with diffusion-based generative models for protein structures.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Antigen-specific antibody design and optimization with diffusion-based generative models for protein structures

Reference 29

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:10.996377Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:04.065347Z digest=sha256:7b1054ff93b621a33382abbf9b30db44ec31875974fac64440de5abc80f456bf

Observation 28074fc9-2f5f-4c7d-8210-acdb7ca2ed4d · outbound

This paper cites A., Martinez, C., Kasavajhala, K., Wickstrom, L., Hauser, K.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints A., Martinez, C., Kasavajhala, K., Wickstrom, L., Hauser, K

Reference 30

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:10.813378Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:04.120096Z digest=sha256:b4a956e69dbcd97999ab749131faf01ed90c58e74403c76f7c00055d95191f47

Observation bd01526f-29e9-440c-a91f-f7b0fd3f1752 · outbound

This paper cites Equivariant Blurring Diffusion for Hierarchical Molecular Conformer Generation.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Equivariant Blurring Diffusion for Hierarchical Molecular Conformer Generation

Reference 31

Resolution
verified exact
local_arxiv, observed 2026-08-06T20:02:06.404077Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:04.224874Z digest=sha256:74e15959476a935ce1d40b160f12fa43bd1153d733682f6976a7248750bbb7ad

Observation 118d729f-e244-4642-8780-22a51b064dd9 · outbound

This paper cites F., Zhao, Q., Leveille, A., Liu, A., Bera, A., Wilms, J., \"U ffing, A., et al.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints F., Zhao, Q., Leveille, A., Liu, A., Bera, A., Wilms, J., \"U ffing, A., et al

Reference 32

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:10.609628Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:04.313173Z digest=sha256:e2ceb151f71a1265e470ca4abd5c4ff3c7935c4292a17ab65df501a1b74dc6f0

Observation bc111f5a-e544-41b7-b437-d1dc08ff8749 · outbound

This paper cites High-resolution image synthesis with latent diffusion models.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints High-resolution image synthesis with latent diffusion models

Reference 33

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:10.358432Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:04.388357Z digest=sha256:3e2ed70b78c2dbacf72ee97171d32b96a60ff613e1b73ab93dde535acc87e2a6

Observation 5d605556-c329-4acc-982f-cd9535c99896 · outbound

This paper cites an unresolved cited work.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Unresolved cited work

Reference 34

Resolution
unresolved
raw_fallback, observed 2026-08-06T20:02:10.173167Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:04.442289Z digest=sha256:41370e9f2b395dceaaa4d3fa233557e407c2e36101f430e4fde11eabad40e094

Observation c110788a-a119-44ce-95a5-013c10e4dbe7 · outbound

This paper cites CADS: Unleashing the Diversity of Diffusion Models through Condition-Annealed Sampling.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints CADS: Unleashing the Diversity of Diffusion Models through Condition-Annealed Sampling

Reference 35

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:04.533475Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:04.533475Z digest=sha256:79e0bdb793a0618cf930b61b2a768d42106d1138c7a9163af0c8769886523049

Observation 7fd87db0-01e3-4ea0-a406-4b015ba227da · outbound

This paper cites W., Poole, D., Le Grand, S., and Walker, R.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints W., Poole, D., Le Grand, S., and Walker, R

Reference 36

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:09.888092Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:04.610761Z digest=sha256:0bd2dc9082cf5ae21d8d16b20407cdab662e194cbaf4e85beaf1694281c6dd45

Observation 01bcf690-a684-4c7c-8cba-ce29ae149af1 · outbound

This paper cites G., Hoogeboom, E., and Welling, M.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints G., Hoogeboom, E., and Welling, M

Reference 37

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:09.624730Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:04.809684Z digest=sha256:efccb60970cabeb120366baf2b451fad0898723ee9290b7cc2d001a494abec1f

Observation 9dbadf83-7c90-4b59-a35e-ef81e0112dce · outbound

This paper cites u tt, K. T., Sauceda, H. E., Kindermans, P.-J., Tkatchenko, A., and M \.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints u tt, K. T., Sauceda, H. E., Kindermans, P.-J., Tkatchenko, A., and M \

Reference 38

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:09.428978Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:05.009278Z digest=sha256:d064c8fe0271980e41e5d8a57abaf76069e16431a711ceb0e335c0d094bd8b71

Observation 7d405782-29b3-47dc-9cc4-77801356cbe3 · outbound

This paper cites M., Zhang, Z., Hu, X., Qu, Q., and Shen, L.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints M., Zhang, Z., Hu, X., Qu, Q., and Shen, L

Reference 39

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:09.272760Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:05.153759Z digest=sha256:aa6ad0f617ba1108e8d6a7f11ffcca0811608d607d64be8146a1515202d9603c

Observation 6d16f081-ec46-47c0-92d9-dd861434bba2 · outbound

This paper cites Denoising diffusion implicit models.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Denoising diffusion implicit models

Reference 40

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:09.044640Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:05.188480Z digest=sha256:0e02e10e034ff8392bc914668ccff4b0c150235c974d5cc113a1d99a9104a134

Observation 23744de9-0cf4-4a04-8a12-75a7c48ac052 · outbound

This paper cites Loss-guided diffusion models for plug-and-play controllable generation.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Loss-guided diffusion models for plug-and-play controllable generation

Reference 41

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:08.851796Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:05.241719Z digest=sha256:c316193d5967d208e2dc713c659f4b8be89618edec7c0b2eaa6fa16faabb0b56

Observation d6ea6430-284a-4a3a-bf0b-506f348810b8 · outbound

This paper cites Score-Based Generative Modeling through Stochastic Differential Equations.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Score-Based Generative Modeling through Stochastic Differential Equations

Reference 42

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:05.328305Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:05.328305Z digest=sha256:ab0d13fed5ed11bc779bb451e18d02f64d50506edb028f60728180a784c2c04c

Observation b5de83d8-cae1-40f8-a9bb-6fc226a27cea · outbound

This paper cites Solving Inverse Problems in Medical Imaging with Score-Based Generative Models.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Solving Inverse Problems in Medical Imaging with Score-Based Generative Models

Reference 43

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:05.384356Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:05.384356Z digest=sha256:2e087a5cb37bfce449641d59a3c22117b8c1e25fd8d523e4005b0e3ed30ee162

Observation 1be2e8fc-135d-459a-b9ce-3662208f4ceb · outbound

This paper cites an unresolved cited work.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Unresolved cited work

Reference 44

Resolution
unresolved
raw_fallback, observed 2026-08-06T20:02:08.640669Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:05.452689Z digest=sha256:40e0ea49b21a65859f66a6fd947030a7d30662a1f62a341630226607db7ac05b

Observation 10f80697-e1f5-4047-9a0e-bcb78c6d7bd2 · outbound

This paper cites K., Avraham, O., Ben-Aharon, Z., Khramushin, A., and Schueler-Furman, O.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints K., Avraham, O., Ben-Aharon, Z., Khramushin, A., and Schueler-Furman, O

Reference 45

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:08.458541Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:05.506333Z digest=sha256:2d61aea9fa4d99efdb49d069da729d1cbd16ad4568523b0fb5c51361392066eb

Observation 033c1c31-f037-4361-b15e-ad216471b86d · outbound

This paper cites and Hinton, G.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints and Hinton, G

Reference 46

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:05.557561Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:05.557561Z digest=sha256:6d216b6fccdfd2426e2ddc6e30968c862dbbb9f945b86ad87b42c1d0adc2e560

Observation 6000ed49-ba91-4a2b-86c5-817ad84d9f4c · outbound

This paper cites Target-Specific De Novo Peptide Binder Design with DiffPepBuilder.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Target-Specific De Novo Peptide Binder Design with DiffPepBuilder

Reference 47

Resolution
verified exact
local_arxiv, observed 2026-08-06T20:02:06.227521Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:05.610811Z digest=sha256:060d8984a7da9899f63a559c5ee010f940352a287b87f87681ccbb9e4177ff85

Observation 0d082986-c0e7-47b9-a787-d33a7ca1730c · outbound

This paper cites Target-specific de novo peptide binder design with diffpepbuilder.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Target-specific de novo peptide binder design with diffpepbuilder

Reference 48

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:08.128190Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:05.677620Z digest=sha256:38d8edfa56231caf906614efcc5ae10eb3a41ad7ee30d96112c33509d5f4d527

Observation 69ce5cf0-9a34-425d-95c3-7763a3c5392c · outbound

This paper cites L., Juergens, D., Bennett, N.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints L., Juergens, D., Bennett, N

Reference 49

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:05.730629Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:05.730629Z digest=sha256:5b167c2e69bec6af1e1c650e01973fac24510ef24b8ca87cb7ac0b09a2d8a065

Observation b37ef749-023a-4334-a668-99d37d5993fd · outbound

This paper cites Geodiff: A geometric diffusion model for molecular conformation generation.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Geodiff: A geometric diffusion model for molecular conformation generation

Reference 50

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:07.898399Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:05.774701Z digest=sha256:429dfbd9fa6e2850fe73dc8b40f0d3859d803d35e2251d6dcef1defb3fe7c88e

Observation cf7bc768-02dc-4b61-842b-3ad6445c4ece · outbound

This paper cites Geometric latent diffusion models for 3d molecule generation.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Geometric latent diffusion models for 3d molecule generation

Reference 51

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:07.719645Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:05.828128Z digest=sha256:df0b67303ef18be86866505809b0d966975a30706842a3056e1c85e9cb29bf4a

Observation ef1dcb8c-6203-4a43-9f9b-a6ae2cc419cc · outbound

This paper cites Learning physical constraints with neural projections.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Learning physical constraints with neural projections

Reference 52

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:07.482400Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:05.861782Z digest=sha256:e2f8cd16343c9869230244a47f0a33247a74d7ca05472810ce117fc4b689791b

Observation 922e3ab7-2b8e-4398-94b9-d6c2fd9284d0 · outbound

This paper cites TFG : Unified training-free guidance for diffusion models.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints TFG : Unified training-free guidance for diffusion models

Reference 53

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:07.299962Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:05.913364Z digest=sha256:fc8ee359c899c1347b9a7698441ea9a4852cf7a10b4083c979a8901851d530d2

Observation 4ea59277-8504-47e2-a5ca-fb2eebcf123e · outbound

This paper cites SE(3) diffusion model with application to protein backbone generation.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints SE(3) diffusion model with application to protein backbone generation

Reference 54

Resolution
unresolved
no resolver link, observed 2026-08-06T20:02:05.971519Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=arxiv_source observed=2026-08-06T20:02:05.971519Z digest=sha256:809cbbee06dfedb61a843a5240eb28653c9ec4f67f6ce70585a4388babed1f80

Observation cff0cd12-ee27-4043-bb4f-e4ca0a9a9689 · outbound

This paper cites and Chen, S.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints and Chen, S

Reference 55

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:07.097733Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:06.010489Z digest=sha256:0d7b036ad63ed5240bdb3206614c97c7af35ea8a2f9bdfd92e1d97840ebdb575

Observation c6c2b654-6506-4d35-8a00-28a6e72c4453 · outbound

This paper cites Cyclic peptide therapeutics: past, present and future.

Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Cyclic peptide therapeutics: past, present and future

Reference 56

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:02:06.876354Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-08-06T20:02:06.059534Z digest=sha256:7e404a031529adef8ca745257e55fbf15ed63f6693d7e05aea37db92640c280b

Pith citing papers

Observation c4997f16-9f88-4114-941f-bd6221d7013b · inbound

MuCO: Generative Peptide Cyclization Empowered by Multi-stage Conformation Optimization cites this paper.

MuCO: Generative Peptide Cyclization Empowered by Multi-stage Conformation Optimization Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints

Reference 2

Resolution
unresolved
no resolver link, observed 2026-08-03T06:31:12.721507Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-03T06:31:12.721507Z digest=sha256:a1f2298f0120c050e80673749035e0f0ec6f2464f1558a2ebd1a854aa1ddf074

Observation 6d3a3422-8183-45e7-a879-c99820c53cf1 · inbound

GeoCycler: Reward-Aligned 3D Diffusion for Constraint-Conditioned Cyclic Peptide Design cites this paper.

GeoCycler: Reward-Aligned 3D Diffusion for Constraint-Conditioned Cyclic Peptide Design Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints

Reference 62

Resolution
verified exact
arxiv_id, observed 2026-05-25T02:46:33.501329Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=arxiv_source observed=2026-05-25T02:46:03.894997Z digest=sha256:100a182717eacf7722ad06b6b99fe7847cba25de560467668a69d3651b0c411f