Paper Citation Record · LEDGER

Diffusion Decoding for Peptide De Novo Sequencing

As of 10 August 2026, this Paper Citation Record lists 16 of 16 outbound references and 0 inbound Pith citation observations for arXiv:2507.10955.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2507.10955 v1

Coverage vector

measured 16 of 16 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-06T17:25:50.383615Z

measured 16 of 16 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-10T06:31:04.303077+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

16 of 16 outbound references displayed

verified exact1
verified fuzzy9
unresolved6
parse uncertain0
malformed identifier0
metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 865db52e-1dca-4ccf-9090-7cfba59c3af9 · outbound

This paper cites P., Skwark, M.

Diffusion Decoding for Peptide De Novo Sequencing P., Skwark, M

Reference 1

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:25:52.400672Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation b6e0358a-3201-4125-a04e-e0ce773f902c · outbound

This paper cites Github copilot, 2025.

Diffusion Decoding for Peptide De Novo Sequencing Github copilot, 2025

Reference 2

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:25:52.264430Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 94f85748-0647-48ab-8fe6-65e9a20b325e · outbound

This paper cites Denoising diffusion probabilistic models.

Diffusion Decoding for Peptide De Novo Sequencing Denoising diffusion probabilistic models

Reference 3

Resolution: unresolved; no resolver link, observed 2026-08-06T17:25:49.361387Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation e1d65646-8c00-48e9-a805-386fd6a61e11 · outbound

This paper cites mgf - read and write ms/ms data in mascot generic format, 2020.

Diffusion Decoding for Peptide De Novo Sequencing mgf - read and write ms/ms data in mascot generic format, 2020

Reference 4

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:25:52.108472Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 109e20ba-92c6-4436-ab9e-fdf75de9fa89 · outbound

This paper cites S., and Hashimoto, T.

Diffusion Decoding for Peptide De Novo Sequencing S., and Hashimoto, T

Reference 5

Resolution: unresolved; no resolver link, observed 2026-08-06T17:25:49.500922Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 01027e57-22a2-437d-b69d-ade7092b66a3 · outbound

This paper cites Discrete Diffusion Modeling by Estimating the Ratios of the Data Distribution.

Diffusion Decoding for Peptide De Novo Sequencing Discrete Diffusion Modeling by Estimating the Ratios of the Data Distribution

Reference 6

Resolution: unresolved; no resolver link, observed 2026-08-06T17:25:49.545452Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 1f561820-66f8-4061-bb3f-bb1efef5ceac · outbound

This paper cites Mitigating the missing-fragmentation problem in de novo peptide sequencing with a two-stage graph-based deep learning model.

Diffusion Decoding for Peptide De Novo Sequencing Mitigating the missing-fragmentation problem in de novo peptide sequencing with a two-stage graph-based deep learning model

Reference 7

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:25:51.904600Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 6900425d-892f-4fad-874b-d49db4c25bdd · outbound

This paper cites and Noble, W.

Diffusion Decoding for Peptide De Novo Sequencing and Noble, W

Reference 8

Resolution: verified exact; raw_fallback, observed 2026-08-06T17:25:50.714205Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation e68fd7dc-89f9-419a-ad17-821cfd6f5ea5 · outbound

This paper cites E., Oh, S., and Noble, W.

Diffusion Decoding for Peptide De Novo Sequencing E., Oh, S., and Noble, W

Reference 9

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:25:51.691681Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation b508819f-689b-4ac0-8e8c-1a950bcab49c · outbound

This paper cites Evaluation metrics and statistical tests for machine learning.

Diffusion Decoding for Peptide De Novo Sequencing Evaluation metrics and statistical tests for machine learning

Reference 10

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:25:51.510040Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 41feb16a-7339-4cfb-915a-67c3b12fd53d · outbound

This paper cites Statistical functions (scipy.stats), 2025.

Diffusion Decoding for Peptide De Novo Sequencing Statistical functions (scipy.stats), 2025

Reference 11

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:25:51.344531Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 843e419a-edbb-49c4-8ae3-f6d2c04ce50f · outbound

This paper cites H., Zhang, X., Xin, L., Shan, B., and Li, M.

Diffusion Decoding for Peptide De Novo Sequencing H., Zhang, X., Xin, L., Shan, B., and Li, M

Reference 12

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:25:51.214554Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 2326a042-4c2e-44f2-a7fe-acd1fee440b0 · outbound

This paper cites S., Cha, S.

Diffusion Decoding for Peptide De Novo Sequencing S., Cha, S

Reference 13

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:25:51.069142Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 44fd9e54-7326-4594-9b35-d21476950e9c · outbound

This paper cites DINOISER: Diffused Conditional Sequence Learning by Manipulating Noises.

Diffusion Decoding for Peptide De Novo Sequencing DINOISER: Diffused Conditional Sequence Learning by Manipulating Noises

Reference 14

Resolution: unresolved; no resolver link, observed 2026-08-06T17:25:50.213099Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 414a6d2d-e019-4fa2-a37f-9776d038b266 · outbound

This paper cites an unresolved cited work.

Diffusion Decoding for Peptide De Novo Sequencing Unresolved cited work

Reference 15

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:25:50.899350Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation c57b1670-a418-4c09-90ad-7beb18ad251f · outbound

This paper cites write newline.

Diffusion Decoding for Peptide De Novo Sequencing write newline

Reference 16

Resolution: unresolved; no resolver link, observed 2026-08-06T17:25:50.383615Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Pith citing papers

No inbound Pith citation observations are available.