Paper Citation Record · LEDGER

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation

As of 13 August 2026, this Paper Citation Record lists 35 of 35 outbound references and 0 inbound Pith citation observations for arXiv:2607.00147.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2607.00147 v1

Coverage vector

measured 35 of 35 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-07-02T19:21:44.653877Z

measured 35 of 35 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-12T06:34:41.77262+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

35 of 35 outbound references displayed

verified exact11
verified fuzzy20
unresolved1
parse uncertain0
malformed identifier0
metadata mismatch3

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation d9fcc4c6-1333-4133-a720-8c915eff62e6 · outbound

This paper cites How many rare diseases are there?.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation How many rare diseases are there?

Reference 1

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.929617Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 654b61ec-8dc1-469f-9422-49b65329c0ba · outbound

This paper cites Retrospective on establishing rare diseases medical service system and research platform in china,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Retrospective on establishing rare diseases medical service system and research platform in china,

Reference 2

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.919449Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 3109453b-adce-4fbc-a9f3-161b539ccf5f · outbound

This paper cites Dare to think rare: diagnostic delay and rare diseases,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Dare to think rare: diagnostic delay and rare diseases,

Reference 3

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.897962Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation e299b6c0-8b7e-4f22-8aed-b75c9ba6b0e4 · outbound

This paper cites Epigenomic approaches for the diagnosis of rare diseases,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Epigenomic approaches for the diagnosis of rare diseases,

Reference 4

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.903774Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation e0cac267-692d-4654-86d4-196d79db0305 · outbound

This paper cites A phenotype-based ai pipeline outperforms human experts in differentially diagnosing rare diseases using ehrs,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation A phenotype-based ai pipeline outperforms human experts in differentially diagnosing rare diseases using ehrs,

Reference 5

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.923238Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation b0b2a959-9ac5-4a8f-a1e8-adaf652b47e0 · outbound

This paper cites Phen2disease: a phenotype- driven model for disease and gene prioritization by bidirectional max- imum matching semantic similarities,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Phen2disease: a phenotype- driven model for disease and gene prioritization by bidirectional max- imum matching semantic similarities,

Reference 6

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.933859Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation d02db9f0-9545-48e9-b163-8d4676406ffb · outbound

This paper cites Measuring phenotype semantic similarity using human phenotype ontology,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Measuring phenotype semantic similarity using human phenotype ontology,

Reference 7

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.905821Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 7552bebb-3164-4dc2-847f-ea1932f25dda · outbound

This paper cites Rare disease discovery: An optimized disease ranking system,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Rare disease discovery: An optimized disease ranking system,

Reference 8

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.921353Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 6166a55a-095d-4f33-a665-2a04574902eb · outbound

This paper cites Phen2gene: rapid phenotype-driven gene prioritization for rare dis- eases,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Phen2gene: rapid phenotype-driven gene prioritization for rare dis- eases,

Reference 9

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.917591Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 255b6fa8-9e04-49ee-8a02-fa70f050e61a · outbound

This paper cites Clinphen extracts and prioritizes patient phenotypes directly from medical records to expedite genetic disease diagnosis,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Clinphen extracts and prioritizes patient phenotypes directly from medical records to expedite genetic disease diagnosis,

Reference 10

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.907828Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 6215b7ea-f69f-48e2-942b-3a91238e8e7a · outbound

This paper cites Phenotype-driven strategies for exome prioritization of human mendelian disease genes,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Phenotype-driven strategies for exome prioritization of human mendelian disease genes,

Reference 11

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.931871Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 0a32dd11-ef7b-4842-8e11-e126b9b56d06 · outbound

This paper cites Baichuan-M1: Pushing the Medical Capability of Large Language Models.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Baichuan-M1: Pushing the Medical Capability of Large Language Models

Reference 12

Resolution: verified exact; arxiv_id, observed 2026-07-02T19:27:18.622200Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation bdb6cc59-5f05-4ecc-9bd5-f26a26cd5487 · outbound

This paper cites HuaTuo: Tuning LLaMA Model with Chinese Medical Knowledge.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation HuaTuo: Tuning LLaMA Model with Chinese Medical Knowledge

Reference 13

Resolution: metadata mismatch; arxiv_id, observed 2026-07-02T19:27:18.614427Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 852fcfbb-ceb8-4023-aeac-5d930de90f22 · outbound

This paper cites The human phenotype ontology in 2024: phenotypes around the world.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation The human phenotype ontology in 2024: phenotypes around the world

Reference 14

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.925564Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation d00d0bf6-cea4-4e9b-a33c-3982cd6bc1f0 · outbound

This paper cites Omim. org: Online mendelian inheritance in man (omim®), an online catalog of human genes and genetic disorders,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Omim. org: Online mendelian inheritance in man (omim®), an online catalog of human genes and genetic disorders,

Reference 15

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.910029Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 79576268-b5c5-43b6-a22f-1804ee8a6b97 · outbound

This paper cites Deepseek- r1 incentivizes reasoning in llms through reinforcement learning,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Deepseek- r1 incentivizes reasoning in llms through reinforcement learning,

Reference 16

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.896120Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 72bfb40e-2796-4899-b6da-38551046c6e7 · outbound

This paper cites Gemini pro,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Gemini pro,

Reference 17

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.901931Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 41734c81-27c9-49d2-87d2-1667ebe3f3bb · outbound

This paper cites Large Language Models for Mathematical Reasoning: Progresses and Challenges.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Large Language Models for Mathematical Reasoning: Progresses and Challenges

Reference 18

Resolution: verified exact; arxiv_id, observed 2026-07-02T19:27:18.591729Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 41353764-4539-4103-ae1c-8c6496027d39 · outbound

This paper cites Integrating Chain-of-Thought and Retrieval Augmented Generation Enhances Rare Disease Diagnosis from Clinical Notes.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Integrating Chain-of-Thought and Retrieval Augmented Generation Enhances Rare Disease Diagnosis from Clinical Notes

Reference 19

Resolution: verified exact; arxiv_id, observed 2026-07-15T01:20:45.155752Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation a4e82cf9-d795-4261-9154-381580debe34 · outbound

This paper cites https://arxiv.org/abs/2412.12475.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation https://arxiv.org/abs/2412.12475

Reference 20

Resolution: metadata mismatch; arxiv_id, observed 2026-07-02T19:27:18.596683Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation ffcc0b7e-1c00-458d-a107-a578b03733c3 · outbound

This paper cites et al.: An Agentic Sys- tem for Rare Disease Diagnosis with Traceable Reasoning (Aug 2025).

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation et al.: An Agentic Sys- tem for Rare Disease Diagnosis with Traceable Reasoning (Aug 2025)

Reference 21

Resolution: verified exact; arxiv_id, observed 2026-07-02T19:27:18.619624Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 1ae8a244-74a5-4cf5-928a-8c8495f5525b · outbound

This paper cites DeepSeekMath: Pushing the Limits of Mathematical Reasoning in Open Language Models.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation DeepSeekMath: Pushing the Limits of Mathematical Reasoning in Open Language Models

Reference 22

Resolution: verified exact; local_arxiv, observed 2026-07-02T19:27:18.606391Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 928c6d07-e6bf-497e-9ba3-baf1e047636e · outbound

This paper cites DAPO: An Open-Source LLM Reinforcement Learning System at Scale.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation DAPO: An Open-Source LLM Reinforcement Learning System at Scale

Reference 23

Resolution: verified exact; local_arxiv, observed 2026-07-02T19:27:18.609215Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 18fa81db-f6d3-413a-b6e1-1bd4eaba31f3 · outbound

This paper cites arXiv preprint arXiv:2503.13939 , year=.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation arXiv preprint arXiv:2503.13939 , year=

Reference 24

Resolution: metadata mismatch; arxiv_id, observed 2026-07-02T19:27:18.603758Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 05f53fe7-fe43-41b2-9806-d4c88f35f8ed · outbound

This paper cites Med-RLVR: Emerging Medical Reasoning from a 3B base model via reinforcement Learning.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Med-RLVR: Emerging Medical Reasoning from a 3B base model via reinforcement Learning

Reference 25

Resolution: verified exact; arxiv_id, observed 2026-07-02T19:27:18.599145Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 9106d5f1-ce0e-47b2-b9d5-c0a7d0c6b2ed · outbound

This paper cites Orphanet: a european database for rare diseases,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Orphanet: a european database for rare diseases,

Reference 26

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.912046Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation c4ce9eef-3d9e-497f-bf07-7a6899adbd25 · outbound

This paper cites an unresolved cited work.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Unresolved cited work

Reference 27

Resolution: unresolved; raw_fallback, observed 2026-07-05T21:21:25.899782Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation b6e0ec05-9717-4072-9282-56e80f68cc3e · outbound

This paper cites Pubmed: the bibliographic database,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Pubmed: the bibliographic database,

Reference 28

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.894054Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation b94e886d-9b6e-4468-b2c0-5a8f118d5b0f · outbound

This paper cites Rarearena,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Rarearena,

Reference 29

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.927566Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 9098b7af-7bca-4a02-9f5c-a9fe2918f28d · outbound

This paper cites Mimic-iv, a freely accessible electronic health record dataset,.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Mimic-iv, a freely accessible electronic health record dataset,

Reference 30

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.915826Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 88e2bbc5-3692-4034-8d38-2b5cee213325 · outbound

This paper cites Qwen3 Technical Report.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Qwen3 Technical Report

Reference 31

Resolution: verified exact; local_arxiv, observed 2026-07-02T19:27:18.616887Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation d98ffec1-12da-4a37-ab73-142cbea8de42 · outbound

This paper cites DiagnosisArena: Benchmarking Diagnostic Reasoning for Large Language Models.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation DiagnosisArena: Benchmarking Diagnostic Reasoning for Large Language Models

Reference 32

Resolution: verified exact; arxiv_id, observed 2026-07-02T19:27:18.624793Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 6804614b-9e9e-43d1-a997-4fc3c7605812 · outbound

This paper cites Rarebench: can llms serve as rare diseases specialists?.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation Rarebench: can llms serve as rare diseases specialists?

Reference 33

Resolution: verified fuzzy; raw_fallback, observed 2026-07-05T21:21:25.914011Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation eeb9df60-6c54-4695-877b-69e241ce84bf · outbound

This paper cites GPT-4 Technical Report.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation GPT-4 Technical Report

Reference 34

Resolution: verified exact; local_arxiv, observed 2026-07-02T19:27:18.611560Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation f35ef767-3602-4d89-86c2-fe7ae48158d9 · outbound

This paper cites HuatuoGPT-o1, Towards Medical Complex Reasoning with LLMs.

RareDxR1: Autonomous Medical Reasoning for Rare Disease Diagnosis Beyond Human Annotation HuatuoGPT-o1, Towards Medical Complex Reasoning with LLMs

Reference 35

Resolution: verified exact; local_arxiv, observed 2026-07-02T19:27:18.601376Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Pith citing papers

No inbound Pith citation observations are available.