Paper Citation Record · LEDGER

Latent Gene Diffusion for Spatial Transcriptomics Completion

As of 12 August 2026, this Paper Citation Record lists 31 of 31 outbound references and 0 inbound Pith citation observations for arXiv:2509.01864.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2509.01864 v1

Coverage vector

measured 31 of 31 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-05T12:11:51.094301Z

measured 31 of 31 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-12T06:34:41.77262+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

31 of 31 outbound references displayed

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verified fuzzy27
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External citation measurements

No source-named external measurement is stored.

Outbound references

Observation f55c4290-4a9f-47f6-bf6a-7d7f3db0e467 · outbound

This paper cites Spage: spatial gene enhancement using scrna-seq.

Latent Gene Diffusion for Spatial Transcriptomics Completion Spage: spatial gene enhancement using scrna-seq

Reference 1

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:56.257443Z

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Observation 1362a38f-194c-4fd5-889b-3d2cc04354f9 · outbound

This paper cites Autoencoders and their applications in machine learning: a survey.

Latent Gene Diffusion for Spatial Transcriptomics Completion Autoencoders and their applications in machine learning: a survey

Reference 2

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:56.040821Z

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Observation 1b1e927b-0944-4c14-b4f0-10112163c18b · outbound

This paper cites Deep learning and alignment of spatially resolved single-cell transcriptomes with tangram.

Latent Gene Diffusion for Spatial Transcriptomics Completion Deep learning and alignment of spatially resolved single-cell transcriptomes with tangram

Reference 3

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:55.862295Z

Source-reported events for the cited work

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Observation 42a72199-3828-4ed7-9b1d-a7633ab66557 · outbound

This paper cites Spatially resolved transcrip- tomics: a comprehensive review of their technological ad- vances, applications, and challenges.

Latent Gene Diffusion for Spatial Transcriptomics Completion Spatially resolved transcrip- tomics: a comprehensive review of their technological ad- vances, applications, and challenges

Reference 4

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:55.692573Z

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Observation 6f3667d7-2702-4b69-a53d-32a99c8bd0a0 · outbound

This paper cites A point cloud segmentation frame- work for image-based spatial transcriptomics.

Latent Gene Diffusion for Spatial Transcriptomics Completion A point cloud segmentation frame- work for image-based spatial transcriptomics

Reference 5

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Observation fe342113-3ae1-4657-aa89-0031f1904695 · outbound

This paper cites A practical guide to single-cell rna- sequencing for biomedical research and clinical applications.

Latent Gene Diffusion for Spatial Transcriptomics Completion A practical guide to single-cell rna- sequencing for biomedical research and clinical applications

Reference 6

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:55.261535Z

Source-reported events for the cited work

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Observation 0153481c-8cb4-492a-9a5b-de6dab3bc007 · outbound

This paper cites Integrating spatial gene expression and breast tumour morphology via deep learning.

Latent Gene Diffusion for Spatial Transcriptomics Completion Integrating spatial gene expression and breast tumour morphology via deep learning

Reference 7

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:55.048566Z

Source-reported events for the cited work

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Observation 0cb5de2e-5cbd-4d75-ba2e-99348426dab5 · outbound

This paper cites Denoising dif- fusion probabilistic models.

Latent Gene Diffusion for Spatial Transcriptomics Completion Denoising dif- fusion probabilistic models

Reference 8

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Source-reported events for the cited work

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Observation 8498519b-ed1f-4863-a40a-9b16649a1287 · outbound

This paper cites Advances in spatial transcriptomics and its applications in cancer re- search.

Latent Gene Diffusion for Spatial Transcriptomics Completion Advances in spatial transcriptomics and its applications in cancer re- search

Reference 9

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:54.775900Z

Source-reported events for the cited work

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Observation 03bb2db7-dc7a-40ad-b96b-46d09ad91ef7 · outbound

This paper cites Adam: A Method for Stochastic Optimization.

Latent Gene Diffusion for Spatial Transcriptomics Completion Adam: A Method for Stochastic Optimization

Reference 10

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Source-reported events for the cited work

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Observation 087f3c56-b0ec-41ab-9c75-0e5d32f8e360 · outbound

This paper cites Ma- chine learning methods for histopathological image analysis: Updates in 2024.

Latent Gene Diffusion for Spatial Transcriptomics Completion Ma- chine learning methods for histopathological image analysis: Updates in 2024

Reference 11

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:54.605953Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 66ac34e3-f567-4ab9-b488-cd35f5297f98 · outbound

This paper cites stdiff: a diffusion model for imputing spatial transcriptomics through single-cell transcriptomics.

Latent Gene Diffusion for Spatial Transcriptomics Completion stdiff: a diffusion model for imputing spatial transcriptomics through single-cell transcriptomics

Reference 12

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:54.394537Z

Source-reported events for the cited work

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Observation 5deebc3a-3dea-421c-a194-793ecc623c1e · outbound

This paper cites Emerging artificial intelligence applications in spatial transcriptomics analysis.

Latent Gene Diffusion for Spatial Transcriptomics Completion Emerging artificial intelligence applications in spatial transcriptomics analysis

Reference 13

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:54.231568Z

Source-reported events for the cited work

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Observation 181cc033-118d-46cb-8d2d-4ff3e6b12e91 · outbound

This paper cites scdiffusion: conditional generation of high-quality single- cell data using diffusion model.

Latent Gene Diffusion for Spatial Transcriptomics Completion scdiffusion: conditional generation of high-quality single- cell data using diffusion model

Reference 14

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:54.065474Z

Source-reported events for the cited work

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Observation b7e80765-dd4c-445c-aa88-df32ed897d19 · outbound

This paper cites Navigating the complexity of data imputation in spatial transcriptomics: Strategies, challenges, and future directions.

Latent Gene Diffusion for Spatial Transcriptomics Completion Navigating the complexity of data imputation in spatial transcriptomics: Strategies, challenges, and future directions

Reference 15

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:53.855480Z

Source-reported events for the cited work

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Observation 3992d093-e28e-485e-b821-9897a097adcb · outbound

This paper cites Method of the year: spatially resolved tran- scriptomics.

Latent Gene Diffusion for Spatial Transcriptomics Completion Method of the year: spatially resolved tran- scriptomics

Reference 16

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:53.660870Z

Source-reported events for the cited work

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Observation a3d68cd8-2781-4f8e-b6f3-11194e3e626d · outbound

This paper cites Sepal: Spatial gene expres- sion prediction from local graphs.

Latent Gene Diffusion for Spatial Transcriptomics Completion Sepal: Spatial gene expres- sion prediction from local graphs

Reference 17

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:53.482964Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 05f576f5-c979-47d5-8465-748a7ac95655 · outbound

This paper cites Enhancing gene expression prediction from histology images with spa- tial transcriptomics completion.

Latent Gene Diffusion for Spatial Transcriptomics Completion Enhancing gene expression prediction from histology images with spa- tial transcriptomics completion

Reference 18

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:53.241239Z

Source-reported events for the cited work

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Observation 04c63763-570b-4d01-a930-a377b7158225 · outbound

This paper cites Notes on continuous stochastic phenom- ena.

Latent Gene Diffusion for Spatial Transcriptomics Completion Notes on continuous stochastic phenom- ena

Reference 19

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:53.094428Z

Source-reported events for the cited work

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Observation 025e6899-d956-47f3-a5bc-b533ea5d69e2 · outbound

This paper cites Leverag- ing information in spatial transcriptomics to predict super- resolution gene expression from histology images in tumors.

Latent Gene Diffusion for Spatial Transcriptomics Completion Leverag- ing information in spatial transcriptomics to predict super- resolution gene expression from histology images in tumors

Reference 20

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:52.935059Z

Source-reported events for the cited work

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Observation fd05c95c-008d-4561-8ec0-2d13fa0ba494 · outbound

This paper cites Scalable diffusion models with transformers.

Latent Gene Diffusion for Spatial Transcriptomics Completion Scalable diffusion models with transformers

Reference 21

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Source-reported events for the cited work

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Observation 1800bf2b-a96f-475a-9f8e-f7b0d6e00d58 · outbound

This paper cites stlearn: integrating spatial location, tissue morphol- ogy and gene expression to find cell types, cell-cell inter- actions and spatial trajectories within undissociated tissues.

Latent Gene Diffusion for Spatial Transcriptomics Completion stlearn: integrating spatial location, tissue morphol- ogy and gene expression to find cell types, cell-cell inter- actions and spatial trajectories within undissociated tissues

Reference 22

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:52.685869Z

Source-reported events for the cited work

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Observation ee316b45-8469-4b81-8da6-c6353eb05498 · outbound

This paper cites High-resolution image synthesis with latent diffusion models.

Latent Gene Diffusion for Spatial Transcriptomics Completion High-resolution image synthesis with latent diffusion models

Reference 23

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:52.509275Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation ff1911f2-4876-4d16-a97c-55b914ceef68 · outbound

This paper cites stplus: a reference-based method for the accurate enhancement of spatial transcriptomics.

Latent Gene Diffusion for Spatial Transcriptomics Completion stplus: a reference-based method for the accurate enhancement of spatial transcriptomics

Reference 24

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:52.316605Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 740df976-fe35-4348-89b7-1aea3c225151 · outbound

This paper cites Structure-based protein and small molecule generation using egnn and diffusion models: A comprehensive review.

Latent Gene Diffusion for Spatial Transcriptomics Completion Structure-based protein and small molecule generation using egnn and diffusion models: A comprehensive review

Reference 25

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:52.170966Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 8526e066-1766-4827-bb0c-764f79553c4e · outbound

This paper cites Spatial transcriptomics: Technologies, applications and ex- perimental considerations.

Latent Gene Diffusion for Spatial Transcriptomics Completion Spatial transcriptomics: Technologies, applications and ex- perimental considerations

Reference 26

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:52.025589Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation f841de71-3a7b-414d-affa-7cc660d15036 · outbound

This paper cites Spatially resolved gene expression prediction from histology images via bi- modal contrastive learning.

Latent Gene Diffusion for Spatial Transcriptomics Completion Spatially resolved gene expression prediction from histology images via bi- modal contrastive learning

Reference 27

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:51.854486Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 35ce20f6-005e-4344-86b7-80ae6094c20d · outbound

This paper cites Integration tools for scrna-seq data and spatial transcriptomics sequencing data.

Latent Gene Diffusion for Spatial Transcriptomics Completion Integration tools for scrna-seq data and spatial transcriptomics sequencing data

Reference 28

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:51.633331Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation 5f320470-9556-44dc-b6b9-9d5e7ad48ee2 · outbound

This paper cites Exemplar guided deep neural network for spatial tran- scriptomics analysis of gene expression prediction.

Latent Gene Diffusion for Spatial Transcriptomics Completion Exemplar guided deep neural network for spatial tran- scriptomics analysis of gene expression prediction

Reference 29

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:51.456621Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation c594c88f-b592-4f65-8a49-386700936d55 · outbound

This paper cites Spatial transcriptomics analysis of gene expression pre- diction using exemplar guided graph neural network.Pattern Recognition, 145:109966, 2024.

Latent Gene Diffusion for Spatial Transcriptomics Completion Spatial transcriptomics analysis of gene expression pre- diction using exemplar guided graph neural network.Pattern Recognition, 145:109966, 2024

Reference 30

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:11:51.314208Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

Observation c87e7c81-ecde-466b-8e2d-f15bfd312fb8 · outbound

This paper cites Diffusion Generative Modeling for Spatially Resolved Gene Expression Inference from Histology Images.

Latent Gene Diffusion for Spatial Transcriptomics Completion Diffusion Generative Modeling for Spatially Resolved Gene Expression Inference from Histology Images

Reference 31

Resolution: unresolved; no resolver link, observed 2026-08-05T12:11:51.094301Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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