Paper Citation Record · LEDGER

Topological Sequence Analysis of Genomes: Delta Complex approaches

As of 10 August 2026, this Paper Citation Record lists 32 of 32 outbound references and 1 inbound Pith citation observation for arXiv:2507.05452.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2507.05452 v1

Coverage vector

measured 32 of 32 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-06T19:38:19.348224Z

measured 33 of 33 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-09T06:31:02.800959+00:00

measured 1 of 1 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-08-06T18:03:03.951944Z

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: pith, observed 2026-08-06T18:03:04.617339Z

Reference resolution

32 of 32 outbound references displayed

verified exact0
verified fuzzy29
unresolved3
parse uncertain0
malformed identifier0
metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 2eb08b10-5583-4194-adc4-a03a0f525dfa · outbound

This paper cites Quantum persistent homology.

Topological Sequence Analysis of Genomes: Delta Complex approaches Quantum persistent homology

Reference 1

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.570603Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation a5ae726a-59fb-4fcd-bf7c-4af600ddf433 · outbound

This paper cites Topologynet: Topology based deep convolutional and multi- task neural networks for biomolecular property predictions.

Topological Sequence Analysis of Genomes: Delta Complex approaches Topologynet: Topology based deep convolutional and multi- task neural networks for biomolecular property predictions

Reference 2

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.563894Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation f99a8aac-2eb6-48f5-9c26-3cf1799a9a80 · outbound

This paper cites Topology and data.

Topological Sequence Analysis of Genomes: Delta Complex approaches Topology and data

Reference 3

Resolution: unresolved; no resolver link, observed 2026-08-06T19:38:18.477506Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 63093282-cf12-4d30-9a5e-a90f10833db1 · outbound

This paper cites Topology of viral evolution.

Topological Sequence Analysis of Genomes: Delta Complex approaches Topology of viral evolution

Reference 4

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.552833Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 2b45055a-23a0-4aab-be8d-2019361220a8 · outbound

This paper cites Multiscale topology-enabled structure-to-sequence transformer for protein–ligand interaction predictions.

Topological Sequence Analysis of Genomes: Delta Complex approaches Multiscale topology-enabled structure-to-sequence transformer for protein–ligand interaction predictions

Reference 5

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.546720Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 53ef0b77-52b3-4863-8fb9-7cafd35efaf8 · outbound

This paper cites Path topology in molecular and materials sciences.

Topological Sequence Analysis of Genomes: Delta Complex approaches Path topology in molecular and materials sciences

Reference 6

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.540359Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 223ca3c9-177d-4771-b8fb-571f9064fc76 · outbound

This paper cites Evolutionary de Rham-Hodge method.

Topological Sequence Analysis of Genomes: Delta Complex approaches Evolutionary de Rham-Hodge method

Reference 7

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.533416Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation fe6910aa-fa64-409e-8170-5eac2b570317 · outbound

This paper cites Persistent path homology of directed networks.

Topological Sequence Analysis of Genomes: Delta Complex approaches Persistent path homology of directed networks

Reference 8

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.526956Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 4eab0d37-1bb0-4009-b18e-560f362be9b0 · outbound

This paper cites A novel method of characterizing genetic sequences: genome space with biological distance and applications.

Topological Sequence Analysis of Genomes: Delta Complex approaches A novel method of characterizing genetic sequences: genome space with biological distance and applications

Reference 9

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.520741Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 074bc6ce-1b85-4dd0-b6ba-c06fb67bf539 · outbound

This paper cites Combinatorial topological models for phylogenetic networks and the mergegram invariant.

Topological Sequence Analysis of Genomes: Delta Complex approaches Combinatorial topological models for phylogenetic networks and the mergegram invariant

Reference 10

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.514041Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation fb9a415d-18c6-4b25-888d-e1df19b7068b · outbound

This paper cites Persistent homology-a survey.

Topological Sequence Analysis of Genomes: Delta Complex approaches Persistent homology-a survey

Reference 11

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.507614Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 430b909c-32b0-43a1-95bc-640962a66e76 · outbound

This paper cites Homologies of path complexes and digraphs.

Topological Sequence Analysis of Genomes: Delta Complex approaches Homologies of path complexes and digraphs

Reference 12

Resolution: unresolved; no resolver link, observed 2026-08-06T19:38:19.300374Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 208b3bd8-4d29-4ecd-8259-14e18d37992c · outbound

This paper cites Cohomology of digraphs and (undirected) graphs.

Topological Sequence Analysis of Genomes: Delta Complex approaches Cohomology of digraphs and (undirected) graphs

Reference 13

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.501315Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation bfc48f02-fc83-4c63-8334-179c72546805 · outbound

This paper cites A new method to cluster dna sequences using fourier power spectrum.

Topological Sequence Analysis of Genomes: Delta Complex approaches A new method to cluster dna sequences using fourier power spectrum

Reference 14

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.495224Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation ab1e4e58-2e23-402b-935a-617b12dd81a0 · outbound

This paper cites Revealing the Shape of Genome Space via K-mer Topology.

Topological Sequence Analysis of Genomes: Delta Complex approaches Revealing the Shape of Genome Space via K-mer Topology

Reference 15

Resolution: unresolved; no resolver link, observed 2026-08-06T19:38:19.308056Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 471223ec-e3ec-4fd2-b0de-b57a36e7d2b4 · outbound

This paper cites Whole-proteome phylogeny of prokaryotes by feature frequency profiles: An alignment-free method with optimal feature resolution.

Topological Sequence Analysis of Genomes: Delta Complex approaches Whole-proteome phylogeny of prokaryotes by feature frequency profiles: An alignment-free method with optimal feature resolution

Reference 16

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.489317Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation d74b0404-167a-4b25-a5a8-a9308182d1bb · outbound

This paper cites Persistent interaction topology in data analysis.

Topological Sequence Analysis of Genomes: Delta Complex approaches Persistent interaction topology in data analysis

Reference 17

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.482850Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 9d3f6996-0ed8-4ade-b28a-01b2f3fbebd1 · outbound

This paper cites The algebraic stability for persistent Laplacians.

Topological Sequence Analysis of Genomes: Delta Complex approaches The algebraic stability for persistent Laplacians

Reference 18

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.476651Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 4cc0a385-3613-4ea4-a5e2-b334e57e8493 · outbound

This paper cites Persistent laplacians: Properties, algo- rithms and implications.

Topological Sequence Analysis of Genomes: Delta Complex approaches Persistent laplacians: Properties, algo- rithms and implications

Reference 19

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.470142Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 3747dcd8-e0b0-4f2a-81bf-266a786088a5 · outbound

This paper cites A topological characterization of dna sequences based on chaos geometry and persistent homology.

Topological Sequence Analysis of Genomes: Delta Complex approaches A topological characterization of dna sequences based on chaos geometry and persistent homology

Reference 20

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.463578Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation ddc23885-76ab-440e-9145-a43f884a4219 · outbound

This paper cites Position: Topo- logical deep learning is the new frontier for relational learning.

Topological Sequence Analysis of Genomes: Delta Complex approaches Position: Topo- logical deep learning is the new frontier for relational learning

Reference 21

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.457491Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation f1249b6f-2ddb-4e2b-856e-0ab169995c5a · outbound

This paper cites Persistent-homology-based machine learning: a survey and a comparative study.

Topological Sequence Analysis of Genomes: Delta Complex approaches Persistent-homology-based machine learning: a survey and a comparative study

Reference 22

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.450950Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 30ee67d8-da8c-4d8a-a5e5-3b055869e412 · outbound

This paper cites Whole proteome prokaryote phylogeny without sequence alignment: Ak-string composition approach.

Topological Sequence Analysis of Genomes: Delta Complex approaches Whole proteome prokaryote phylogeny without sequence alignment: Ak-string composition approach

Reference 23

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.444504Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 47b1154d-2803-47bb-947c-e44814ede696 · outbound

This paper cites Alignment-free genome comparison with feature frequency profiles (ffp) and optimal resolutions.

Topological Sequence Analysis of Genomes: Delta Complex approaches Alignment-free genome comparison with feature frequency profiles (ffp) and optimal resolutions

Reference 24

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.438390Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation e187f240-18bc-41a2-9c4a-ad2f78d35098 · outbound

This paper cites Revealing hidden medium-range order in amorphous materials using topological data analysis.

Topological Sequence Analysis of Genomes: Delta Complex approaches Revealing hidden medium-range order in amorphous materials using topological data analysis

Reference 25

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.432221Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation cec45f21-ae28-4505-aff3-936a692eaa27 · outbound

This paper cites Persistent dirac of paths on digraphs and hypergraphs.

Topological Sequence Analysis of Genomes: Delta Complex approaches Persistent dirac of paths on digraphs and hypergraphs

Reference 26

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.425700Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation e850de89-ee08-45f5-83f1-96bc87f508c3 · outbound

This paper cites Alignment-free sequence comparison—a review.

Topological Sequence Analysis of Genomes: Delta Complex approaches Alignment-free sequence comparison—a review

Reference 27

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.418792Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation be96175e-bbaa-40d3-97be-0dbe39e068ed · outbound

This paper cites Mutations on covid-19 diag- nostic targets.

Topological Sequence Analysis of Genomes: Delta Complex approaches Mutations on covid-19 diag- nostic targets

Reference 28

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.411321Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 94670f42-8cec-4521-b89e-dadd7bb5f4ed · outbound

This paper cites Persistent spectral graph.

Topological Sequence Analysis of Genomes: Delta Complex approaches Persistent spectral graph

Reference 29

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.404727Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 46ee35fb-6988-4a9c-ab6c-38dc43a0b52d · outbound

This paper cites Persistent path laplacian.

Topological Sequence Analysis of Genomes: Delta Complex approaches Persistent path laplacian

Reference 30

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.397846Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation bc881b98-7ab9-4554-af6f-6290e57e90d8 · outbound

This paper cites Persistent dirac for molecular representation.

Topological Sequence Analysis of Genomes: Delta Complex approaches Persistent dirac for molecular representation

Reference 31

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.391220Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 59e05690-f18e-4f7b-a94a-f21eea093ed1 · outbound

This paper cites Real time classification of viruses in 12 dimensions.

Topological Sequence Analysis of Genomes: Delta Complex approaches Real time classification of viruses in 12 dimensions

Reference 32

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T19:38:19.383495Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Pith citing papers

Observation fc5c94e6-1ac5-41a9-a384-df63408a2cd4 · inbound

Topological Data Analysis and Topological Deep Learning Beyond Persistent Homology -- A Review cites this paper.

Topological Data Analysis and Topological Deep Learning Beyond Persistent Homology -- A Review Topological Sequence Analysis of Genomes: Delta Complex approaches

Reference 198

Resolution: metadata mismatch; local_arxiv, observed 2026-08-06T18:03:04.621694Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.