Recognizing and generating knotted molecular structures by machine learning | Paper Citation Record

Observation c6e08e60-0524-4f8b-9312-f2f87eaf824b · outbound

This paper cites merlin.mbs aapmrev4-1.bst 2010-07-25 4.21a (PWD, AO, DPC) hacked.

Recognizing and generating knotted molecular structures by machine learning merlin.mbs aapmrev4-1.bst 2010-07-25 4.21a (PWD, AO, DPC) hacked

Reference 1

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This paper cites merlin.mbs aipauth4-1.bst 2010-07-25 4.21a (PWD, AO, DPC) hacked.

Recognizing and generating knotted molecular structures by machine learning merlin.mbs aipauth4-1.bst 2010-07-25 4.21a (PWD, AO, DPC) hacked

Reference 2

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This paper cites merlin.mbs aipnum4-1.bst 2010-07-25 4.21a (PWD, AO, DPC) hacked.

Recognizing and generating knotted molecular structures by machine learning merlin.mbs aipnum4-1.bst 2010-07-25 4.21a (PWD, AO, DPC) hacked

Reference 3

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Observation e8f48c78-43d0-4811-a3bc-938851e9a9e9 · outbound

This paper cites merlin.mbs apsrev4-1.bst 2010-07-25 4.21a (PWD, AO, DPC) hacked.

Recognizing and generating knotted molecular structures by machine learning merlin.mbs apsrev4-1.bst 2010-07-25 4.21a (PWD, AO, DPC) hacked

Reference 4

Resolution: unresolved; no resolver link, observed 2026-08-10T16:53:47.258018Z

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Observation 780d6adc-5f64-4109-95bd-19ac5418ee7f · outbound

This paper cites merlin.mbs apsrmp4-1.bst 2010-07-25 4.21a (PWD, AO, DPC) hacked.

Recognizing and generating knotted molecular structures by machine learning merlin.mbs apsrmp4-1.bst 2010-07-25 4.21a (PWD, AO, DPC) hacked

Reference 5

Resolution: unresolved; no resolver link, observed 2026-08-10T16:53:47.264628Z

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Observation a4267368-66fe-44c2-9be5-891bb4f96da1 · outbound

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Recognizing and generating knotted molecular structures by machine learning Unresolved cited work

Reference 6

Resolution: unresolved; raw_fallback, observed 2026-08-10T16:53:48.835012Z

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Observation b7c0b3db-b69b-44ed-a318-33fb8a349b6b · outbound

This paper cites an unresolved cited work.

Recognizing and generating knotted molecular structures by machine learning Unresolved cited work

Reference 7

Resolution: unresolved; raw_fallback, observed 2026-08-10T16:53:48.818881Z

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Observation f9b54bb4-e209-4b29-966a-36c9388388ca · outbound

This paper cites Simplification of dna topology below equilibrium values by type ii topoisomerases.

Recognizing and generating knotted molecular structures by machine learning Simplification of dna topology below equilibrium values by type ii topoisomerases

Reference 8

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.803184Z

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Observation f2acc035-24fd-4679-9738-ffc5d0def447 · outbound

This paper cites Knotting probability of dna molecules confined in restricted volumes: Dna knotting in phage capsids.

Recognizing and generating knotted molecular structures by machine learning Knotting probability of dna molecules confined in restricted volumes: Dna knotting in phage capsids

Reference 9

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.786621Z

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Observation 4680482a-e6a9-4d92-a8c9-d4c5123b28fa · outbound

This paper cites Direct observation of dna knots using a solid-state nanopore.

Recognizing and generating knotted molecular structures by machine learning Direct observation of dna knots using a solid-state nanopore

Reference 10

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.771321Z

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Observation 8f3fbc22-3b4a-474e-a38a-c381d2588cbb · outbound

This paper cites A deeply knotted protein structure and how it might fold.

Recognizing and generating knotted molecular structures by machine learning A deeply knotted protein structure and how it might fold

Reference 11

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.755935Z

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Observation 80b3a694-fb89-4b8b-a9f7-cc6f8798c854 · outbound

This paper cites Knot formation in newly translated proteins is spontaneous and accelerated by chaperonins.

Recognizing and generating knotted molecular structures by machine learning Knot formation in newly translated proteins is spontaneous and accelerated by chaperonins

Reference 12

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.740696Z

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Observation 09f6b246-1730-4a05-ad75-92424d6fe84b · outbound

This paper cites Knots can impair protein degradation by atp\-dependent proteases.

Recognizing and generating knotted molecular structures by machine learning Knots can impair protein degradation by atp\-dependent proteases

Reference 13

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.725452Z

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Observation 21b00858-ccab-4791-ba22-a3f6c2191a52 · outbound

This paper cites Alphaknot 2.0: a web server for the visualization of proteins’ knotting and a database of knotted alphafold-predicted models.

Recognizing and generating knotted molecular structures by machine learning Alphaknot 2.0: a web server for the visualization of proteins’ knotting and a database of knotted alphafold-predicted models

Reference 14

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.710220Z

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Observation 9045db1e-6221-473a-86c9-d4854abbc1b9 · outbound

This paper cites Formation of knots in partially replicated dna molecules.

Recognizing and generating knotted molecular structures by machine learning Formation of knots in partially replicated dna molecules

Reference 15

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.694107Z

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Observation e0112c1e-ca79-461d-8245-f446233e8d4a · outbound

This paper cites The why and how of dna unlinking.

Recognizing and generating knotted molecular structures by machine learning The why and how of dna unlinking

Reference 16

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.678733Z

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Observation de6bf4e4-88e0-48de-bd45-a163687ab849 · outbound

This paper cites Topological friction strongly affects viral dna ejection.

Recognizing and generating knotted molecular structures by machine learning Topological friction strongly affects viral dna ejection

Reference 17

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.662864Z

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Observation ed6f172e-bc56-48da-986c-9aa7fbcbe012 · outbound

This paper cites Disentangling dna molecules.

Recognizing and generating knotted molecular structures by machine learning Disentangling dna molecules

Reference 18

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.648208Z

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Observation d237ece3-7be5-4d50-a854-e910e016b30f · outbound

This paper cites Closing the dna replication cycle: from simple circular molecules to supercoiled and knotted dna catenanes.

Recognizing and generating knotted molecular structures by machine learning Closing the dna replication cycle: from simple circular molecules to supercoiled and knotted dna catenanes

Reference 19

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.633819Z

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Observation 484e5d47-8c70-4fe2-825e-f8f4a3a8152b · outbound

This paper cites Structure and mechanism of dna topoisomerase ii.

Recognizing and generating knotted molecular structures by machine learning Structure and mechanism of dna topoisomerase ii

Reference 20

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.618579Z

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Observation f43bfed0-c1c6-4c51-96b1-3e671fefa250 · outbound

This paper cites Targeting dna topoisomerase ii in cancer chemotherapy.

Recognizing and generating knotted molecular structures by machine learning Targeting dna topoisomerase ii in cancer chemotherapy

Reference 21

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.603417Z

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Observation 2c7bda76-d445-495e-8679-719afd3d8131 · outbound

This paper cites Knotprot: a database of proteins with knots and slipknots.

Recognizing and generating knotted molecular structures by machine learning Knotprot: a database of proteins with knots and slipknots

Reference 22

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.586232Z

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No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 04964e91-0e93-4cfb-aa98-93a6b7735b35 · outbound

This paper cites Stabilizing effect of knots on proteins.

Recognizing and generating knotted molecular structures by machine learning Stabilizing effect of knots on proteins

Reference 23

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.569323Z

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Observation cca98793-45b6-4c56-9876-903b5a61de77 · outbound

This paper cites Computational design of extraordinarily stable peptide structures through side-chain-locked knots.

Recognizing and generating knotted molecular structures by machine learning Computational design of extraordinarily stable peptide structures through side-chain-locked knots

Reference 24

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.549989Z

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Observation 0790f150-c9a7-41c5-be7b-4b636b5d9ae9 · outbound

This paper cites Methyl transfer by substrate signaling from a knotted protein fold.

Recognizing and generating knotted molecular structures by machine learning Methyl transfer by substrate signaling from a knotted protein fold

Reference 25

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.532161Z

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Observation 7276694d-b053-4dab-ab10-8e7c31146b8c · outbound

This paper cites Allosteric initiation and regulation of catalysis with a molecular knot.

Recognizing and generating knotted molecular structures by machine learning Allosteric initiation and regulation of catalysis with a molecular knot

Reference 26

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.515786Z

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Observation 20f181a5-2ac5-4092-b1d9-314d01ae40fc · outbound

This paper cites Compression and self-entanglement of single dna molecules under uniform electric field.

Recognizing and generating knotted molecular structures by machine learning Compression and self-entanglement of single dna molecules under uniform electric field

Reference 27

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.499354Z

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Observation b801817b-2c95-45eb-89fd-af647eb6dc1e · outbound

This paper cites Stretching self-entangled dna molecules in elongational fields.

Recognizing and generating knotted molecular structures by machine learning Stretching self-entangled dna molecules in elongational fields

Reference 28

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.482017Z

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Observation fd921bc4-ac66-4f49-a03c-9d03a537016d · outbound

This paper cites Mechanical scission of a knotted polymer.

Recognizing and generating knotted molecular structures by machine learning Mechanical scission of a knotted polymer

Reference 29

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.466399Z

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Observation 1a4b1ddd-c857-41d9-b559-64d9ab5c842d · outbound

This paper cites Sequence controlled self-knotting colloidal patchy polymers.

Recognizing and generating knotted molecular structures by machine learning Sequence controlled self-knotting colloidal patchy polymers

Reference 30

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.449884Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 92fad6f2-b5a0-4ba2-8775-ef31fef8ed5c · outbound

This paper cites Dna knot malleability in single-digit nanopores.

Recognizing and generating knotted molecular structures by machine learning Dna knot malleability in single-digit nanopores

Reference 31

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.432979Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation e7af3255-c7d1-4480-8b6f-4cce83beba13 · outbound

This paper cites Complex dna knots detected with a nanopore sensor.

Recognizing and generating knotted molecular structures by machine learning Complex dna knots detected with a nanopore sensor

Reference 32

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.417590Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 2b3bcae8-e1cf-43c2-a4ef-f7b19660c802 · outbound

This paper cites Pore translocation of knotted dna rings.

Recognizing and generating knotted molecular structures by machine learning Pore translocation of knotted dna rings

Reference 33

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.402196Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation e2cfd8d8-2545-458f-9260-2cebaf23b424 · outbound

This paper cites Topological events in single molecules of e.

Recognizing and generating knotted molecular structures by machine learning Topological events in single molecules of e

Reference 34

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.386988Z

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No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 60713105-c406-4c97-98bb-d603f3bc750b · outbound

This paper cites Dynamics of double-knotted dna molecules under nanochannel confinement.

Recognizing and generating knotted molecular structures by machine learning Dynamics of double-knotted dna molecules under nanochannel confinement

Reference 35

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.370855Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 4d916707-f205-4a46-b20b-fee110603c96 · outbound

This paper cites Diffusion of knotted dna molecules in nanochannels in the extended de gennes regime.

Recognizing and generating knotted molecular structures by machine learning Diffusion of knotted dna molecules in nanochannels in the extended de gennes regime

Reference 36

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.352912Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation dededbe3-b007-47f9-bec7-151f18b6ba87 · outbound

This paper cites Topological invariants of knots and links.

Recognizing and generating knotted molecular structures by machine learning Topological invariants of knots and links

Reference 37

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.336263Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 317add5e-31c0-4eb9-b749-72ae8b8099c9 · outbound

This paper cites Hecke algebra representations of braid groups and link polynomials , pages 20--73.

Recognizing and generating knotted molecular structures by machine learning Hecke algebra representations of braid groups and link polynomials , pages 20--73

Reference 38

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.318961Z

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No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 5e95efa2-9ac1-48d8-b852-f946df141d2c · outbound

This paper cites A new polynomial invariant of knots and links.

Recognizing and generating knotted molecular structures by machine learning A new polynomial invariant of knots and links

Reference 39

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.301570Z

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No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 0af9a6c2-ebe3-4422-b3a1-11b02809ec1a · outbound

This paper cites Holomorphic disks and knot invariants.

Recognizing and generating knotted molecular structures by machine learning Holomorphic disks and knot invariants

Reference 40

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.285270Z

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Observation 945b6470-6e06-4004-9005-634a03ae7b1c · outbound

This paper cites A categorification of the jones polynomial.

Recognizing and generating knotted molecular structures by machine learning A categorification of the jones polynomial

Reference 41

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.268015Z

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Observation 7c5f8dc0-f8f2-4334-9ee7-c1a39a317810 · outbound

This paper cites Long short-term memory.

Recognizing and generating knotted molecular structures by machine learning Long short-term memory

Reference 42

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.251919Z

Source-reported events for the cited work

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Observation 487bdbe3-cd64-4473-b756-8b30e8403341 · outbound

This paper cites Identifying knot types of polymer conformations by machine learning.

Recognizing and generating knotted molecular structures by machine learning Identifying knot types of polymer conformations by machine learning

Reference 43

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.236587Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation afd88945-7a9b-4197-962d-7c13509a9bc8 · outbound

This paper cites Machine learning understands knotted polymers.

Recognizing and generating knotted molecular structures by machine learning Machine learning understands knotted polymers

Reference 44

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.221441Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 116ccdcc-abf7-4d70-b5d8-60bd9270a363 · outbound

This paper cites Knot or not? identifying unknotted proteins in knotted families with sequence‐based machine learning model.

Recognizing and generating knotted molecular structures by machine learning Knot or not? identifying unknotted proteins in knotted families with sequence‐based machine learning model

Reference 45

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.206026Z

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No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 7b0002a7-fb56-4bd3-99ca-5f331f509c19 · outbound

This paper cites Geometric learning of knot topology.

Recognizing and generating knotted molecular structures by machine learning Geometric learning of knot topology

Reference 46

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.189247Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 69708f6f-abae-42aa-8b64-3bd2c9d34ff6 · outbound

This paper cites Integrating graph convolutional network to bilstm for enhanced polymer knot identification.

Recognizing and generating knotted molecular structures by machine learning Integrating graph convolutional network to bilstm for enhanced polymer knot identification

Reference 47

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.171551Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 6051072a-b764-45fc-9ec0-f2d42634ed9a · outbound

This paper cites Spontaneous knotting and unknotting of flexible linear polymers: Equilibrium and kinetic aspects.

Recognizing and generating knotted molecular structures by machine learning Spontaneous knotting and unknotting of flexible linear polymers: Equilibrium and kinetic aspects

Reference 48

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.155151Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation fbdd7f52-c8f2-461b-b09f-e88109a76822 · outbound

This paper cites Statics and dynamics of dna knotting.

Recognizing and generating knotted molecular structures by machine learning Statics and dynamics of dna knotting

Reference 49

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.138505Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation b6a8aee5-448b-4a40-934e-af2b85b26c13 · outbound

This paper cites Tube model for polymer knots with excluded volume interactions and its applications.

Recognizing and generating knotted molecular structures by machine learning Tube model for polymer knots with excluded volume interactions and its applications

Reference 50

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.122127Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation b7e5094e-5182-406f-a41b-d87c3c6e6516 · outbound

This paper cites Bengio, P.

Recognizing and generating knotted molecular structures by machine learning Bengio, P

Reference 51

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.105351Z

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No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 76396dba-102c-40bd-94eb-bd2f46aaebd3 · outbound

This paper cites Attention is all you need.

Recognizing and generating knotted molecular structures by machine learning Attention is all you need

Reference 52

Resolution: unresolved; no resolver link, observed 2026-08-10T16:53:47.494997Z

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Observation 8502236e-0ee2-4bc1-aab5-a4e7332b78e3 · outbound

This paper cites An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale.

Recognizing and generating knotted molecular structures by machine learning An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale

Reference 53

Resolution: unresolved; no resolver link, observed 2026-08-10T16:53:47.499913Z

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This paper cites Improving language understanding by generative pre-training.

Recognizing and generating knotted molecular structures by machine learning Improving language understanding by generative pre-training

Reference 54

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This paper cites Language models are few-shot learners.

Recognizing and generating knotted molecular structures by machine learning Language models are few-shot learners

Reference 55

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.066941Z

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Observation 38c9c674-da20-4e9b-b180-192d9835bf2f · outbound

This paper cites Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem.

Recognizing and generating knotted molecular structures by machine learning Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem

Reference 56

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Recognizing and generating knotted molecular structures by machine learning Unresolved cited work

Reference 57

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Observation c0485b38-d6dd-4895-958b-cf8d57180753 · outbound

This paper cites Machine learning for functional protein design.

Recognizing and generating knotted molecular structures by machine learning Machine learning for functional protein design

Reference 58

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Observation 460291b5-5815-4330-9b48-26a4d1c216b1 · outbound

This paper cites Deepcg: Constructing coarse-grained models via deep neural networks.

Recognizing and generating knotted molecular structures by machine learning Deepcg: Constructing coarse-grained models via deep neural networks

Reference 59

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:48.016431Z

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Observation 0275b567-1394-4901-a8f1-6c3ebc12cb41 · outbound

This paper cites Boltzmann generators: Sampling equilibrium states of many-body systems with deep learning.

Recognizing and generating knotted molecular structures by machine learning Boltzmann generators: Sampling equilibrium states of many-body systems with deep learning

Reference 60

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This paper cites Two for one: Diffusion models and force fields for coarse-grained molecular dynamics.

Recognizing and generating knotted molecular structures by machine learning Two for one: Diffusion models and force fields for coarse-grained molecular dynamics

Reference 61

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.985577Z

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Observation d8421ca1-bad4-40eb-bc00-4a749f2eec61 · outbound

This paper cites Score dynamics: Scaling molecular dynamics with picoseconds time steps via conditional diffusion model.

Recognizing and generating knotted molecular structures by machine learning Score dynamics: Scaling molecular dynamics with picoseconds time steps via conditional diffusion model

Reference 62

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.969706Z

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Observation 10b68e37-cd57-4129-973d-c75139330824 · outbound

This paper cites Virnau, L.

Recognizing and generating knotted molecular structures by machine learning Virnau, L

Reference 63

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.952507Z

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Observation 9c983990-ab9d-4d08-a8d9-52d47087438a · outbound

This paper cites Protein knot server: detection of knots in protein structures.

Recognizing and generating knotted molecular structures by machine learning Protein knot server: detection of knots in protein structures

Reference 64

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.937477Z

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Observation bebd7e42-2bf0-473e-bdc1-903e17aa11d3 · outbound

This paper cites The knotted protein uch-l1 exhibits partially unfolded forms under native conditions that share common structural features with its kinetic folding intermediates.

Recognizing and generating knotted molecular structures by machine learning The knotted protein uch-l1 exhibits partially unfolded forms under native conditions that share common structural features with its kinetic folding intermediates

Reference 65

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.921791Z

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Observation 6c4f6dd7-7122-47cd-a1c0-4fc0a78c1a16 · outbound

This paper cites Probing the entanglement and locating knots in ring polymers: a comparative study of different arc closure schemes.

Recognizing and generating knotted molecular structures by machine learning Probing the entanglement and locating knots in ring polymers: a comparative study of different arc closure schemes

Reference 66

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.904586Z

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Observation 83dcd14b-32ca-468a-96ef-57ef8d48d434 · outbound

This paper cites Alphaknot 2.0: a web server for the visualization of proteins’ knotting and a database of knotted alphafold-predicted models.

Recognizing and generating knotted molecular structures by machine learning Alphaknot 2.0: a web server for the visualization of proteins’ knotting and a database of knotted alphafold-predicted models

Reference 67

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.886457Z

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Observation deaf35dc-a879-4109-b2cd-57d0b5777e58 · outbound

This paper cites Diffusion models beat gans on image synthesis.

Recognizing and generating knotted molecular structures by machine learning Diffusion models beat gans on image synthesis

Reference 68

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Observation 3eaca05e-f5dd-475c-ba96-d8398f98a9b1 · outbound

This paper cites Classifier-Free Diffusion Guidance.

Recognizing and generating knotted molecular structures by machine learning Classifier-Free Diffusion Guidance

Reference 69

Resolution: unresolved; no resolver link, observed 2026-08-10T16:53:47.572766Z

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Observation 437c8ae7-8087-4932-9760-c4cc86720e76 · outbound

This paper cites Metastable tight knots in semiflexible chains.

Recognizing and generating knotted molecular structures by machine learning Metastable tight knots in semiflexible chains

Reference 70

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.857844Z

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Observation 35defdde-0896-402c-9670-3a403a03b36b · outbound

This paper cites Polymers with spatial or topological constraints: Theoretical and computational results.

Recognizing and generating knotted molecular structures by machine learning Polymers with spatial or topological constraints: Theoretical and computational results

Reference 71

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.841144Z

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Observation f2b764e4-0079-492a-93e8-2dfc4cf3fbd4 · outbound

This paper cites Knotting in flexible-semiflexible block copolymers.

Recognizing and generating knotted molecular structures by machine learning Knotting in flexible-semiflexible block copolymers

Reference 72

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.825815Z

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No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 98416291-b604-44eb-8c3e-6824b1ac65cb · outbound

This paper cites Revisiting the non-monotonic dependence of polymer knotting probability on the bending stiffness.

Recognizing and generating knotted molecular structures by machine learning Revisiting the non-monotonic dependence of polymer knotting probability on the bending stiffness

Reference 73

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.809006Z

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Observation 95b9b81f-7253-4033-b8ac-ad0debf86311 · outbound

This paper cites Zhang, D.

Recognizing and generating knotted molecular structures by machine learning Zhang, D

Reference 74

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.791313Z

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Observation d7f346df-88f8-4402-8335-a8e51f567e19 · outbound

This paper cites Learning transferable visual models from natural language supervision.

Recognizing and generating knotted molecular structures by machine learning Learning transferable visual models from natural language supervision

Reference 75

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.775031Z

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Observation eed68efa-bf5e-4f1f-b306-5a949afab6d7 · outbound

This paper cites Advancing mathematics by guiding human intuition with ai.

Recognizing and generating knotted molecular structures by machine learning Advancing mathematics by guiding human intuition with ai

Reference 76

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.758010Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 3756a55f-8482-495d-965e-6cc97c6f521f · outbound

This paper cites Dynamics of entangled linear polymer melts: A molecular-dynamics simulation.

Recognizing and generating knotted molecular structures by machine learning Dynamics of entangled linear polymer melts: A molecular-dynamics simulation

Reference 77

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.741520Z

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No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 8b7251bf-ed9c-4a4b-b0c9-ab48d7c27f3a · outbound

This paper cites Fourier features let networks learn high frequency functions in low dimensional domains.

Recognizing and generating knotted molecular structures by machine learning Fourier features let networks learn high frequency functions in low dimensional domains

Reference 78

Resolution: verified fuzzy; raw_fallback, observed 2026-08-10T16:53:47.724496Z

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No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 0d5c2967-93df-4904-9462-bd44f924d18f · outbound

This paper cites Understanding and improving layer normalization.

Recognizing and generating knotted molecular structures by machine learning Understanding and improving layer normalization

Reference 79

Resolution: unresolved; no resolver link, observed 2026-08-10T16:53:47.621392Z

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