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Paper Citation Record · LEDGER

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning

As of 13 August 2026, this Paper Citation Record lists 65 of 65 outbound references and 1 inbound Pith citation observation for arXiv:2412.19422.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2412.19422 v2

Coverage vector

measured 65 of 65 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-11T00:42:08.365679Z

measured 66 of 66 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-12T06:34:41.77262+00:00

measured 1 of 1 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-08-06T17:46:50.670273Z

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: pith, observed 2026-08-06T17:46:52.881151Z

Reference resolution

65 of 65 outbound references displayed

  • verified exact2
  • verified fuzzy57
  • unresolved6
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External citation measurements

No source-named external measurement is stored.

Outbound references

Observation eb7e68e9-610a-444a-9dda-da0739877316 · outbound

This paper cites Identification of drug-targ et interac- tions via multi-view graph regularized link propagation mo del,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Identification of drug-targ et interac- tions via multi-view graph regularized link propagation mo del,

Reference 1

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation b8bc9e23-333c-4dff-93de-0952e0333933 · outbound

This paper cites ChemoGraph: Interactive visual exploration o f the chemical space,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning ChemoGraph: Interactive visual exploration o f the chemical space,

Reference 2

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 9ccab110-0f03-437d-bd30-9da23c2dadd3 · outbound

This paper cites an unresolved cited work.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Unresolved cited work

Reference 3

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 85b0eeff-d12b-4a37-b21e-cff40a35c1b0 · outbound

This paper cites Molecular ge nerative graph neural networks for drug discovery ,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Molecular ge nerative graph neural networks for drug discovery ,

Reference 4

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 8a657452-920f-4b58-a1c8-70d7f48afdc1 · outbound

This paper cites Estimated resear ch and development investment needed to bring a new medicine to market, 2009-2018,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Estimated resear ch and development investment needed to bring a new medicine to market, 2009-2018,

Reference 5

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 41fd19ba-9f03-439f-9594-58a68f693a56 · outbound

This paper cites A crowdsourcing deve l- opment approach based on a neuro-fuzzy network for creating innovative product concepts,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning A crowdsourcing deve l- opment approach based on a neuro-fuzzy network for creating innovative product concepts,

Reference 6

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation beb30582-1f0b-4e88-beff-f5651fb66288 · outbound

This paper cites Discovery of nov el inhibitors of a critical brain enzyme using a homology model and a deep convolutional neural network,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Discovery of nov el inhibitors of a critical brain enzyme using a homology model and a deep convolutional neural network,

Reference 7

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 05e5d1dd-da52-410d-be8d-c59786c678df · outbound

This paper cites The light and dark sides of virtual scree ning: what is there to know?.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning The light and dark sides of virtual scree ning: what is there to know?

Reference 8

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 4fc75daa-7b14-4df5-bacf-9aa20d7b21b1 · outbound

This paper cites Machine lear ning in virtual screening,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Machine lear ning in virtual screening,

Reference 9

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation e0535aec-fa76-4744-86f1-fcc49b1f1bd6 · outbound

This paper cites Automated de novo drug desi gn: are we nearly there yet?.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Automated de novo drug desi gn: are we nearly there yet?

Reference 10

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 53a3063c-55f8-415c-83a3-7e7a264ea40e · outbound

This paper cites A review on applications of com puta- tional methods in drug screening and design,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning A review on applications of com puta- tional methods in drug screening and design,

Reference 11

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation fab9dacb-fd6a-4489-8279-21cf7e612025 · outbound

This paper cites Discovery and structure–activity analysis of selective e strogen receptor modulators via similarity-based virtual screeni ng,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Discovery and structure–activity analysis of selective e strogen receptor modulators via similarity-based virtual screeni ng,

Reference 12

Resolution
verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 7a4e261d-00d7-4f35-9c34-e230733e575b · outbound

This paper cites Mol ec- ular graph enhanced transformer for retrosynthesis predic tion,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Mol ec- ular graph enhanced transformer for retrosynthesis predic tion,

Reference 13

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation ce27d3b6-9f1e-4fc6-9487-f87d5c35ca4c · outbound

This paper cites Bifunctional tools to study adenosine receptors ,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Bifunctional tools to study adenosine receptors ,

Reference 14

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.877243Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 68b30d03-d714-467c-9891-b36b0632ac9a · outbound

This paper cites Molecula r property prediction and molecular design using a supervise d grammar variational autoencoder,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Molecula r property prediction and molecular design using a supervise d grammar variational autoencoder,

Reference 15

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 95205c9f-85a3-4630-9507-4f131c9dfaed · outbound

This paper cites Atte ntion- based generative models for de novo molecular design,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Atte ntion- based generative models for de novo molecular design,

Reference 16

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation fd1e3c7f-012b-4576-b89f-b866797c68ba · outbound

This paper cites MolGAN: An implicit generative model for small molecular graphs.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning MolGAN: An implicit generative model for small molecular graphs

Reference 17

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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Observation bdc78d03-2fcd-4aa2-9982-0e0d672e5f6b · outbound

This paper cites Transf ormer- based objective-reinforced generative adversarial netwo rk to gen- erate desired molecules,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Transf ormer- based objective-reinforced generative adversarial netwo rk to gen- erate desired molecules,

Reference 18

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 1da811b0-14b2-456d-aa9d-669c2af4c39d · outbound

This paper cites SpotGAN: A reverse-transformer GAN generates scaffold-constrained molecules with property o ptimiza- tion,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning SpotGAN: A reverse-transformer GAN generates scaffold-constrained molecules with property o ptimiza- tion,

Reference 19

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation de3e162a-d05b-403b-9026-b662a80e271d · outbound

This paper cites The impact of assay technology as applied to safety assessment in reducing compound attritio n in drug discovery ,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning The impact of assay technology as applied to safety assessment in reducing compound attritio n in drug discovery ,

Reference 20

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 70da2411-a130-43ec-a2da-e5a2152af4b1 · outbound

This paper cites De novo structure-based drug design using deep learning,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning De novo structure-based drug design using deep learning,

Reference 21

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation e13fb895-7bd0-4261-a1f1-a422ff61ae78 · outbound

This paper cites An in silico explaina ble multiparameter optimization approach for de novo drug desi gn against proteins from the central nervous system,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning An in silico explaina ble multiparameter optimization approach for de novo drug desi gn against proteins from the central nervous system,

Reference 22

Resolution
verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 34abf542-c960-4392-94d7-d32a747df34f · outbound

This paper cites De novo generation of hit-like molecules from g ene expression signatures using artificial intelligence,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning De novo generation of hit-like molecules from g ene expression signatures using artificial intelligence,

Reference 23

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.806225Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 2f40462f-8bae-43ac-b1a5-3e52c409f52a · outbound

This paper cites TRIOMPHE: Transcriptome- based inference and generation of molecules with desired phenoty pes by machine learning,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning TRIOMPHE: Transcriptome- based inference and generation of molecules with desired phenoty pes by machine learning,

Reference 24

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 363588cd-1cc6-4156-af46-57ff87656ec9 · outbound

This paper cites Captur ing temporal dynamics of users’ preferences from purchase hist ory big data for recommendation system,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Captur ing temporal dynamics of users’ preferences from purchase hist ory big data for recommendation system,

Reference 25

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.788138Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation d84c2ea0-ea5e-465a-946f-8813e240489e · outbound

This paper cites A multi-factor approa ch for stock price prediction by using recurrent neural networ ks,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning A multi-factor approa ch for stock price prediction by using recurrent neural networ ks,

Reference 26

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.778011Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 598db102-3514-4ddb-b342-6acc4ab35ba9 · outbound

This paper cites Time series forecasting of petro leum production using deep LSTM recurrent networks,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Time series forecasting of petro leum production using deep LSTM recurrent networks,

Reference 27

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.767913Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 00eeac7d-fa08-4859-9285-2bc7f9666863 · outbound

This paper cites From theory to experiment: transformer-based generation enables rapid discovery of novel reactions,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning From theory to experiment: transformer-based generation enables rapid discovery of novel reactions,

Reference 28

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.759097Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 70f06166-b1ce-44cf-8985-70a5d6532e66 · outbound

This paper cites an unresolved cited work.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Unresolved cited work

Reference 29

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unresolved
raw_fallback, observed 2026-08-11T00:42:08.750939Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation efc9ed44-7d5b-4894-8cd5-1cde0c84ed78 · outbound

This paper cites Structure-based design , synthesis, and evaluation of peptide-mimetic SARS 3CL prote ase inhibitors,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Structure-based design , synthesis, and evaluation of peptide-mimetic SARS 3CL prote ase inhibitors,

Reference 30

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.743051Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation a304b7bb-81db-47ed-a0f8-5bc3fd803458 · outbound

This paper cites Self-referencing embedded strings (SELFIES): A 100% robust molecular string representation,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Self-referencing embedded strings (SELFIES): A 100% robust molecular string representation,

Reference 31

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.734367Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 65a1b783-0040-4d76-aa93-7d391f9f4697 · outbound

This paper cites Junction tree var iational au- toencoder for molecular graph generation,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Junction tree var iational au- toencoder for molecular graph generation,

Reference 32

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.725962Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 13e2b0c0-04e8-4ab6-bae2-92d94a715799 · outbound

This paper cites Interpretable molec ular graph generation via monotonic constraints,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Interpretable molec ular graph generation via monotonic constraints,

Reference 33

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.716664Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

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Observation 3ba1c813-2528-459f-ba24-cd4cf364f6ca · outbound

This paper cites Small molecul e generation via disentangled representation learning,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Small molecul e generation via disentangled representation learning,

Reference 34

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.706808Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.273070Z digest=sha256:dc5c54752b4baebd51ef3820959c9f6a43bcce7bfbc00c8c054e4a3c78b894ba

Observation ffa002bf-811b-4dda-bcb3-90c6b9bce864 · outbound

This paper cites MoFlow: an invertible flow model for gen- erating molecular graphs,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning MoFlow: an invertible flow model for gen- erating molecular graphs,

Reference 35

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.697369Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.276271Z digest=sha256:ab411669b3b3bd605ceb3ba003fee5ff4d7d0fe30f61791e43ef90e0ea32aa28

Observation 43ee6369-82c9-497f-b32d-749619f65df8 · outbound

This paper cites FastFlows: Flow-Based Models for Molecular Graph Generation.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning FastFlows: Flow-Based Models for Molecular Graph Generation

Reference 36

Resolution
verified exact
local_arxiv, observed 2026-08-11T00:42:08.431153Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.279444Z digest=sha256:f7cc309111f6181f1d5c515d1553481000f1706b03ef7a70e3cc8f7ad432be61

Observation 275d69ac-83c8-4a0d-95c5-82c604b78511 · outbound

This paper cites DiGress: Discrete denoising diffusion for gr aph gen- eration,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning DiGress: Discrete denoising diffusion for gr aph gen- eration,

Reference 37

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.687873Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.282880Z digest=sha256:e61eef43d75687cc5e94f00e3eefea82d480f7055a613ba9ffb0f3616cbee6f1

Observation d618104c-76b4-4922-b811-f025b90859c4 · outbound

This paper cites Continuous control with deep reinforcement learning.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Continuous control with deep reinforcement learning

Reference 38

Resolution
unresolved
no resolver link, observed 2026-08-11T00:42:08.286068Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-11T00:42:08.286068Z digest=sha256:8f84e98364269872065fab8f57584f8c4750959b3680af1b99d89bec08349efe

Observation affc9c7e-39c0-44af-8747-5c6583d44cd1 · outbound

This paper cites Adversarial learned mol ecular graph inference and generation,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Adversarial learned mol ecular graph inference and generation,

Reference 39

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.678548Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.289544Z digest=sha256:d98be9df238c3b64af41eeaf86db81b96f251b46be5b78033802447bb95fa9c9

Observation 33f768ab-ce26-4e8c-b6e4-7fb59f067443 · outbound

This paper cites Gr ammar variational autoencoder,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Gr ammar variational autoencoder,

Reference 40

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.669355Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.292483Z digest=sha256:d67f1a056ab1572a1605bba5b9bcefd1caf8ebd975085f453363d1d6a95b4298

Observation 23bcd16e-3f2f-44fe-a382-ce8901277ce4 · outbound

This paper cites DNMG: Deep molecular generative model by fusion of 3d information for de novo drug design,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning DNMG: Deep molecular generative model by fusion of 3d information for de novo drug design,

Reference 41

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.659456Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.295147Z digest=sha256:a6963e98a89d749a2f8121d8744b20f1e40e200d6896007ada1fe457a3f84f73

Observation 2c23567f-8bcb-43b0-9c05-b706fa5f623a · outbound

This paper cites Monte-carlo simulation balan cing,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Monte-carlo simulation balan cing,

Reference 42

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.650006Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.297975Z digest=sha256:47c13c01ade5162048deaf407a604ad3d3b7c199d322dbd5eefab22b32f8f66b

Observation 92868a58-4478-4e11-a3c1-5885bdb0141f · outbound

This paper cites A review of molecular representation in the age of machine learning,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning A review of molecular representation in the age of machine learning,

Reference 43

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.640504Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.300658Z digest=sha256:8fb7e903c5230cb9afde24e7197b1fe46a5ae45f143ba36e717a12662a473186

Observation 064d4485-bcd6-4f6d-a5cf-d5c9fe4a5eac · outbound

This paper cites SELF- IES and the future of molecular string representations,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning SELF- IES and the future of molecular string representations,

Reference 44

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.631403Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.303323Z digest=sha256:3402e92e88bb86056252a43f444e6fd6f06491cf2b6c7f258b3c98e7416919af

Observation eb00b092-eb18-4e19-890a-0cfd1c1f721c · outbound

This paper cites Hierarchical Structure Enhances the Convergence and Generalizability of Linear Molecular Representation.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Hierarchical Structure Enhances the Convergence and Generalizability of Linear Molecular Representation

Reference 45

Resolution
verified exact
local_arxiv, observed 2026-08-11T00:42:08.409293Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.306280Z digest=sha256:8ac684f8002a37614eae851075fa6f07e33daf4c97a54866f2bf35424b78144d

Observation f58b1d11-5677-49e1-8f13-bb9462d8cd7d · outbound

This paper cites Predicting physiolo gical effects of chemical substances using natural language proc essing,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Predicting physiolo gical effects of chemical substances using natural language proc essing,

Reference 46

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.622741Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.309361Z digest=sha256:6bcaf0c39ebeb87e088f3f1c55a396cbe5cde47086d91a085d85f0e90bb2f489

Observation 3db83c86-ac8f-45fc-907f-1e9299470cf9 · outbound

This paper cites Advances in machine lea rn- ing with chemical language models in molecular property and reaction outcome predictions,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Advances in machine lea rn- ing with chemical language models in molecular property and reaction outcome predictions,

Reference 47

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.613541Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.312062Z digest=sha256:dde02614c7371a383a3ef8ed04358946617647ee89b925c2a0c9909f74c395d7

Observation 005125c1-e8f4-4abf-8b5d-70d68f296813 · outbound

This paper cites Exploring chemical space — generative models and their evaluation,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Exploring chemical space — generative models and their evaluation,

Reference 48

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.604479Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.314834Z digest=sha256:189238ce8ea5062cfc3e9e2695d5a29a67e17fb3c14bd70757f1dd384b210739

Observation 99f046f9-0903-4b9b-9291-7c39ed723c5c · outbound

This paper cites Lifelong genera- tive modeling,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Lifelong genera- tive modeling,

Reference 49

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.596114Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.317709Z digest=sha256:47c763327984f84732f2d5053a38044fa0bccab44f658984be693b7d548f4466

Observation f7e366f6-dc46-4e68-b5f3-6bc844a64344 · outbound

This paper cites Kullback-leibler divergence,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Kullback-leibler divergence,

Reference 50

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.587143Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.320195Z digest=sha256:99f5691da32a1483835ede62f74e575edd5973ac84b159ac8275d2cb8c7c46af

Observation 02630eb3-3b90-49d4-aaef-ab70c37e5be4 · outbound

This paper cites LINCS canvas browser: interactive web app to query , browse and interrogate lincs l1000 gene expression signatures,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning LINCS canvas browser: interactive web app to query , browse and interrogate lincs l1000 gene expression signatures,

Reference 51

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.577326Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.322710Z digest=sha256:671f42433e17bbdcf3162ef8539e851972af68e1ce9106317ceeb557463c7633

Observation a8b8dfb7-34eb-496b-9bf0-5f3bef67c991 · outbound

This paper cites Extraction and analysis of signatures from the gene expression omnibus by the crowd,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Extraction and analysis of signatures from the gene expression omnibus by the crowd,

Reference 52

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.567443Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.325545Z digest=sha256:40642b7a1c3b760fdb7a6970b2e2442ea716ec42aaa413fb5f67f124716d6c19

Observation 7385a13e-e9fd-4939-8440-21dafc6012ba · outbound

This paper cites Dropout: a simple way to prevent neural networks from overfitting,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Dropout: a simple way to prevent neural networks from overfitting,

Reference 53

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.556575Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.328106Z digest=sha256:f75886870c2d96939a77d75d1c4846da0963b8b9c40c83b4f7a85acf7c333b23

Observation 61f0ebd4-2fca-481a-8ce1-2ae82443a191 · outbound

This paper cites Adam: A Method for Stochastic Optimization.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Adam: A Method for Stochastic Optimization

Reference 54

Resolution
unresolved
no resolver link, observed 2026-08-11T00:42:08.330758Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-11T00:42:08.330758Z digest=sha256:c4fc92d119b96fb8e4cb27d09be16711b965f9f6d5edc4552b948e44c6a65dbc

Observation 343a9b34-3838-482c-a067-f0b625b63fff · outbound

This paper cites Quantifying the chemical beauty of drugs,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Quantifying the chemical beauty of drugs,

Reference 55

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.546923Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.333678Z digest=sha256:e19f0efe2c3498dfc1b458e6a1b3c1503aee4e983a233748bb0a75554a5139bd

Observation 27593e0d-2b3a-4beb-97da-4e52625bfbdc · outbound

This paper cites Estimation of synthetic a ccessibility score of drug-like molecules based on molecular complexity and fragment contributions,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Estimation of synthetic a ccessibility score of drug-like molecules based on molecular complexity and fragment contributions,

Reference 56

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.536933Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.336127Z digest=sha256:bac8774af2011be903c063cff4a3a37a8040a68526f0f8ddc26fcad2b77f9e2c

Observation dd42d43d-e3c0-44dc-be29-0e01ed791090 · outbound

This paper cites Life beyond the tanimoto co- efficient: similarity measures for interaction fingerprint s,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Life beyond the tanimoto co- efficient: similarity measures for interaction fingerprint s,

Reference 57

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.527074Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.338762Z digest=sha256:d7cbc720ceb65703b1300e2978289bc978f92f6d0f228d91068ae55f0461fc55

Observation f4c6b241-2c84-4b41-af3f-454383a910aa · outbound

This paper cites Rdkit documentation,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Rdkit documentation,

Reference 58

Resolution
unresolved
no resolver link, observed 2026-08-11T00:42:08.341883Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-11T00:42:08.341883Z digest=sha256:1e742f2abfc3c5e404af0b8edef1ca683da10f7f1981e642d11b5de7fdfe81eb

Observation 25399461-984b-4d08-8b93-83b86185f2bb · outbound

This paper cites MolFinder: an evolutionary algorit hm for the global optimization of molecular properties and the ext ensive exploration of chemical space using smiles,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning MolFinder: an evolutionary algorit hm for the global optimization of molecular properties and the ext ensive exploration of chemical space using smiles,

Reference 59

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.511678Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.345022Z digest=sha256:f813a9c0ac4b241fddef91735c1fe8ea3ea16749d37ac5e51277b4824dc4eca6

Observation 00a7ea57-eaed-47cc-9f4d-8519aba53b15 · outbound

This paper cites Prediction of drug-likeness using grap h convolutional attention network,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Prediction of drug-likeness using grap h convolutional attention network,

Reference 60

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.503029Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.349401Z digest=sha256:cf17ebd4716b76fa44a68126b37173fe795ac4ac737e0e4597f40a10de06c87c

Observation f34c1851-e84b-462f-8d59-2a6e16f819ba · outbound

This paper cites Extended-connectivity fingerpr ints,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Extended-connectivity fingerpr ints,

Reference 61

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.493608Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.352585Z digest=sha256:e72b0bfb75a515d4af562d7aa6a858b666085f68699473968fb28a3f7bbedc4c

Observation 3c8a5a70-e5c1-4bf9-a069-766a6816462a · outbound

This paper cites Improving MRI segmentation with probabilistic GHSOM and multiobjective optimization,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Improving MRI segmentation with probabilistic GHSOM and multiobjective optimization,

Reference 62

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.483380Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.355714Z digest=sha256:919e2dbc50d6ee666b87ae30be6b73d9454c88b376a09a0fdb275ab05157759c

Observation 7ab8a1ad-3267-4c91-8e74-17a63697f984 · outbound

This paper cites Single-layer artificial neural networks for gene expressio n analy- sis,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Single-layer artificial neural networks for gene expressio n analy- sis,

Reference 63

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.473243Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.358893Z digest=sha256:7263622209d561a1321dfd284c11d838088332ae0c9caec213d02f80a621b09e

Observation ad5c7505-3bd0-44eb-8aa0-1e204912ba81 · outbound

This paper cites De novo drug design based on patient gene expression profiles vi a deep learning,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning De novo drug design based on patient gene expression profiles vi a deep learning,

Reference 64

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.462431Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.362291Z digest=sha256:51be8867e0fc230795e0d9cb2f580693738de1067e4d1890dabf846e7f3ede19

Observation f7ac7696-4d26-490d-a1a0-543e29709017 · outbound

This paper cites Prediction of cancer drugs by chemical-chem ical interactions,.

De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning Prediction of cancer drugs by chemical-chem ical interactions,

Reference 65

Resolution
verified fuzzy
raw_fallback, observed 2026-08-11T00:42:08.452080Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-11T00:42:08.365679Z digest=sha256:a677de835f979baf6eb470e69524d90bd0a60ea09e94bd284c215b2328bf458c

Pith citing papers

Observation 07b7fcaf-2a47-4781-b735-7f1c68e1da14 · inbound

TextOmics-Guided Diffusion for Hit-like Molecular Generation cites this paper.

TextOmics-Guided Diffusion for Hit-like Molecular Generation De Novo Generation of Hit-like Molecules from Gene Expression Profiles via Deep Learning

Reference 13

Resolution
verified exact
local_arxiv, observed 2026-08-06T17:46:52.949950Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-12T06:34:41.77262+00:00.

source=pdf_text observed=2026-08-06T17:46:50.670273Z digest=sha256:493ad4b6c59abcb0155b51dd9f179456dc175b7dd3d3b753fcbf9b823cf78951