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Paper Citation Record · LEDGER

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics

As of 9 August 2026, this Paper Citation Record lists 74 of 74 outbound references and 0 inbound Pith citation observations for arXiv:2507.16531.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2507.16531 v1

Coverage vector

measured 74 of 74 reference resolution

Typed states for the displayed outbound observations.

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measured 74 of 74 standing notices

One-hop event checks from named stored sources.

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measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

74 of 74 outbound references displayed

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External citation measurements

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Outbound references

Observation 98a0e625-5c2c-4d4a-ba66-83c14a8a90c5 · outbound

This paper cites Computer simulation of liquids.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Computer simulation of liquids

Reference 1

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Observation da98bb84-09c4-47ed-8ed5-9859b1d1fc3d · outbound

This paper cites Understanding molecular simulation: from algorithms to applications.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Understanding molecular simulation: from algorithms to applications

Reference 2

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Observation f7be812a-606b-41a2-833b-baaff22a839c · outbound

This paper cites The martini force field: coarse grained model for biomolecular simulations.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics The martini force field: coarse grained model for biomolecular simulations

Reference 3

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Observation 697ff453-97fa-4e87-92f2-c0cf2b297fce · outbound

This paper cites Coarse-grained protein models and their applications.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Coarse-grained protein models and their applications

Reference 4

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Observation 62c3973c-0def-4e71-a221-1135d14168c1 · outbound

This paper cites Uncertainty driven active learning of coarse grained free energy models.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Uncertainty driven active learning of coarse grained free energy models

Reference 5

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Observation f9cad4ec-09c4-4c21-9c28-da601f0b60e5 · outbound

This paper cites K-means clustering coarse-graining (kmc-cg): A next generation methodology for determining optimal coarse-grained mappings of large biomolecules.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics K-means clustering coarse-graining (kmc-cg): A next generation methodology for determining optimal coarse-grained mappings of large biomolecules

Reference 6

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Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Unresolved cited work

Reference 7

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Observation 083475fa-5f79-4c4f-b18c-5e42e2f15315 · outbound

This paper cites Insight into the density-dependence of pair potentials for predictive coarse-grained models.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Insight into the density-dependence of pair potentials for predictive coarse-grained models

Reference 8

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Observation dd32ad99-7c9f-45ad-be08-44183465f838 · outbound

This paper cites Unveiling interactions of a peptide-bound monolayer-protected metal nanocluster with a lipid bilayer.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Unveiling interactions of a peptide-bound monolayer-protected metal nanocluster with a lipid bilayer

Reference 9

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Observation 82da2f1c-73fb-4a0a-9c64-64a451fbdf45 · outbound

This paper cites Evolutionary algorithm in the optimization of a coarse-grained force field.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Evolutionary algorithm in the optimization of a coarse-grained force field

Reference 10

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Observation 55031dcf-4ace-475e-8804-b2885d14755f · outbound

This paper cites Temporally coher- ent backmapping of molecular trajectories from coarse-grained to atomistic resolution.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Temporally coher- ent backmapping of molecular trajectories from coarse-grained to atomistic resolution

Reference 11

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Observation d853fc4f-6eb0-4638-81f8-f5fd59f9d971 · outbound

This paper cites Multiscale coarse graining of liquid-state systems.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Multiscale coarse graining of liquid-state systems

Reference 12

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Observation c296a3af-b552-48ad-95ec-edac06fb714c · outbound

This paper cites Structure of a tractable stochastic mimic of soft particles.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Structure of a tractable stochastic mimic of soft particles

Reference 13

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Observation 48d539a2-5c88-432e-bc6a-9509bac03f5b · outbound

This paper cites Derivation of coarse-grained potentials via multistate iterative boltzmann inversion.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Derivation of coarse-grained potentials via multistate iterative boltzmann inversion

Reference 14

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Observation 4ada63d6-bd53-4692-b198-356e3b71cdfd · outbound

This paper cites Bottom-up coarse-grained models that accurately describe the structure, pressure, and compressibility of molecular liquids.The Journal of chemical physics, 143(24), 2015.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Bottom-up coarse-grained models that accurately describe the structure, pressure, and compressibility of molecular liquids.The Journal of chemical physics, 143(24), 2015

Reference 15

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Observation 83b11a80-3b50-4dc0-b9b7-a1bcc47d9327 · outbound

This paper cites Transfer-learning-based coarse-graining method for simple fluids: toward deep inverse liquid-state theory.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Transfer-learning-based coarse-graining method for simple fluids: toward deep inverse liquid-state theory

Reference 16

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Observation 5b8a80c5-350c-48db-9062-8275dac1ee6e · outbound

This paper cites Influence of topology on effective potentials: coarse-graining ring polymers.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Influence of topology on effective potentials: coarse-graining ring polymers

Reference 17

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Observation a232f74c-a752-4a78-89ac-dc4ba2313abd · outbound

This paper cites Effective surface coverage of coarse- grained soft matter.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Effective surface coverage of coarse- grained soft matter

Reference 18

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Observation 208db526-f0b3-493d-babc-e3832ee263f7 · outbound

This paper cites Solvent entropy and coarse-graining of polymer lattice models.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Solvent entropy and coarse-graining of polymer lattice models

Reference 19

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Observation 725ddac8-5aad-44e0-b50a-adeacff098f4 · outbound

This paper cites Integrating machine learning in the coarse-grained molecular simulation of polymers.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Integrating machine learning in the coarse-grained molecular simulation of polymers

Reference 20

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Observation 7cbc45b2-1264-4a32-9a43-238cfae1a098 · outbound

This paper cites Coarse grained protein- lipid model with application to lipoprotein particles.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Coarse grained protein- lipid model with application to lipoprotein particles

Reference 21

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Observation be08fb6a-c3c6-4b7b-9ecf-c9cb2bad9660 · outbound

This paper cites Coarse-graining methods for computational biology.Annual review of biophysics, 42(1):73–93, 2013.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Coarse-graining methods for computational biology.Annual review of biophysics, 42(1):73–93, 2013

Reference 22

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Observation 349df33d-3b32-47ee-9b7e-7e56469ba05f · outbound

This paper cites Perspective: Coarse-grained models for biomolecular systems.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Perspective: Coarse-grained models for biomolecular systems

Reference 23

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Observation 09abad8a-ec72-4d7c-96e9-b9bf0fe43c90 · outbound

This paper cites Flow-matching: Effi- cient coarse-graining of molecular dynamics without forces.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Flow-matching: Effi- cient coarse-graining of molecular dynamics without forces

Reference 24

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Observation b859dc57-5a79-46a0-9db1-4ebd35462870 · outbound

This paper cites Exploring the landscape of model representations.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Exploring the landscape of model representations

Reference 25

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Observation 0f0e9b50-af20-4a2d-947e-3062d929dcfe · outbound

This paper cites A data-driven perspective on the hierarchical assembly of molecular structures.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics A data-driven perspective on the hierarchical assembly of molecular structures

Reference 26

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Observation 078cbdc1-f779-4f74-b167-9cfb110f28fe · outbound

This paper cites Openmscg: A software tool for bottom-up coarse-graining.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Openmscg: A software tool for bottom-up coarse-graining

Reference 27

Resolution
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Observation dcac804b-e081-47e6-a939-24c5d1fe2dd6 · outbound

This paper cites Graph neural network based coarse-grained mapping prediction.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Graph neural network based coarse-grained mapping prediction

Reference 28

Resolution
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Observation 83fcdf73-56a6-4108-912c-5265ad648ae8 · outbound

This paper cites Coarse-graining auto-encoders for molecular dynamics.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Coarse-graining auto-encoders for molecular dynamics

Reference 29

Resolution
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No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

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Observation 0f365bb1-1a18-4137-b5c3-52d0b1fa0808 · outbound

This paper cites Martini 3: a general purpose force field for coarse-grained molecular dynamics.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Martini 3: a general purpose force field for coarse-grained molecular dynamics

Reference 30

Resolution
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Observation 75282f5f-c1cc-4f0d-a3c1-05bbd3280572 · outbound

This paper cites Machine learning coarse- grained potentials of protein thermodynamics.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Machine learning coarse- grained potentials of protein thermodynamics

Reference 31

Resolution
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Observation 9aec5fab-29cf-44f6-bf37-9a778c1a6094 · outbound

This paper cites Cgcompiler: auto- mated coarse-grained molecule parametrization via noise-resistant mixed-variable optimization.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Cgcompiler: auto- mated coarse-grained molecule parametrization via noise-resistant mixed-variable optimization

Reference 32

Resolution
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Observation 02e61e0d-d939-4095-be00-1ed928779fac · outbound

This paper cites Automated coarse-grained mapping algorithm for the martini force field and benchmarks for membrane–water partitioning.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Automated coarse-grained mapping algorithm for the martini force field and benchmarks for membrane–water partitioning

Reference 33

Resolution
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Source-reported events for the cited work

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Observation 3ba451bb-5a2f-4206-8ce8-368fafed631d · outbound

This paper cites Generative Coarse-Graining of Molecular Conformations.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Generative Coarse-Graining of Molecular Conformations

Reference 34

Resolution
unresolved
no resolver link, observed 2026-08-06T15:16:01.845392Z

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Unavailable: canonical work link unavailable.

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Observation c9c66aed-6c2f-41b8-90aa-ceb97cd18bb2 · outbound

This paper cites Coarsenconf: Equivariant coarsening with aggre- gated attention for molecular conformer generation.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Coarsenconf: Equivariant coarsening with aggre- gated attention for molecular conformer generation

Reference 35

Resolution
verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

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Observation ee13521e-e455-47cf-b640-c37911ea8c6c · outbound

This paper cites An information-theory- based approach for optimal model reduction of biomolecules.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics An information-theory- based approach for optimal model reduction of biomolecules

Reference 36

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.986024Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

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Observation 387b290e-6b62-4e8d-af40-1eb2471c7633 · outbound

This paper cites an unresolved cited work.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Unresolved cited work

Reference 37

Resolution
unresolved
raw_fallback, observed 2026-08-06T15:16:02.967170Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

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Observation c56a2dc7-a403-4e74-ac80-1f5380a38161 · outbound

This paper cites Graph theory meets ab initio molecular dynamics: Atomic structures¡? format?¿ and transformations at the nanoscale.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Graph theory meets ab initio molecular dynamics: Atomic structures¡? format?¿ and transformations at the nanoscale

Reference 38

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.950547Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.879765Z digest=sha256:08ba6b304a7b2d130406221097a4b5a44bf2855535068128cfdc2deb1a87c0b2

Observation 9fb61996-c335-4285-8e52-2e1f616ffb45 · outbound

This paper cites Deepcg: Constructing coarse-grained models via deep neural networks.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Deepcg: Constructing coarse-grained models via deep neural networks

Reference 39

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.934025Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.886612Z digest=sha256:e7764f4ff73e5dbbcb55b7e49e1402ecab7add46cb4748c8e4e4f76bc6539fe9

Observation 56c13136-5e7b-4bd1-9bb2-23eb251d8d5d · outbound

This paper cites Machine-learned coarse- grained models.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Machine-learned coarse- grained models

Reference 40

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.912460Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

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Observation 42ae0bfe-eb44-4df1-95de-b1f0c28a2b8a · outbound

This paper cites Neural network based prediction of conformational free energies-a new route toward coarse-grained simulation models.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Neural network based prediction of conformational free energies-a new route toward coarse-grained simulation models

Reference 41

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.894606Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.902207Z digest=sha256:9f4203da0b4342482c6a5346f29883f54b0bfa7e6f86c38ed9d6db45203400f6

Observation 7eeff86f-e5fd-4652-a529-6898d9f30b86 · outbound

This paper cites Machine learning of coarse-grained molecular dynamics force fields.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Machine learning of coarse-grained molecular dynamics force fields

Reference 42

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.873136Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.909137Z digest=sha256:9bb6bda2afb2e3c0db4b16a4d9312ee8472fdab0e3b09b17760437b420d9e8f1

Observation 7b302118-1f23-4d46-984d-d068d4d15cb6 · outbound

This paper cites Investigating molecu- lar kinetics by variationally optimized diffusion maps.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Investigating molecu- lar kinetics by variationally optimized diffusion maps

Reference 43

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.853747Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.914046Z digest=sha256:6f4a9d7821c9020f48504869ec73e13080b691e92b5d8f4e03bf5ae2be09dcf4

Observation 690a85bd-e893-4974-b3a8-8bdd4f7e417e · outbound

This paper cites Deep coarse-grained potentials via relative entropy minimization.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Deep coarse-grained potentials via relative entropy minimization

Reference 44

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.830305Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.919198Z digest=sha256:70f82c21225a9e600276696fc753210d3e780108c9c659cb834f04581a6e4834

Observation 89205b48-cba0-4bd9-8ed0-942238247fc5 · outbound

This paper cites Graph-based approach to systematic molecular coarse-graining.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Graph-based approach to systematic molecular coarse-graining

Reference 45

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.795883Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.924155Z digest=sha256:790429590a36d65d36ae8ae6dc30c023b05b00f6d19e85b8a6c6281eadbe6648

Observation 3d30ea0c-c9cb-4dd8-8a38-d72e3cf619c4 · outbound

This paper cites Encoding and selecting coarse-grain mapping operators with hierarchical graphs.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Encoding and selecting coarse-grain mapping operators with hierarchical graphs

Reference 46

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.769725Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.929223Z digest=sha256:23feea6b19643348400561609b03ee4a8d46f5a4ba86444f13763384f40f07c1

Observation 7ee3d264-9453-4a98-92a0-97fb0c445b11 · outbound

This paper cites Bottom-up coarse-graining: Principles and perspectives.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Bottom-up coarse-graining: Principles and perspectives

Reference 47

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.746906Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.935431Z digest=sha256:3e64a633a58867f7a01e226bb999c38a4b60dac4b911287eab438c3908bf8574

Observation 3542a172-e243-4ae1-a82e-1346c268ae10 · outbound

This paper cites Top-down machine learning of coarse- grained protein force fields.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Top-down machine learning of coarse- grained protein force fields

Reference 48

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.724765Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.941572Z digest=sha256:d3f940d61618d0eebe72dbe14115555c8032d75a8939a1bae0144b17e74a0e94

Observation fde1e475-60af-4e04-8e93-3b488fb01af3 · outbound

This paper cites Machine learning implicit solvation for molecular dynamics.The Journal of Chemical Physics, 155(8), 2021.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Machine learning implicit solvation for molecular dynamics.The Journal of Chemical Physics, 155(8), 2021

Reference 49

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.698209Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.946897Z digest=sha256:88ab03b60a830191dc6ee41b84cb49eeca68b99d7ffa025ffd0587991121ed1a

Observation 5874f445-caac-4a41-a2e8-8e95950d6f72 · outbound

This paper cites Physnet: A neural network for predicting energies, forces, dipole moments, and partial charges.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Physnet: A neural network for predicting energies, forces, dipole moments, and partial charges

Reference 50

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.673312Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.952951Z digest=sha256:b916603dd1cb696a951cc1723e9e1d9a0552a238ac4ec1cceab20b15e17fe068

Observation 362d6e34-a44b-49c8-b876-dc4c1c36d5b2 · outbound

This paper cites Accurate Machine Learned Quantum-Mechanical Force Fields for Biomolecular Simulations.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Accurate Machine Learned Quantum-Mechanical Force Fields for Biomolecular Simulations

Reference 51

Resolution
verified exact
local_arxiv, observed 2026-08-06T15:16:02.216974Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.959060Z digest=sha256:e57de503134e3b90e84001046b7a7a4268c1c977ab3d0cf95765da882199ba2c

Observation 543948e8-0b6a-42c4-a128-9193a8bc0f2e · outbound

This paper cites Machine learning for molecular simulation.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Machine learning for molecular simulation

Reference 52

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.653721Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.965789Z digest=sha256:db6cb505680e5e65e4be1744738684de9cf8ac0d81885684dafa1f91082ed36d

Observation 3b2a3ecb-1ed9-47bf-8438-14f2dd4fd0e6 · outbound

This paper cites Multi- body effects in a coarse-grained protein force field.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Multi- body effects in a coarse-grained protein force field

Reference 53

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.633292Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.976060Z digest=sha256:3b10dbab1598e1055e14a66a9ab849180cd2ceb869c950ece45cd8327494fab3

Observation 9b4d93ec-714a-4056-a35e-17e09ffc9c6a · outbound

This paper cites The multiscale coarse-graining method.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics The multiscale coarse-graining method

Reference 54

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.607331Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.981758Z digest=sha256:a1922e75dfe5d2f700cfc8b6eecf745fcccbae6df0655c9cf5827fda0c3cc50c

Observation 447896a5-0b22-4749-8029-f1210f610de4 · outbound

This paper cites Coarse graining molecular dynamics with graph neural networks.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Coarse graining molecular dynamics with graph neural networks

Reference 55

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.587687Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

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Observation ce396737-4cb9-4956-a6ee-46b3da365c13 · outbound

This paper cites Machine learned coarse- grained protein force-fields: Are we there yet? Current opinion in structural biology , 79:102533, 2023.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Machine learned coarse- grained protein force-fields: Are we there yet? Current opinion in structural biology , 79:102533, 2023

Reference 56

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.570757Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:01.995178Z digest=sha256:d3a384130f378c80fef152147b7de6a1733e44c143042ed98684200543669d72

Observation 0289db66-4899-4e05-b71b-afdfe3a96f48 · outbound

This paper cites Navigating protein landscapes with a machine-learned transferable coarse-grained model.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Navigating protein landscapes with a machine-learned transferable coarse-grained model

Reference 57

Resolution
unresolved
no resolver link, observed 2026-08-06T15:16:02.001124Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-06T15:16:02.001124Z digest=sha256:8ee419b16143bc3df675c566b4ce4af7b92e3388cfc686400e190bf5be005175

Observation e4030aae-32d6-472b-a384-853e8cb5dabe · outbound

This paper cites Many-Body Coarse-Grained Molecular Dynamics with the Atomic Cluster Expansion.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Many-Body Coarse-Grained Molecular Dynamics with the Atomic Cluster Expansion

Reference 58

Resolution
verified exact
local_arxiv, observed 2026-08-06T15:16:02.163756Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

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Observation f6bf134b-7891-48c2-9c70-a6950677566a · outbound

This paper cites Mace: Higher order equivariant message passing neural networks for fast and accurate force fields.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Mace: Higher order equivariant message passing neural networks for fast and accurate force fields

Reference 59

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.549894Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.014421Z digest=sha256:05014286ff5308ac996c090f798b257b92f952776e8b0e14dd5a527f438bbb81

Observation 493e087a-4934-40c0-a2a5-49a1ec49bce1 · outbound

This paper cites Crash testing machine learning force fields for molecules, materials, and interfaces: Model analysis in the tea challenge 2023.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Crash testing machine learning force fields for molecules, materials, and interfaces: Model analysis in the tea challenge 2023

Reference 60

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.530751Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.021630Z digest=sha256:345669a703ded894ef40e66c2eaf2a24712f9566a8a71de57d46cb143e0d6dc5

Observation 60da65ca-8acf-421d-b74c-eddc2e5d2c21 · outbound

This paper cites Projection of diffusions on submanifolds: Application to mean force computation.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Projection of diffusions on submanifolds: Application to mean force computation

Reference 61

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.508415Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.030445Z digest=sha256:99dac3af6a30baa857b1dc1459e3a6c3089d447cf712880fee653bd539f07c29

Observation 0d95f316-a8a9-4636-b513-2ebebf18290a · outbound

This paper cites Evaluation of the mace force field architecture: From medicinal chemistry to materials science.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Evaluation of the mace force field architecture: From medicinal chemistry to materials science

Reference 62

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.489590Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.039787Z digest=sha256:e9aa5bc7a344f6bd86c16b9e517ca40e41c47bc036c69d58e2286151ca6082a9

Observation 08c83f7d-2ca5-40e4-931d-d7baf6a15c0d · outbound

This paper cites Trans- ferability of data sets between machine-learned interatomic potential algorithms.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Trans- ferability of data sets between machine-learned interatomic potential algorithms

Reference 63

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.470912Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.045354Z digest=sha256:f514b0e8b80699da3b398327d6be24d4554be29615b5b5a7e859f09cfa814f6d

Observation 31771723-762a-47c6-895e-4494d7b085fb · outbound

This paper cites Transferable machine learn- ing interatomic potential for bond dissociation energy prediction of drug-like molecules.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Transferable machine learn- ing interatomic potential for bond dissociation energy prediction of drug-like molecules

Reference 64

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.451705Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.049898Z digest=sha256:b63edf343f67721a3f75ac0067a67b1451bff7778e9735e8a46921318199d038

Observation 49e4af52-9216-4d75-a279-c1c28406b268 · outbound

This paper cites Featured graph coarsening with similarity guarantees.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Featured graph coarsening with similarity guarantees

Reference 65

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.435790Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.056511Z digest=sha256:4cdb0b4ecba42dbb7b0324b471af3625c6866d09c32633d10a889fd3584357fe

Observation b2aaf5cd-fa8b-4c6f-be23-861ad248cb63 · outbound

This paper cites A unified framework for optimization-based graph coarsening.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics A unified framework for optimization-based graph coarsening

Reference 66

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.419696Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.064933Z digest=sha256:d6d4bf8688efdddf93873ba07430bcb0f3c75308d84294cf40a3750872f0a681

Observation ae7f9903-2747-48fd-bc25-3003afce7ee9 · outbound

This paper cites Optimization frame- work for semi-supervised attributed graph coarsening.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Optimization frame- work for semi-supervised attributed graph coarsening

Reference 67

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.401001Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.070980Z digest=sha256:10235ab2d7d95906ce2c767017d4829d782b300a9a9a5f92ccd6b524c6d0626d

Observation 0751b5d9-302a-4233-bf1f-52ea2ab6c3bb · outbound

This paper cites Multi-component coarsened graph learning for scaling graph machine learning.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Multi-component coarsened graph learning for scaling graph machine learning

Reference 68

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.382454Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.076673Z digest=sha256:1b2653d7a24a4c7d43added74606cf745bc9a4892a794b4e010f0376387418fa

Observation b37bb22c-5b18-4b06-81ea-cb9b6f346d1d · outbound

This paper cites Graph coarsening with preserved spectral properties.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Graph coarsening with preserved spectral properties

Reference 69

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.358886Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.081808Z digest=sha256:6eb5f42b788a18cf2494e74780b80e76f9178eea6c84879e88dea023c7e6b5fd

Observation 92cbbe43-d248-4d0d-b041-59dc9833c93b · outbound

This paper cites Graph reduction with spectral and cut guarantees.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Graph reduction with spectral and cut guarantees

Reference 70

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.341076Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.087818Z digest=sha256:f7e57f50baf5c011fb4dec43118d0cb7dc99c1881554cd6ce0fdacbd06ee8345

Observation 0d9a3c2b-89bb-4d0a-8f92-fe59ca770bef · outbound

This paper cites an unresolved cited work.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Unresolved cited work

Reference 71

Resolution
unresolved
raw_fallback, observed 2026-08-06T15:16:02.324389Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.092608Z digest=sha256:9d36171c205a76f5bf56127beaaad3d0cdef40788d40b7f1ca785deb084de610

Observation f8f7b251-3540-484c-8151-debff387bbfc · outbound

This paper cites The atomic simu- lation environment—a python library for working with atoms.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics The atomic simu- lation environment—a python library for working with atoms

Reference 72

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.305655Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.097568Z digest=sha256:69dd33f7ea471d1a238cba83d8f87c0389453695a10c5bc73f5beaec3cfd7b5c

Observation 7d7cbce5-a69d-4268-b8b1-8dd29b772136 · outbound

This paper cites On the role of gradients for machine learning of molecular energies and forces.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics On the role of gradients for machine learning of molecular energies and forces

Reference 73

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.284238Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.102928Z digest=sha256:f7039b6ffaf2bb27dcb24128bb8bcdaab5a00e1bb7ddded1cf90f1937b0600a8

Observation 24c45759-6cb4-4926-b509-5c45b98f36fe · outbound

This paper cites Thermodynamic transferability in coarse-grained force fields using graph neural networks.

Graph-Coarsening for Machine Learning Coarse-grained Molecular Dynamics Thermodynamic transferability in coarse-grained force fields using graph neural networks

Reference 74

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T15:16:02.261879Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-06T15:16:02.108868Z digest=sha256:645e8fafcdaf42c7bb47223378d7d07ac7a25838d4473c1ead5e6fc8db5f9c44

Pith citing papers

No inbound Pith citation observations are available.