pith. sign in
theorem

ideal_enzyme_unit_rate

proved
show as:
module
IndisputableMonolith.Chemistry.EnzymeCatalysis
domain
Chemistry
line
121 · github
papers citing
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plain-language theorem explainer

An ideal enzyme satisfying exact J-cost cancellation at the transition state produces a catalyzed rate factor of 1. Researchers modeling enzymatic kinetics within Recognition Science cite this to recover the maximum rate enhancement from zero saddle cost. The proof unfolds the rate definition, substitutes the zero-barrier lemma, and simplifies.

Claim. If an enzyme satisfies the complementary J-cost cancellation condition at its transition-state coordinate, then its catalyzed rate factor equals 1.

background

In this module an enzyme is a structure carrying a J-cost contribution function and a transition-state coordinate off the minimum. The predicate IsIdealEnzyme holds precisely when the enzyme's J-cost at that coordinate equals the negative of the bare activation barrier, flattening the saddle. The catalyzed rate is the Boltzmann factor of the resulting catalyzed barrier, with kT normalized to 1.

proof idea

The proof unfolds catalyzedRate and boltzmannFactor, rewrites the catalyzed barrier to zero via the ideal_enzyme_zero_barrier theorem, and applies simp to obtain the constant 1.

why it matters

This supplies the unit-rate step required by the downstream rate_enhancement theorem, which recovers the full exponential activation-energy factor as the ratio of catalyzed to uncatalyzed rates. It directly implements the module claim that zero saddle cost yields Boltzmann factor 1 and aligns with the J-cost lens mechanism for enzymatic catalysis.

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