An efficient enumeration algorithm is developed from sufficient conditions on subgraphs in the bipartite König representation to identify autocatalytic subnetworks and minimal cores in full metabolic networks.
DOI 10.48550/ARXIV.2511.14431
2 Pith papers cite this work. Polarity classification is still indexing.
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Stoichiometric models of the Notch-Delta pathway identify symmetry-induced bifurcations and key structural features that enable neighboring cells to adopt different fates without assuming particular kinetics.
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Enumeration of Autocatalytic Subsystems in Large Chemical Reaction Networks
An efficient enumeration algorithm is developed from sufficient conditions on subgraphs in the bipartite König representation to identify autocatalytic subnetworks and minimal cores in full metabolic networks.
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Mathematical modeling and analysis of the Notch-Delta pathway
Stoichiometric models of the Notch-Delta pathway identify symmetry-induced bifurcations and key structural features that enable neighboring cells to adopt different fates without assuming particular kinetics.