Benchmark of BINN, GraphPath, and PATH on 2622 TCGA patients shows PATH best for targeted therapy, BINN for survival, none useful for radiation, with GraphPath at 0.92 AUROC on prostate targeted therapy.
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3 Pith papers cite this work. Polarity classification is still indexing.
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SCOPE implements a relaxed sparsest-permutation approach for scalable causal structure learning that recovers Markov equivalence classes up to 10k variables using incomplete Cholesky factorization on screened supports.
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TRAPS: Therapeutic Response Analysis via Pathway-informed Stratification
Benchmark of BINN, GraphPath, and PATH on 2622 TCGA patients shows PATH best for targeted therapy, BINN for survival, none useful for radiation, with GraphPath at 0.92 AUROC on prostate targeted therapy.
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Relaxed Sparsest-Permutation Formulation for Causal Discovery at Scale
SCOPE implements a relaxed sparsest-permutation approach for scalable causal structure learning that recovers Markov equivalence classes up to 10k variables using incomplete Cholesky factorization on screened supports.
- Symmetry-Aware Convex Shrinkage for High-Dimensional Covariance Estimation