PATH gene embeddings in a graph transformer achieve 0.8766 F1 on pancancer metastasis prediction (8.8% over SOTA) and identify disease-state pathway rewiring.
L.et al.Intratumoral androgens in castration-recurrent prostate cancer.Endocrine-Related Cancer18, R175–R182 (2011)
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Graph Transformer-Based Pathway Embedding for Cancer Prognosis
PATH gene embeddings in a graph transformer achieve 0.8766 F1 on pancancer metastasis prediction (8.8% over SOTA) and identify disease-state pathway rewiring.