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Neural P$^3$M: A Long-Range Interaction Modeling Enhancer for Geometric GNNs

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arxiv 2409.17622 v1 pith:4KJPDTRY submitted 2024-09-26 cs.LG cs.AI

classification cs.LGcs.AI
keywords neuralgeometricgnnsmoleculardatasetenhancerlong-rangemodeling
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abstract

Geometric graph neural networks (GNNs) have emerged as powerful tools for modeling molecular geometry. However, they encounter limitations in effectively capturing long-range interactions in large molecular systems. To address this challenge, we introduce Neural P$^3$M, a versatile enhancer of geometric GNNs to expand the scope of their capabilities by incorporating mesh points alongside atoms and reimaging traditional mathematical operations in a trainable manner. Neural P$^3$M exhibits flexibility across a wide range of molecular systems and demonstrates remarkable accuracy in predicting energies and forces, outperforming on benchmarks such as the MD22 dataset. It also achieves an average improvement of 22% on the OE62 dataset while integrating with various architectures.

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Cited by 1 Pith paper

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  1. Learning Non-Local Molecular Interactions via Equivariant Local Representations and Charge Equilibration

    physics.chem-ph 2025-01 conditional novelty 6.0 of 10

    CELLI embeds a learnable charge equilibration solve inside equivariant GNN potentials, enabling them to capture long-range electrostatics and charge transfer with better accuracy on long-range benchmark systems and st...

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