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An Electrocardiogram Foundation Model Built on over 10 Million Recordings with External Evaluation across Multiple Domains
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Artificial intelligence (AI) has demonstrated significant potential in ECG analysis and cardiovascular disease assessment. Recently, foundation models have played a remarkable role in advancing medical AI. The development of an ECG foundation model holds the promise of elevating AI-ECG research to new heights. However, building such a model faces several challenges, including insufficient database sample sizes and inadequate generalization across multiple domains. Additionally, there is a notable performance gap between single-lead and multi-lead ECG analyses. We introduced an ECG Foundation Model (ECGFounder), a general-purpose model that leverages real-world ECG annotations from cardiology experts to broaden the diagnostic capabilities of ECG analysis. ECGFounder was trained on over 10 million ECGs with 150 label categories from the Harvard-Emory ECG Database, enabling comprehensive cardiovascular disease diagnosis through ECG analysis. The model is designed to be both an effective out-of-the-box solution, and a to be fine-tunable for downstream tasks, maximizing usability. Importantly, we extended its application to lower rank ECGs, and arbitrary single-lead ECGs in particular. ECGFounder is applicable to supporting various downstream tasks in mobile monitoring scenarios. Experimental results demonstrate that ECGFounder achieves expert-level performance on internal validation sets, with AUROC exceeding 0.95 for eighty diagnoses. It also shows strong classification performance and generalization across various diagnoses on external validation sets. When fine-tuned, ECGFounder outperforms baseline models in demographic analysis, clinical event detection, and cross-modality cardiac rhythm diagnosis. The trained model and data will be publicly released upon publication through the bdsp.io. Our code is available at https://github.com/PKUDigitalHealth/ECGFounder
Forward citations
Cited by 4 Pith papers
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Do ECG Foundation Models Transfer to Rare Cardiac Diseases? Evidence from Brugada Syndrome Detection
For Brugada syndrome detection, ECG foundation-model pre-training mainly stabilizes optimization rather than encoding transferable clinical knowledge, and fails to improve zero-shot cross-site generalization.
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Modeling Day-Long ECG Signals to Predict Heart Failure Risk with Explainable AI
DeepHHF, trained on day-long single-lead Holter ECGs from 40,174 patients, predicted incident heart failure within five years with AUROC 0.80 and external AUROC 0.81.
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Self-DANA: A Resource-Efficient Channel-Adaptive Self-Supervised Approach for ECG Foundation Models
Self-DANA combines dimension-adaptive pooling with random lead selection to fine-tune ECG foundation models on reduced-lead inputs, cutting memory and time while maintaining diagnostic accuracy.
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LSTrans: Efficient Knowledge Transfer for Lightweight and Automated ECG Classification
LSTrans delivers competitive multi-label ECG AUC and Fβ=2 scores on three clinical benchmarks while cutting peak GPU memory and training iteration time via an interleaved 1D backbone, dual-rank LoRA, and homogeneous/h...
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