Paper Citation Record · LEDGER

GeneSUM: Large Language Model-based Gene Summary Extraction

As of 17 August 2026, this Paper Citation Record lists 36 of 36 outbound references and 0 inbound Pith citation observations for arXiv:2412.18154.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2412.18154 v1

Coverage vector

measured 36 of 36 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-11T05:01:38.617252Z

measured 36 of 36 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-17T06:30:58.91139+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

36 of 36 outbound references displayed

verified exact1
verified fuzzy20
unresolved15
parse uncertain0
malformed identifier0
metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 275050ac-44bf-49e6-92ca-9780c3c4cf8c · outbound

This paper cites The ncbi taxonomy database,.

GeneSUM: Large Language Model-based Gene Summary Extraction The ncbi taxonomy database,

Reference 1

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:39.066786Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 006af134-7b63-4f6d-828f-379ab03e6f26 · outbound

This paper cites Ncbi taxonomy: a comprehensive update on curation, resources and tools,.

GeneSUM: Large Language Model-based Gene Summary Extraction Ncbi taxonomy: a comprehensive update on curation, resources and tools,

Reference 2

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:39.054314Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 88be9cf8-03d0-4a56-9e74-4f20501b85b9 · outbound

This paper cites Learning to rank-based gene summary extraction,.

GeneSUM: Large Language Model-based Gene Summary Extraction Learning to rank-based gene summary extraction,

Reference 3

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:39.042169Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 4c64210c-c625-4040-9f64-797fb4a8b304 · outbound

This paper cites Fast Abstractive Summarization with Reinforce-Selected Sentence Rewriting.

GeneSUM: Large Language Model-based Gene Summary Extraction Fast Abstractive Summarization with Reinforce-Selected Sentence Rewriting

Reference 4

Resolution: unresolved; no resolver link, observed 2026-08-11T05:01:38.492200Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 87325e38-d6cf-4930-ad87-67c9dff1972b · outbound

This paper cites Bottom-Up Abstractive Summarization.

GeneSUM: Large Language Model-based Gene Summary Extraction Bottom-Up Abstractive Summarization

Reference 5

Resolution: unresolved; no resolver link, observed 2026-08-11T05:01:38.497160Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 1ce05875-5a41-416e-8e3a-9dbbbb99eacc · outbound

This paper cites Expert knowledge-guided length-variant hierarchical label generation for pro- posal classification,.

GeneSUM: Large Language Model-based Gene Summary Extraction Expert knowledge-guided length-variant hierarchical label generation for pro- posal classification,

Reference 6

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:39.029859Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 42a692b7-6f5d-4297-9305-d14e9af0c744 · outbound

This paper cites Hierarchical interdisciplinary topic detection model for research proposal classification,.

GeneSUM: Large Language Model-based Gene Summary Extraction Hierarchical interdisciplinary topic detection model for research proposal classification,

Reference 7

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:39.018080Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 92c6a678-91c7-48b3-bc8a-fae0b5369955 · outbound

This paper cites In- terdisciplinary fairness in imbalanced research proposal topic inference: A hierarchical transformer-based method with selective interpolation,.

GeneSUM: Large Language Model-based Gene Summary Extraction In- terdisciplinary fairness in imbalanced research proposal topic inference: A hierarchical transformer-based method with selective interpolation,

Reference 8

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:39.004956Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 59f579d6-eead-4a94-86a7-1ef796c57d8f · outbound

This paper cites The automated acquisition of topic signatures for text summarization,.

GeneSUM: Large Language Model-based Gene Summary Extraction The automated acquisition of topic signatures for text summarization,

Reference 9

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:38.991475Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 7bde2274-13e9-4243-a0c1-79808abb9aba · outbound

This paper cites Towards automatic generation of gene summary,.

GeneSUM: Large Language Model-based Gene Summary Extraction Towards automatic generation of gene summary,

Reference 10

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:38.978815Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 45b965e4-2612-4049-b9e2-ae62f8993e17 · outbound

This paper cites Manning and H.

GeneSUM: Large Language Model-based Gene Summary Extraction Manning and H

Reference 11

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:38.965252Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation de09f99f-15db-43f5-b726-034f3abcdfcb · outbound

This paper cites Measuring gene functional similarity based on group-wise comparison of go terms,.

GeneSUM: Large Language Model-based Gene Summary Extraction Measuring gene functional similarity based on group-wise comparison of go terms,

Reference 12

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:38.953024Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation d81922ea-cd5a-467c-b385-5dd4d7714997 · outbound

This paper cites GPT-NER: Named Entity Recognition via Large Language Models.

GeneSUM: Large Language Model-based Gene Summary Extraction GPT-NER: Named Entity Recognition via Large Language Models

Reference 13

Resolution: unresolved; no resolver link, observed 2026-08-11T05:01:38.528729Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation f0c3799e-c007-4db3-9e58-b24a513dd69f · outbound

This paper cites Biobert based named entity recognition in electronic medical record,.

GeneSUM: Large Language Model-based Gene Summary Extraction Biobert based named entity recognition in electronic medical record,

Reference 14

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:38.939670Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 5cc789c3-7362-4acf-8682-971291b2c691 · outbound

This paper cites Biobert: a pre-trained biomedical language representation model for biomedical text mining,.

GeneSUM: Large Language Model-based Gene Summary Extraction Biobert: a pre-trained biomedical language representation model for biomedical text mining,

Reference 15

Resolution: unresolved; no resolver link, observed 2026-08-11T05:01:38.536903Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation e66ffeb5-70a8-4544-af1e-c50fcfaf06fb · outbound

This paper cites Extracting drug-drug interactions from texts with biobert and multiple entity-aware attentions,.

GeneSUM: Large Language Model-based Gene Summary Extraction Extracting drug-drug interactions from texts with biobert and multiple entity-aware attentions,

Reference 16

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:38.919549Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 31abb925-4547-4fcf-9ab5-cb83d0f372f7 · outbound

This paper cites K-means clustering: a half-century synthesis,.

GeneSUM: Large Language Model-based Gene Summary Extraction K-means clustering: a half-century synthesis,

Reference 17

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:38.906204Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation fc2ad549-8a76-473a-a320-0a1ffde5df49 · outbound

This paper cites Unsupervised k-means clustering algo- rithm,.

GeneSUM: Large Language Model-based Gene Summary Extraction Unsupervised k-means clustering algo- rithm,

Reference 18

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:38.894670Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation f1a38619-ea41-4ac4-8106-98cdd013dab1 · outbound

This paper cites Semantic cosine similar- ity,.

GeneSUM: Large Language Model-based Gene Summary Extraction Semantic cosine similar- ity,

Reference 19

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:38.882158Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation a1f1d546-bac7-46ec-9d07-8c268af6e655 · outbound

This paper cites Learning similarity with cosine similarity ensemble,.

GeneSUM: Large Language Model-based Gene Summary Extraction Learning similarity with cosine similarity ensemble,

Reference 20

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:38.869529Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation fcdae452-3700-4ad4-b27f-ce18f298a619 · outbound

This paper cites LoRA: Low-Rank Adaptation of Large Language Models.

GeneSUM: Large Language Model-based Gene Summary Extraction LoRA: Low-Rank Adaptation of Large Language Models

Reference 21

Resolution: unresolved; no resolver link, observed 2026-08-11T05:01:38.559858Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 0876fbc6-c70c-42c2-9029-680c788f414b · outbound

This paper cites Per- formance analysis of lora finetuning llama-2,.

GeneSUM: Large Language Model-based Gene Summary Extraction Per- formance analysis of lora finetuning llama-2,

Reference 22

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:38.857306Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 41b9c7dd-2dce-486c-b10c-f6b4f4dba6b3 · outbound

This paper cites Rouge: A package for automatic evaluation of summaries,.

GeneSUM: Large Language Model-based Gene Summary Extraction Rouge: A package for automatic evaluation of summaries,

Reference 23

Resolution: unresolved; no resolver link, observed 2026-08-11T05:01:38.567468Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation c8179bda-1d54-4106-94af-23549daaa1a5 · outbound

This paper cites Gpt-3: Its nature, scope, limits, and consequences,.

GeneSUM: Large Language Model-based Gene Summary Extraction Gpt-3: Its nature, scope, limits, and consequences,

Reference 24

Resolution: unresolved; no resolver link, observed 2026-08-11T05:01:38.571179Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation f29647dc-d0ee-4607-872d-2aade5805c5f · outbound

This paper cites CancerLLM: A Large Language Model in Cancer Domain.

GeneSUM: Large Language Model-based Gene Summary Extraction CancerLLM: A Large Language Model in Cancer Domain

Reference 25

Resolution: unresolved; no resolver link, observed 2026-08-11T05:01:38.574733Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 66dd4f3a-f758-4685-a376-451c091ee36f · outbound

This paper cites BioMistral: A Collection of Open-Source Pretrained Large Language Models for Medical Domains.

GeneSUM: Large Language Model-based Gene Summary Extraction BioMistral: A Collection of Open-Source Pretrained Large Language Models for Medical Domains

Reference 26

Resolution: unresolved; no resolver link, observed 2026-08-11T05:01:38.578605Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 48ce6c21-e519-4c92-a0cc-1d7d41b4e10f · outbound

This paper cites BERT: Pre-training of Deep Bidirectional Transformers for Language Understanding.

GeneSUM: Large Language Model-based Gene Summary Extraction BERT: Pre-training of Deep Bidirectional Transformers for Language Understanding

Reference 27

Resolution: unresolved; no resolver link, observed 2026-08-11T05:01:38.582657Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 92774aa8-b75f-4bf4-a8ca-2f0c88cd2d86 · outbound

This paper cites Generating gene summaries from biomedical literature: A study of semi-structured summarization,.

GeneSUM: Large Language Model-based Gene Summary Extraction Generating gene summaries from biomedical literature: A study of semi-structured summarization,

Reference 28

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:38.830464Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation a96ca0c1-d09e-4a98-a9c6-66279a9f98e8 · outbound

This paper cites BottleSum: Unsupervised and Self-supervised Sentence Summarization using the Information Bottleneck Principle.

GeneSUM: Large Language Model-based Gene Summary Extraction BottleSum: Unsupervised and Self-supervised Sentence Summarization using the Information Bottleneck Principle

Reference 29

Resolution: unresolved; no resolver link, observed 2026-08-11T05:01:38.590469Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation cac0d258-7a5b-489b-8ac8-ea8e5f66ddc4 · outbound

This paper cites Needed: Introducing hierarchical transformer to eye diseases diagnosis,.

GeneSUM: Large Language Model-based Gene Summary Extraction Needed: Introducing hierarchical transformer to eye diseases diagnosis,

Reference 30

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:38.818619Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 5cd8f653-c5eb-4ded-a188-34ae5cf4705d · outbound

This paper cites A Continued Pretrained LLM Approach for Automatic Medical Note Generation.

GeneSUM: Large Language Model-based Gene Summary Extraction A Continued Pretrained LLM Approach for Automatic Medical Note Generation

Reference 31

Resolution: unresolved; no resolver link, observed 2026-08-11T05:01:38.597954Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation dbb9ca8a-c25e-434d-8212-eec591662a25 · outbound

This paper cites BioRAG: A RAG-LLM Framework for Biological Question Reasoning.

GeneSUM: Large Language Model-based Gene Summary Extraction BioRAG: A RAG-LLM Framework for Biological Question Reasoning

Reference 32

Resolution: unresolved; no resolver link, observed 2026-08-11T05:01:38.601919Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 0b8b6d11-d307-43eb-844f-40f27415f192 · outbound

This paper cites scInterpreter: Training Large Language Models to Interpret scRNA-seq Data for Cell Type Annotation.

GeneSUM: Large Language Model-based Gene Summary Extraction scInterpreter: Training Large Language Models to Interpret scRNA-seq Data for Cell Type Annotation

Reference 33

Resolution: unresolved; no resolver link, observed 2026-08-11T05:01:38.605724Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 3e972386-e3c0-4631-b873-c4608dd9fc0c · outbound

This paper cites Resolving the imbalance issue in hierarchical disciplinary topic inference via llm-based data augmentation,.

GeneSUM: Large Language Model-based Gene Summary Extraction Resolving the imbalance issue in hierarchical disciplinary topic inference via llm-based data augmentation,

Reference 34

Resolution: verified fuzzy; raw_fallback, observed 2026-08-11T05:01:38.805534Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation d7bc62e1-bc98-4c63-9c0b-aee775df6435 · outbound

This paper cites What Makes Good In-Context Examples for GPT-$3$?.

GeneSUM: Large Language Model-based Gene Summary Extraction What Makes Good In-Context Examples for GPT-$3$?

Reference 35

Resolution: unresolved; no resolver link, observed 2026-08-11T05:01:38.613088Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation bdb5ce84-be2a-47e0-81b0-e6c40930d09e · outbound

This paper cites Enhanced Gene Selection in Single-Cell Genomics: Pre-Filtering Synergy and Reinforced Optimization.

GeneSUM: Large Language Model-based Gene Summary Extraction Enhanced Gene Selection in Single-Cell Genomics: Pre-Filtering Synergy and Reinforced Optimization

Reference 36

Resolution: verified exact; local_arxiv, observed 2026-08-11T05:01:38.655170Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Pith citing papers

No inbound Pith citation observations are available.