An All-Atom Generative Model for Designing Protein Complexes | Paper Citation Record

Observation d834a303-8a1b-4114-80a6-1d412df46ed8 · outbound

This paper cites write newline.

An All-Atom Generative Model for Designing Protein Complexes write newline

Reference 1

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Observation 24930eb0-137b-4002-b64e-5c9c07a949fc · outbound

This paper cites J., Bambrick, J., et al.

An All-Atom Generative Model for Designing Protein Complexes J., Bambrick, J., et al

Reference 2

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This paper cites D., Hu, X., Adachi, Y., Schief, W.

An All-Atom Generative Model for Designing Protein Complexes D., Hu, X., Adachi, Y., Schief, W

Reference 3

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This paper cites X., Fusi, N., Amini, A.

An All-Atom Generative Model for Designing Protein Complexes X., Fusi, N., Amini, A

Reference 4

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Observation e7acef7a-ad1a-469b-aea7-ed1671a2be9b · outbound

This paper cites F., Leaver-Fay, A., Jeliazkov, J.

An All-Atom Generative Model for Designing Protein Complexes F., Leaver-Fay, A., Jeliazkov, J

Reference 5

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This paper cites R., Wang, J., Cong, Q., Kinch, L.

An All-Atom Generative Model for Designing Protein Complexes R., Wang, J., Cong, Q., Kinch, L

Reference 6

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Observation f32d956c-d9e1-494f-b47b-9fb501884a9e · outbound

This paper cites and Wallner, B.

An All-Atom Generative Model for Designing Protein Complexes and Wallner, B

Reference 7

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Observation 2f6c329f-a5cf-4a82-8ebe-cbaee72978ab · outbound

This paper cites R., Watson, J.

An All-Atom Generative Model for Designing Protein Complexes R., Watson, J

Reference 8

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This paper cites M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T.

An All-Atom Generative Model for Designing Protein Complexes M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T

Reference 9

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Observation a0270900-0423-47f2-80a4-3df4cd0a42ed · outbound

This paper cites J., Michoud, K., O'Donovan, C., Phan, I., et al.

An All-Atom Generative Model for Designing Protein Complexes J., Michoud, K., O'Donovan, C., Phan, I., et al

Reference 10

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:23.075273Z

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Observation f8cae85b-895e-4757-81ec-f3e038da6bf0 · outbound

This paper cites C., Korablyov, M., Bronstein, M.

An All-Atom Generative Model for Designing Protein Complexes C., Korablyov, M., Bronstein, M

Reference 11

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Observation 0ca65fed-8fa4-4c3f-9ae4-a3c9d28f45b5 · outbound

This paper cites Generative flows on discrete state-spaces: Enabling multimodal flows with applications to protein co-design.

An All-Atom Generative Model for Designing Protein Complexes Generative flows on discrete state-spaces: Enabling multimodal flows with applications to protein co-design

Reference 12

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This paper cites an unresolved cited work.

An All-Atom Generative Model for Designing Protein Complexes Unresolved cited work

Reference 13

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This paper cites an unresolved cited work.

An All-Atom Generative Model for Designing Protein Complexes Unresolved cited work

Reference 14

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This paper cites E., Kim, J., Cheng, L., El Nesr, G., Xu, M., Shuai, R.

An All-Atom Generative Model for Designing Protein Complexes E., Kim, J., Cheng, L., El Nesr, G., Xu, M., Shuai, R

Reference 15

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This paper cites E., Kim, J., Cheng, L., El Nesr, G., Xu, M., Shuai, R.

An All-Atom Generative Model for Designing Protein Complexes E., Kim, J., Cheng, L., El Nesr, G., Xu, M., Shuai, R

Reference 16

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Observation d2abba4d-17ec-43c3-a184-c9f74f2e11d5 · outbound

This paper cites Y., Ermon, S., Rudra, A., and R \'e , C.

An All-Atom Generative Model for Designing Protein Complexes Y., Ermon, S., Rudra, A., and R \'e , C

Reference 17

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This paper cites J., Milles, L.

An All-Atom Generative Model for Designing Protein Complexes J., Milles, L

Reference 18

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This paper cites an unresolved cited work.

An All-Atom Generative Model for Designing Protein Complexes Unresolved cited work

Reference 19

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This paper cites D., McGibbon, R.

An All-Atom Generative Model for Designing Protein Complexes D., McGibbon, R

Reference 20

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Observation d3176ba3-343a-4cd8-9f2d-48f96fa04650 · outbound

This paper cites and Huber, R.

An All-Atom Generative Model for Designing Protein Complexes and Huber, R

Reference 21

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Observation c6285b66-dce4-4b6f-834c-9ce7f9b31076 · outbound

This paper cites Protein complex prediction with alphafold-multimer.

An All-Atom Generative Model for Designing Protein Complexes Protein complex prediction with alphafold-multimer

Reference 22

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.943054Z

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This paper cites an unresolved cited work.

An All-Atom Generative Model for Designing Protein Complexes Unresolved cited work

Reference 23

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This paper cites Pre-training antibody language models for antigen-specific computational antibody design.

An All-Atom Generative Model for Designing Protein Complexes Pre-training antibody language models for antigen-specific computational antibody design

Reference 24

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.918314Z

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This paper cites Alphafold2 models indicate that protein sequence determines both structure and dynamics.

An All-Atom Generative Model for Designing Protein Complexes Alphafold2 models indicate that protein sequence determines both structure and dynamics

Reference 25

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.905417Z

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Observation aff6449c-8452-458e-afc9-1d05c9438c08 · outbound

This paper cites J., Oktay, D., Lin, Z., Verkuil, R., Tran, V.

An All-Atom Generative Model for Designing Protein Complexes J., Oktay, D., Lin, Z., Verkuil, R., Tran, V

Reference 26

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This paper cites and Henikoff, J.

An All-Atom Generative Model for Designing Protein Complexes and Henikoff, J

Reference 27

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.885390Z

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Observation 8f61b6fc-c28f-409d-b620-6eb75942cfdb · outbound

This paper cites Elucidating the Design Space of Multimodal Protein Language Models.

An All-Atom Generative Model for Designing Protein Complexes Elucidating the Design Space of Multimodal Protein Language Models

Reference 28

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Observation c36825bd-3d67-4456-a604-fe16b41521aa · outbound

This paper cites Learning inverse folding from millions of predicted structures.

An All-Atom Generative Model for Designing Protein Complexes Learning inverse folding from millions of predicted structures

Reference 29

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.872813Z

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Observation c693f6df-9953-4b73-92bd-3d427a5b48f0 · outbound

This paper cites Sequence-augmented se (3)-flow matching for conditional protein backbone generation.

An All-Atom Generative Model for Designing Protein Complexes Sequence-augmented se (3)-flow matching for conditional protein backbone generation

Reference 30

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:21.829338Z

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Observation 36a34a9b-747c-4a33-99f1-de9da1595024 · outbound

This paper cites B., Baranov, M., Costello, Z., Barber, K.

An All-Atom Generative Model for Designing Protein Complexes B., Baranov, M., Costello, Z., Barber, K

Reference 31

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:21.833242Z

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Observation ed7de4bd-6208-4c7e-8138-4a1250b1afda · outbound

This paper cites Antibody-antigen docking and design via hierarchical structure refinement.

An All-Atom Generative Model for Designing Protein Complexes Antibody-antigen docking and design via hierarchical structure refinement

Reference 32

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.851162Z

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Observation c1cff4d5-1064-4211-a9cf-2bd84024086c · outbound

This paper cites Highly accurate protein structure prediction with alphafold.

An All-Atom Generative Model for Designing Protein Complexes Highly accurate protein structure prediction with alphafold

Reference 33

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:21.841441Z

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Observation e14520bc-a3e4-4425-b0dc-0a61ae37a9ef · outbound

This paper cites Conditional antibody design as 3d equivariant graph translation.

An All-Atom Generative Model for Designing Protein Complexes Conditional antibody design as 3d equivariant graph translation

Reference 34

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.831861Z

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Observation 75bafd49-09ff-4d79-b5a2-2ea42f6d4a9b · outbound

This paper cites End-to-end full-atom antibody design.

An All-Atom Generative Model for Designing Protein Complexes End-to-end full-atom antibody design

Reference 35

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.819069Z

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No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation c75f91ea-f8c9-463d-b44a-1afb36fd9753 · outbound

This paper cites Full-atom peptide design with geometric latent diffusion.

An All-Atom Generative Model for Designing Protein Complexes Full-atom peptide design with geometric latent diffusion

Reference 36

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.806970Z

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Observation 9036cecb-b1ba-4572-a2db-1e8bb0e4b905 · outbound

This paper cites R., Morey-Burrows, F.

An All-Atom Generative Model for Designing Protein Complexes R., Morey-Burrows, F

Reference 37

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:21.857133Z

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Observation 5c9c4f4c-6427-421c-b17e-8b41fb5d59a2 · outbound

This paper cites Imgt unique numbering for immunoglobulin and t cell receptor variable domains and ig superfamily v-like domains.

An All-Atom Generative Model for Designing Protein Complexes Imgt unique numbering for immunoglobulin and t cell receptor variable domains and ig superfamily v-like domains

Reference 38

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.785840Z

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Observation 478767fd-5b1e-47b2-bc0a-b110496cc680 · outbound

This paper cites L., Nelson, D.

An All-Atom Generative Model for Designing Protein Complexes L., Nelson, D

Reference 39

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.774229Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation f8acf672-3fc7-4c2b-94c9-7b7742bc0eda · outbound

This paper cites Full-atom peptide design based on multi-modal flow matching.

An All-Atom Generative Model for Designing Protein Complexes Full-atom peptide design based on multi-modal flow matching

Reference 40

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.761998Z

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No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation e31bfab7-14ba-41a5-b449-b4fe40a73843 · outbound

This paper cites an unresolved cited work.

An All-Atom Generative Model for Designing Protein Complexes Unresolved cited work

Reference 41

Resolution: unresolved; raw_fallback, observed 2026-08-16T12:20:22.749413Z

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Observation bc9a852a-ade0-4343-adec-efd3298aad2d · outbound

This paper cites Evolutionary-scale prediction of atomic-level protein structure with a language model.

An All-Atom Generative Model for Designing Protein Complexes Evolutionary-scale prediction of atomic-level protein structure with a language model

Reference 42

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.736855Z

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No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation c471ee81-5276-43ad-935a-656efbf889b9 · outbound

This paper cites T., Ben-Hamu, H., Nickel, M., and Le, M.

An All-Atom Generative Model for Designing Protein Complexes T., Ben-Hamu, H., Nickel, M., and Le, M

Reference 43

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:21.879712Z

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This paper cites L., Gershon, J.

An All-Atom Generative Model for Designing Protein Complexes L., Gershon, J

Reference 44

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.716674Z

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No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation 149d5638-2fbe-462e-b002-eb134bbba3fb · outbound

This paper cites Antigen-specific antibody design and optimization with diffusion-based generative models for protein structures.

An All-Atom Generative Model for Designing Protein Complexes Antigen-specific antibody design and optimization with diffusion-based generative models for protein structures

Reference 45

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.703700Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation e37b2d0b-37af-4ea3-8862-68bfefa54813 · outbound

This paper cites ProGen: Language Modeling for Protein Generation.

An All-Atom Generative Model for Designing Protein Complexes ProGen: Language Modeling for Protein Generation

Reference 46

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:21.890895Z

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Observation f46cd620-466d-4c29-83c4-b2b28a4f558e · outbound

This paper cites lddt: a local superposition-free score for comparing protein structures and models using distance difference tests.

An All-Atom Generative Model for Designing Protein Complexes lddt: a local superposition-free score for comparing protein structures and models using distance difference tests

Reference 47

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.690997Z

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Observation df497c3d-a924-485e-9332-a8d64e86c822 · outbound

This paper cites Abdiffuser: full-atom generation of in-vitro functioning antibodies.

An All-Atom Generative Model for Designing Protein Complexes Abdiffuser: full-atom generation of in-vitro functioning antibodies

Reference 48

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.679766Z

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Observation adb8074a-7a4b-4b1e-aee8-ae82a11599dc · outbound

This paper cites and Xu, J.

An All-Atom Generative Model for Designing Protein Complexes and Xu, J

Reference 49

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.667657Z

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No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation c8fa3b80-95f1-4dfc-a3a4-a0e1fabfeeb4 · outbound

This paper cites C., Goddard, T.

An All-Atom Generative Model for Designing Protein Complexes C., Goddard, T

Reference 50

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.655886Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation f0701410-2c4f-49ce-ae15-65f4c4058325 · outbound

This paper cites and Wallner, B.

An All-Atom Generative Model for Designing Protein Complexes and Wallner, B

Reference 51

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.644569Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation e7a11eef-189d-4277-a353-449c0645ef44 · outbound

This paper cites A., Weinstein, E.

An All-Atom Generative Model for Designing Protein Complexes A., Weinstein, E

Reference 52

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:21.918125Z

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Observation f9a7b5f2-c791-4403-978e-013188f89c08 · outbound

This paper cites Machine learning for functional protein design.

An All-Atom Generative Model for Designing Protein Complexes Machine learning for functional protein design

Reference 53

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.625549Z

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No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation fb131938-859c-4290-839f-be890fbaf92a · outbound

This paper cites P (all-atom) is unlocking new path for protein design.

An All-Atom Generative Model for Designing Protein Complexes P (all-atom) is unlocking new path for protein design

Reference 54

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.613059Z

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No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation 87cae816-e6e3-4041-8c70-f886e15e4347 · outbound

This paper cites D., Ermon, S., and Finn, C.

An All-Atom Generative Model for Designing Protein Complexes D., Ermon, S., and Finn, C

Reference 55

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:21.929357Z

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Observation f63d72f6-ab11-49b2-8538-44d58eb933b5 · outbound

This paper cites L., Ma, J., and Fergus, R.

An All-Atom Generative Model for Designing Protein Complexes L., Ma, J., and Fergus, R

Reference 56

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:21.933019Z

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Observation 4eb6f4e0-b718-452e-a8c1-f3be73471f91 · outbound

This paper cites W., Prli \'c , A., Altunkaya, A., Bi, C., Bradley, A.

An All-Atom Generative Model for Designing Protein Complexes W., Prli \'c , A., Altunkaya, A., Bi, C., Bradley, A

Reference 57

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.593516Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation ac51e862-731e-40bb-8746-f030f512d2b7 · outbound

This paper cites K., Koča, J., and Rose, A.

An All-Atom Generative Model for Designing Protein Complexes K., Koča, J., and Rose, A

Reference 58

Resolution: verified exact; doi, observed 2026-08-16T12:20:22.098458Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation 154ea356-e355-4351-a2a5-09f1cf7bdd2b · outbound

This paper cites W., Evans, R., Jumper, J., Kirkpatrick, J., Sifre, L., Green, T., Qin, C., Z \' dek, A., Nelson, A.

An All-Atom Generative Model for Designing Protein Complexes W., Evans, R., Jumper, J., Kirkpatrick, J., Sifre, L., Green, T., Qin, C., Z \' dek, A., Nelson, A

Reference 59

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:21.945231Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 4fbc4c28-2608-4798-8e24-9d0ece226cf2 · outbound

This paper cites Protein sequence and structure co-design with equivariant translation.

An All-Atom Generative Model for Designing Protein Complexes Protein sequence and structure co-design with equivariant translation

Reference 60

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.573900Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation ae84bcf6-b2f4-4827-92df-cbc64841ecc4 · outbound

This paper cites and Dhariwal, P.

An All-Atom Generative Model for Designing Protein Complexes and Dhariwal, P

Reference 61

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.562193Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation 3db93d61-36b0-4efa-a0a0-fb96833c3bfa · outbound

This paper cites Generative enzyme design guided by functionally important sites and small-molecule substrates.

An All-Atom Generative Model for Designing Protein Complexes Generative enzyme design guided by functionally important sites and small-molecule substrates

Reference 62

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:21.957519Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation b00fc432-ed09-4139-96de-f4cd654dec0f · outbound

This paper cites and S \"o ding, J.

An All-Atom Generative Model for Designing Protein Complexes and S \"o ding, J

Reference 63

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.550768Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation 3ea07f66-217a-42a9-a1bb-7cc2c76481dd · outbound

This paper cites Saprot: Protein language modeling with structure-aware vocabulary.

An All-Atom Generative Model for Designing Protein Complexes Saprot: Protein language modeling with structure-aware vocabulary

Reference 64

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.539434Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation 730c3b6d-c895-4971-aebb-13205049de8c · outbound

This paper cites Saprothub: Making protein modeling accessible to all biologists.

An All-Atom Generative Model for Designing Protein Complexes Saprothub: Making protein modeling accessible to all biologists

Reference 65

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.525119Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation e0f17e4e-694f-404d-8263-eac375abca10 · outbound

This paper cites Protrek: Navigating the protein universe through tri-modal contrastive learning.

An All-Atom Generative Model for Designing Protein Complexes Protrek: Navigating the protein universe through tri-modal contrastive learning

Reference 66

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.510161Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation 4cd09492-75c6-4354-b871-cb7a0cecc663 · outbound

This paper cites Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem.

An All-Atom Generative Model for Designing Protein Complexes Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem

Reference 67

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:21.976189Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation ad1d70d0-1b9c-4005-9465-bb085329e86a · outbound

This paper cites K., Avraham, O., Ben-Aharon, Z., Khramushin, A., and Schueler-Furman, O.

An All-Atom Generative Model for Designing Protein Complexes K., Avraham, O., Ben-Aharon, Z., Khramushin, A., and Schueler-Furman, O

Reference 68

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.495759Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation b9681234-8b64-47c4-a60f-c4f513da47b2 · outbound

This paper cites Alphafold protein structure database: massively expanding the structural coverage of protein-sequence space with high-accuracy models.

An All-Atom Generative Model for Designing Protein Complexes Alphafold protein structure database: massively expanding the structural coverage of protein-sequence space with high-accuracy models

Reference 69

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.480416Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation 968655f6-89fe-4b21-8265-2c6f96b0381d · outbound

This paper cites Diffusion model alignment using direct preference optimization.

An All-Atom Generative Model for Designing Protein Complexes Diffusion model alignment using direct preference optimization

Reference 70

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.466050Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation 1133ef80-1b2e-4fa7-8136-b4b19cc89ce8 · outbound

This paper cites Diffusion language models are versatile protein learners.

An All-Atom Generative Model for Designing Protein Complexes Diffusion language models are versatile protein learners

Reference 71

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.452812Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation 247d6e66-af45-47c3-a45a-bdef944483cb · outbound

This paper cites DPLM-2: A Multimodal Diffusion Protein Language Model.

An All-Atom Generative Model for Designing Protein Complexes DPLM-2: A Multimodal Diffusion Protein Language Model

Reference 72

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:21.996683Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 99eb145e-b48d-456c-95de-a24ef286b9ed · outbound

This paper cites L., Juergens, D., Bennett, N.

An All-Atom Generative Model for Designing Protein Complexes L., Juergens, D., Bennett, N

Reference 73

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:22.000814Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 443cdd2e-c0bc-4575-9335-971b6d6fc998 · outbound

This paper cites Boltz-1: Democratizing biomolecular interaction modeling.

An All-Atom Generative Model for Designing Protein Complexes Boltz-1: Democratizing biomolecular interaction modeling

Reference 74

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.429364Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation 2ef20dde-6c2b-4b01-a7a3-4e4e16f9720b · outbound

This paper cites and Li, S.

An All-Atom Generative Model for Designing Protein Complexes and Li, S

Reference 75

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.415078Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation ee47a073-a97f-4228-975c-4fa703efd5ee · outbound

This paper cites and Zhang, Y.

An All-Atom Generative Model for Designing Protein Complexes and Zhang, Y

Reference 76

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.402023Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation 58cb2d48-c4d4-498f-8a19-215b9be8ae8d · outbound

This paper cites ProteinBench: A Holistic Evaluation of Protein Foundation Models.

An All-Atom Generative Model for Designing Protein Complexes ProteinBench: A Holistic Evaluation of Protein Foundation Models

Reference 77

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:22.016881Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 905a9bfc-7891-4bb0-8a49-3e22e9209cb7 · outbound

This paper cites Fast protein backbone generation with SE(3) flow matching.

An All-Atom Generative Model for Designing Protein Complexes Fast protein backbone generation with SE(3) flow matching

Reference 79

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:22.026880Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 992893e2-c551-46e1-a701-624b962d4dd0 · outbound

This paper cites an unresolved cited work.

An All-Atom Generative Model for Designing Protein Complexes Unresolved cited work

Reference 80

Resolution: unresolved; raw_fallback, observed 2026-08-16T12:20:22.390383Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation 7c245e1a-1056-4a85-be00-833dbae11b7a · outbound

This paper cites De novo design of high-affinity protein binders with AlphaProteo.

An All-Atom Generative Model for Designing Protein Complexes De novo design of high-affinity protein binders with AlphaProteo

Reference 81

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:22.034498Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 87fc071f-7222-4760-a6ce-de012ed50b72 · outbound

This paper cites and Skolnick, J.

An All-Atom Generative Model for Designing Protein Complexes and Skolnick, J

Reference 82

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.378351Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation f2e56570-8fc9-4e5b-8730-44712669dd8e · outbound

This paper cites and Skolnick, J.

An All-Atom Generative Model for Designing Protein Complexes and Skolnick, J

Reference 83

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.366006Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation a0cac0b7-9507-4a4b-adb5-20d5c755d969 · outbound

This paper cites Diffpack: A torsional diffusion model for autoregressive protein side-chain packing.

An All-Atom Generative Model for Designing Protein Complexes Diffpack: A torsional diffusion model for autoregressive protein side-chain packing

Reference 84

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.350452Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation f3859829-91b4-47bd-969e-07dc838f8a6c · outbound

This paper cites Structure-informed language models are protein designers.

An All-Atom Generative Model for Designing Protein Complexes Structure-informed language models are protein designers

Reference 85

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:22.050512Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 687c4db9-aede-4c1a-9c44-1f1f2352f414 · outbound

This paper cites Antigen-specific antibody design via direct energy-based preference optimization.

An All-Atom Generative Model for Designing Protein Complexes Antigen-specific antibody design via direct energy-based preference optimization

Reference 86

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.329421Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation d571746e-cb50-47df-a9dd-2a2ab71075c0 · outbound

This paper cites Designing cyclic peptides via harmonic sde with atom-bond modeling.

An All-Atom Generative Model for Designing Protein Complexes Designing cyclic peptides via harmonic sde with atom-bond modeling

Reference 87

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.313200Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation 17f8d915-7f20-4c14-90e3-ecf42a580615 · outbound

This paper cites Antibody design using a score-based diffusion model guided by evolutionary, physical and geometric constraints.

An All-Atom Generative Model for Designing Protein Complexes Antibody design using a score-based diffusion model guided by evolutionary, physical and geometric constraints

Reference 88

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T12:20:22.299311Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

Observation 8c03a18c-53a0-45a4-a18b-2f4da8eed8bf · outbound

This paper cites Linker-Tuning: Optimizing Continuous Prompts for Heterodimeric Protein Prediction.

An All-Atom Generative Model for Designing Protein Complexes Linker-Tuning: Optimizing Continuous Prompts for Heterodimeric Protein Prediction

Reference 89

Resolution: unresolved; no resolver link, observed 2026-08-16T12:20:22.065203Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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