Typed states for the displayed outbound observations.
Source: paper_references, paper_reference_links, observed 2026-08-15T17:52:52.737802Z
Paper Citation Record · LEDGER
As of 15 August 2026, this Paper Citation Record lists 100 of 103 outbound references and 1 inbound Pith citation observation for arXiv:2507.20122.
A citation records a reference. It does not transfer a finding from one paper to another.
Typed states for the displayed outbound observations.
Source: paper_references, paper_reference_links, observed 2026-08-15T17:52:52.737802Z
One-hop event checks from named stored sources.
Source: scholarly_work_events, retraction_status_cache, observed 2026-08-15T06:32:42.880941+00:00
Pith citing papers itemized under the disclosed page cap.
Source: paper_references, paper_reference_links, observed 2026-07-15T13:53:02.803305Z
A source-named dated measurement, never combined with another source.
Source: cited_works
100 of 103 outbound references displayed
External citation measurements
No source-named external measurement is stored.
Observation 37c14ca8-5fac-4c4c-9c31-c247e16b1bdf · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 1
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Observation 3aa0d3f6-7a84-49c6-a418-b2d28428d9e3 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Cohen-Boulakia, K
Reference 2
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Observation e43b161b-1db1-4e94-bab4-8f4b13d5576a · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics S¨ anger, N
Reference 3
Source-reported events for the cited work
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Observation 2094020a-1ab5-4bf4-8a1f-cb70829e5dd6 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Wratten, A
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Observation e64f90fa-6334-409e-95a5-4204ea94efe0 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Goodwin, J
Reference 5
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Observation ee8b05d1-e125-4ad6-a443-2ad0c3955dd8 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
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Observation 6b1527bb-4853-4a2e-81a4-6efb693d994b · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
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Observation 6143fdbb-577d-4e6e-9e1f-b0148bd3d8fa · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Goecks, A
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Observation dfe65ccd-915f-4a85-82f9-693d57ef9d13 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Di Tommaso, M
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Observation 0a390f24-fe27-4dfe-a8a2-a4bf87cf3b35 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics K¨ oster, S
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Observation b9cdfa4f-f19d-4a7b-955b-fd316d816854 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Harenslak, et al., Data pipelines with apache airflow, Simon and Schuster, 2021
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Observation 0f40040d-4737-4d2a-88fb-b0323fedc0e2 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Deelman, K
Reference 12
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Observation cc73a8d0-66cb-40f1-81e8-44e5c006a5b7 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Goodstadt, Ruffus: a lightweight python library for computational pipelines, Bioinfor- matics 26 (21) (2010) 2778–2779
Reference 13
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Observation 5b696a15-1aff-46bf-9054-8820f1fc2d06 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Khodak, B
Reference 14
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 788c7dfb-b7c0-4ee1-9b20-f0fe7e81082c · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Kumar, H
Reference 15
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 46170667-32b5-4acc-a344-e97c8d95fbfc · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 16
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 054eb5df-6730-49e3-8e1c-3757c9c5a00a · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Ferreira da Silva, D
Reference 17
Source-reported events for the cited work
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Observation 1a1d7ed2-087c-428e-9a6b-6c562c05c00c · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Menaka, K
Reference 18
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 0bed4e5a-5d22-4fed-b43d-afc1f536cc2d · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Deelman, T
Reference 19
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 0fa84b00-6ce8-4ffd-bb92-01acf03a1b4e · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 20
Source-reported events for the cited work
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Observation 3874d2f2-46dd-418f-be5c-6e7f2fe0f3b1 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics De Roure, C
Reference 21
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 7dd55696-cb57-4bde-ad3a-1707685ef65c · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Cohen-Boulakia, U
Reference 22
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 31d5cfed-e335-482a-8646-017cdf5531bb · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics GPT-4o System Card
Reference 23
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation f9b6ac9a-46aa-43c3-a953-546eb38ffb69 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Gemini 2.5: Pushing the Frontier with Advanced Reasoning, Multimodality, Long Context, and Next Generation Agentic Capabilities
Reference 24
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 4a97bfbd-1f4d-42b6-b182-cae159f9aafb · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics DeepSeek-V3 Technical Report
Reference 25
Source-reported events for the cited work
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Observation 3c032d82-af34-4d65-8be7-5c181400e7f9 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics An Empirical Study of the Non-determinism of ChatGPT in Code Generation
Reference 26
Source-reported events for the cited work
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Observation 0d7ab744-c430-4d6c-9b8b-75c8d03b3234 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 27
Source-reported events for the cited work
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Observation c8468289-b5dd-4062-9c05-d08ec39a1953 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Ekin, Prompt engineering for chatgpt: a quick guide to techniques, tips, and best practices, Authorea Preprints (2023)
Reference 28
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Observation aa4a1f1d-65ff-40d5-b700-7c0b637dac20 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Arora, A
Reference 29
Source-reported events for the cited work
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Observation 115fd476-c7ff-4729-9ce6-5c707e9787e5 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Reynolds, K
Reference 30
Source-reported events for the cited work
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Observation 1491c839-b1e8-4dba-aa12-c2128e8bfb45 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 31
Source-reported events for the cited work
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Observation d4c4cf39-9d88-4e7c-a0bb-b02c76df1770 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Large Language Models Are Human-Level Prompt Engineers
Reference 32
Source-reported events for the cited work
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Observation 98748bce-8cd0-4dde-a78c-90602d5da83c · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Marvin, N
Reference 33
Source-reported events for the cited work
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Observation b104b758-3a55-43f7-ab18-8ee65a8d4fd7 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Lin, How to write effective prompts for large language models, Nature Human Be- haviour 8 (4) (2024) 611–615
Reference 34
Source-reported events for the cited work
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Observation 3673d1ab-6438-4813-b89a-dee816f5b8a6 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Hiltemann, et al., Galaxy training: A powerful framework for teaching!, PLoS compu- tational biology 19 (1) (2023) e1010752
Reference 35
Source-reported events for the cited work
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Observation 131ba8fa-0016-4a16-916b-8c4a3ac09abe · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 36
Source-reported events for the cited work
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Observation 91e526c5-02bc-4462-945d-0542c3df9015 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Barker, J
Reference 37
Source-reported events for the cited work
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Observation d053fefb-dbd4-4fe0-9a6f-8da01f8fea50 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Lud¨ ascher, M
Reference 38
Source-reported events for the cited work
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Observation 26cebf2a-34c6-4552-b7d9-63b3ca16f1ac · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 39
Source-reported events for the cited work
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Observation ee614c23-a1df-4075-b0fb-214a90a95c3c · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 40
Source-reported events for the cited work
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Observation da3462f9-9854-409e-8e49-ad161f0c3fe0 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 41
Source-reported events for the cited work
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Observation 5957c80b-2e90-4198-a0fb-bada37371f6c · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Vaswani, Attention is all you need, Advances in Neural Information Processing Systems (2017)
Reference 42
Source-reported events for the cited work
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Observation 6fd8df88-4cc4-48e3-a325-8cd950939177 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics A Survey of Large Language Models
Reference 43
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Observation bedbabb2-0809-4c31-9158-7e11f627a0eb · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 44
Source-reported events for the cited work
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Observation 0c607a70-ecfa-4ef8-9d81-5ad5354609ef · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics An Insight into Security Code Review with LLMs: Capabilities, Obstacles, and Influential Factors
Reference 45
Source-reported events for the cited work
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Observation c6320c31-8e98-451d-98d8-6e33c4936d53 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 46
Source-reported events for the cited work
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Observation 358677b9-2354-433e-be9b-f6786f481604 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 47
Source-reported events for the cited work
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Observation 30dfe176-26f8-4aa0-b5c2-d5b1bf3bfb86 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Lost in Translation: A Study of Bugs Introduced by Large Language Models while Translating Code
Reference 48
Source-reported events for the cited work
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Observation 8d45bcaf-3b8e-4db0-8a6b-d3afb1f03ac3 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 49
Source-reported events for the cited work
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Observation 98b25b45-95ac-4983-a667-f5f93395270b · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 50
Source-reported events for the cited work
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Observation cc7991a1-562d-4552-bfaf-df0abd436384 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics SelfCheckGPT: Zero-Resource Black-Box Hallucination Detection for Generative Large Language Models
Reference 51
Source-reported events for the cited work
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Observation 0cd32c14-641f-485a-b7ec-f7f022b440ae · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Check Your Facts and Try Again: Improving Large Language Models with External Knowledge and Automated Feedback
Reference 52
Source-reported events for the cited work
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Observation ff91266b-9847-45db-8962-c8e07eb3e92f · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Ugare, et al., Improving llm code generation with grammar augmentation, arXiv e- prints (2024) arXiv–2403
Reference 53
Source-reported events for the cited work
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Observation dfc756c9-a7b8-4357-9204-77979253f3eb · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Gu, Llm-based code generation method for golang compiler testing, in: Proceedings of the 31st ACM Joint European Software Engineering Conference and Symposium on the FSE, 2023, pp
Reference 54
Source-reported events for the cited work
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Observation 8c8fcb67-2e34-4ea2-9bdc-c981bbb77fec · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 55
Source-reported events for the cited work
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Observation 0f600ab7-cb6d-42f1-9066-37f6c765e35e · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Jiang, E
Reference 56
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.
Observation 61d57ee2-3dd1-473a-a251-6cb78c77ed85 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Vaithilingam, et al., Expectation vs
Reference 57
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.
Observation db2bd706-8e68-41f5-bb91-4fd40009a33a · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Evaluating the Code Quality of AI-Assisted Code Generation Tools: An Empirical Study on GitHub Copilot, Amazon CodeWhisperer, and ChatGPT
Reference 58
Source-reported events for the cited work
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Observation 68ba5c99-97e0-4f83-b010-81e134bf7708 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Kazemitabaar, J
Reference 59
Source-reported events for the cited work
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Observation 43419545-e053-4b7f-b784-d6c2dd584eeb · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics what it wants me to say
Reference 60
Source-reported events for the cited work
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Observation 7752cfeb-0956-45db-a8c2-ac36fd894234 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 61
Source-reported events for the cited work
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Observation 00f31cb7-6804-4862-8259-e333c0761a40 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Brandes, D
Reference 62
Source-reported events for the cited work
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Observation 2134e2fb-7dfe-4833-8842-328c3873b9c2 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics DNAGPT: A Generalized Pre-trained Tool for Versatile DNA Sequence Analysis Tasks
Reference 63
Source-reported events for the cited work
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Observation 8ef5e8db-cfc4-40b8-8378-969bbc2f2d02 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Ferruz, S
Reference 64
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.
Observation 7aec8edf-c704-468e-b50f-c9fdf9c5f178 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Oppenlaender, A taxonomy of prompt modifiers for text-to-image generation, Be- haviour & Information Technology (2023) 1–14
Reference 65
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.
Observation dd0d59cf-7a5a-4988-a349-832f9854bcc2 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics A Prompt Pattern Catalog to Enhance Prompt Engineering with ChatGPT
Reference 66
Source-reported events for the cited work
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Observation 3120e8f8-50f9-4ba4-8f2a-68540c8c1c6c · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Jailbreaking ChatGPT via Prompt Engineering: An Empirical Study
Reference 67
Source-reported events for the cited work
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Observation 9b275eea-a464-4124-8cc4-2e2db8625a8d · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 68
Source-reported events for the cited work
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Observation 97d1a3a0-835e-4e9c-9d9e-612d77285e1e · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics A Systematic Survey of Prompt Engineering in Large Language Models: Techniques and Applications
Reference 69
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation efaac122-da3e-4583-a962-40f6e11a9e7c · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unleashing the potential of prompt engineering for large language models
Reference 70
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 4a5388aa-3958-4849-87be-966b943b300a · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Revisiting Prompt Engineering via Declarative Crowdsourcing
Reference 71
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation c68d5f4d-b04c-45ca-b5d7-08151b64ca09 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics A Survey of Prompt Engineering Methods in Large Language Models for Different NLP Tasks
Reference 72
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 0b0cf264-8650-45b2-93dd-1e6ee636dfb2 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Shah, From prompt engineering to prompt science with humans in the loop, Commu- nications of the ACM 68 (6) (2025) 54–61
Reference 73
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.
Observation 82b25295-3765-4ffa-a646-ea307d2cb6db · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Smith, J
Reference 74
Source-reported events for the cited work
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Observation 96681c34-39ec-4f52-b394-d883c30003d2 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 75
Source-reported events for the cited work
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Observation 27b1973b-a970-44d6-a5eb-3724b55d5cc2 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Progressive Prompts: Continual Learning for Language Models
Reference 76
Source-reported events for the cited work
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Observation ba292b82-ae7d-4227-98a5-62133d0923d8 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Knoth, A
Reference 77
Source-reported events for the cited work
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Observation c52ea686-9f58-486a-9e10-0dea137b1fee · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 78
Source-reported events for the cited work
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Observation a8164a85-afcf-455f-8c21-a7ae3c8d4ed5 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Unresolved cited work
Reference 79
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-15T06:32:42.880941+00:00.
Observation 30b4fab0-2785-488b-b841-367a59684942 · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Hiltemann, H
Reference 80
Source-reported events for the cited work
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Observation 8e0df1c8-9688-4a84-98ad-daec2ef4539b · outbound
From Prompt to Pipeline: Large Language Models for Scientific Workflow Development in Bioinformatics Hiltemann, et al., Galaxy basics for genomics (2024)
Reference 81
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