Pith. sign in

Paper Citation Record · LEDGER

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction

As of 10 August 2026, this Paper Citation Record lists 98 of 98 outbound references and 0 inbound Pith citation observations for arXiv:2608.06253.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2608.06253 v1

Coverage vector

measured 98 of 98 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-07T11:27:40.866594Z

measured 98 of 98 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-10T06:31:04.303077+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

98 of 98 outbound references displayed

  • verified exact2
  • verified fuzzy22
  • unresolved73
  • parse uncertain0
  • malformed identifier1
  • metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 9a114c7e-0107-4979-bbbc-71d3fc239ce1 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 1

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:32.021662Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:32.021662Z digest=sha256:fa4755d78afbdd3da9761c136e60f2844d85aa6dee48c6723e7316b8a0cf1b5d

Observation 5b9c8fbd-e4e1-4a1d-94d6-bbb5247749d3 · outbound

This paper cites J., Yanes, O.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction J., Yanes, O

Reference 2

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:32.097253Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:32.097253Z digest=sha256:56e6b250dea28fbfa5197a4b7ab319dc700c30e67d6b465480a5c84b4783ba24

Observation 16367ca2-0af4-4c06-b751-18071760ba85 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 3

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:32.210064Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:32.210064Z digest=sha256:6d8f020399cafe52d936c7cdafd875be1d197fe00bfb7ac4114975cf6db6628a

Observation faa6457e-5bba-4028-90c3-96e3545815a8 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 4

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:32.218141Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:32.218141Z digest=sha256:d66183b85a28a997bd123b8b90eb2e6392c2f900fd78ba6c204cc17eb80839a8

Observation b0d20afc-bfe7-4ec6-a1d6-612385c585ad · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 5

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:32.258633Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:32.258633Z digest=sha256:32e5c35a89f75f691cb698a248f7014dff94e605ac1bbcf06fc6300bd3587fef

Observation f17cd3bb-b6c9-42ee-9b73-7c275b0a4bea · outbound

This paper cites H., Ivanisevic, J.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction H., Ivanisevic, J

Reference 6

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:32.324401Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:32.324401Z digest=sha256:65f337fb62f3ed160c867e59b14c3b78fee010600a1aa56a10c35f310e88586c

Observation f0bb4442-da34-49a5-8e1a-a93ac4922b62 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 7

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:32.416907Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:32.416907Z digest=sha256:3561c106066ad6eb6316877bafc52a39467a4755075a98c3cc9971607610592e

Observation 2b3ee7be-3782-4f15-bd39-d13f1d3766b9 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 8

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:32.479083Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:32.479083Z digest=sha256:ff8406d0f1815878609526e8bdafd15c389773cd7ea11bedc74e780e933ef380

Observation 1a23bb8e-70fe-4710-be2f-67e4d8b318ce · outbound

This paper cites R., Warth, B., Spilker, M.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction R., Warth, B., Spilker, M

Reference 9

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:32.552267Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:32.552267Z digest=sha256:780be5b64329f40bcb4bf4f5010b6247d3e6cd6cb52e00bc0aa70e40b6282255

Observation 39f01410-8c2a-439b-b317-d574295916ed · outbound

This paper cites M., Ivanisevic, J., Giera, M.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction M., Ivanisevic, J., Giera, M

Reference 10

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:32.617835Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:32.617835Z digest=sha256:18c0e8107a8a4b240a385c41d25fc3fbc04bb3f9f3165b17feb4f7ecbe340aae

Observation 564289f2-8e33-459c-b88d-3a35780bc81c · outbound

This paper cites & Tanabe, M.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction & Tanabe, M

Reference 11

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:32.736231Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:32.736231Z digest=sha256:c9d4824587513167b0c561e3660e668668e3299f91c141c55a9a812a140e02ae

Observation 9e828ed0-7b5d-42e7-9f59-680b70b696cd · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 12

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:32.825027Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:32.825027Z digest=sha256:0452c6a1d2f0f183b71cba9d41acddba9e8a96655c8a919d7e9630853e823f9b

Observation fe74ba26-7c13-4578-a9be-a0bfd1b53b6d · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 13

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:32.916572Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:32.916572Z digest=sha256:64e64c68df902ddce663efd4b5cfaa6d95f982e98a495e4b2254b8b0aadd6cf9

Observation 106e740f-2e72-4c55-a524-3b3b65031ee6 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 14

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:33.019938Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:33.019938Z digest=sha256:d88f5d32cdff29150f26b3e9466ecd0348db2c4414d32769a39401f4dcb9532f

Observation 08f3f665-6bf6-488e-b27d-579921cb55ef · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 15

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:33.117201Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:33.117201Z digest=sha256:a72858d0c8b803eabb68cacbcd3619c6129f56219e73dc9d50d3dcdef5fc4d6b

Observation 98c726e2-d34e-4ea2-b1e6-a30899eafd44 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 16

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:33.164270Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:33.164270Z digest=sha256:7f9f0d413a231dae11f2adcd7f18772ec7ba28ada5502221bc2b30cc937c3039

Observation 785c098a-df74-4c22-9eff-f2052f0ff931 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 17

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:33.272258Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:33.272258Z digest=sha256:281a5b9393167eea43b79e8ef5fb21a0c7303e73f28d1f21773a88e3fdc4240c

Observation bd6b70a3-79c3-4aae-ad97-f11b3383833c · outbound

This paper cites & Mehl, F.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction & Mehl, F

Reference 18

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:33.370869Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:33.370869Z digest=sha256:1cbe3b895c797db30bd7eb2cb966bc45d6d7e1ce4671bbefa8e66d5a75aef07a

Observation a826b3ae-abfd-4c9e-9f57-542d2ae9a9c7 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 19

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:33.454454Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:33.454454Z digest=sha256:a0e762f27f72b4c0a2504f9f8cdc0e51128c738ba1c725266bbe765bdee73cf7

Observation 6fedaf04-5767-4db9-9ed2-73443fb43c74 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 20

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:46.039174Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:33.570512Z digest=sha256:1ba836e6975547dc77b12ff463298434566928d4de4fea10bd1d6f30be3b4e0e

Observation efe44891-7e27-45e9-9d90-dc9c4409e2f7 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 21

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:46.014976Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:33.691599Z digest=sha256:ce77c4fbc69ed4b647057a8e771081b8b90176e7ac03674db0aeb0c18806e3bd

Observation eb3051b0-9501-4fd6-a5e6-f881df62c64a · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 22

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.979337Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:33.789080Z digest=sha256:22c744153c46594b06694a161702767c04cd547a9be0a245e8ed986602fc2e76

Observation ba67f5d3-6fd0-46e2-ba71-6cb22949121e · outbound

This paper cites MEDITRON-70B: Scaling Medical Pretraining for Large Language Models.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction MEDITRON-70B: Scaling Medical Pretraining for Large Language Models

Reference 23

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:33.843987Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:33.843987Z digest=sha256:0f7aacfac6a5ef7ddce404d873818725127e47f5477a113cb0bdee02bf77ea7c

Observation cbd8ec33-16f8-4cfd-8caf-98a1e31f905b · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 24

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.959182Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:33.972057Z digest=sha256:a82be5056adab169c3b77ff0e6353fae9da3c627aa2be2cfbce86d7a43fb5052

Observation 5351e6b3-7d0a-4594-87fe-059af3e61685 · outbound

This paper cites & Zhang, A.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction & Zhang, A

Reference 25

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.941330Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:34.076730Z digest=sha256:3955bda512235daa9c35c122c7360bd3a243e5bb686ba53cf9525628d14e41d4

Observation db663dec-59c1-42bc-b14e-003a4171e05d · outbound

This paper cites & Zhang, R.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction & Zhang, R

Reference 26

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.924488Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:34.171627Z digest=sha256:9732548cc5ffca85ca7e9bf02efffb34605095cbf7ba708b9f778770b16b79eb

Observation 4f306433-b7b1-45d0-8bf0-55a0d700ae83 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 27

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.907883Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:34.249259Z digest=sha256:597515299ef83c4682347c936374a3fc91b9674d4669d19104c2b8583e22a1f5

Observation 6ea20e4f-3cb2-495f-8cc7-61527a4ccfc1 · outbound

This paper cites & Xie, P.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction & Xie, P

Reference 28

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.886915Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:34.364126Z digest=sha256:cf2c87f261be44e3117e3f4bbec6aa33280b2190ac826412808f954132ec8a7f

Observation 50d6cdd2-d037-4c1b-b89b-edf1a9344880 · outbound

This paper cites MetaboT: An LLM-based Multi-Agent Frameworkfor Interactive Analysis of Mass SpectrometryMetabolomics Knowledge Graphs.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction MetaboT: An LLM-based Multi-Agent Frameworkfor Interactive Analysis of Mass SpectrometryMetabolomics Knowledge Graphs

Reference 29

Resolution
verified exact
local_arxiv, observed 2026-08-07T11:27:41.426153Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:34.434571Z digest=sha256:35c700d34dad6d1c02b8efeabe2b67fec5dbba77e3ccd10326a941c623a37e03

Observation 9e0b1613-343d-468a-ab9b-2fbbf86baeae · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 30

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.866663Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:34.520726Z digest=sha256:3236a4c9b1addd6dc430306fb6df11b8f33d5cdc919cbc542ddcc3b8b912f208

Observation fe8866fe-a434-4663-a3fe-a3fbaacac416 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 31

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.842971Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:34.617883Z digest=sha256:ce5c3a7b7bbef784bb2de24345f55c727f4426eb4ac83e42e4f66ca8de0e166b

Observation 93fced44-5b4c-4141-9a53-63ea7a681b13 · outbound

This paper cites & Perera-Lluna, A.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction & Perera-Lluna, A

Reference 32

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.822892Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:34.707537Z digest=sha256:9efad3308249e1b25c1e3a1947d757ed0d77accf4b94cbb9eef70859ed796eec

Observation f54c8f69-70b7-4345-933d-25f0e4906ba1 · outbound

This paper cites Knowledge graph and large language model for metabolomics.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Knowledge graph and large language model for metabolomics

Reference 33

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.793674Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:34.790338Z digest=sha256:daeee602758b924f1e2d9e33a509b7d07744c80bfafc72651713782d9adad9b8

Observation 3da76772-c807-4232-a038-0dca563a463b · outbound

This paper cites MetaboKG: An Analysis-centric Knowledge Graph Framework for Untargeted Metabolomics.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction MetaboKG: An Analysis-centric Knowledge Graph Framework for Untargeted Metabolomics

Reference 34

Resolution
verified exact
local_arxiv, observed 2026-08-07T11:27:41.282083Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:34.894624Z digest=sha256:6e75a7787b623942ed4cf1ffac1c752e2266db48805317e9dac632a1d7a0359b

Observation 4a68d2b3-bd99-450d-9f83-b1e52a8a36e4 · outbound

This paper cites & Celik, M.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction & Celik, M

Reference 35

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.774571Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:34.967862Z digest=sha256:31441c30cef38a00d3df87434a53f9515c2b1eef6f584183a1111b264bcf25c9

Observation eba38a6a-b364-4854-9352-7d408ed9f010 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 36

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.758395Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:35.049017Z digest=sha256:46f4d8aedca0fe7c511f73a5e9db59cd0e429aa8a5bd4e521a5723b97a28950d

Observation 4d5b3c01-b16f-4046-a56e-3cd566f8920d · outbound

This paper cites & Graham, C.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction & Graham, C

Reference 37

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.743604Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:35.142039Z digest=sha256:757963f425c791b3844dd48e1d45b9304d71c16b7b2e01c0512f4d7686313c95

Observation 3e8f8456-a8f0-468b-ab33-6736847d97b6 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 38

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.727147Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:35.235769Z digest=sha256:38a2c1ffa8e8b2daa5a67d038e9550feacc9ba79a0d85459c4209059effdca41

Observation 55d777c8-52ad-4d6f-8e40-1f9160087106 · outbound

This paper cites & Theis, F.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction & Theis, F

Reference 39

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.711892Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:35.340033Z digest=sha256:53e832fccaa0bde208eeb64e9a4383c88f0c3966d2aa88b207333078860d3d7b

Observation bbbf96cb-0c9b-4e22-9aa6-9fd20f8d3150 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 40

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.694880Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:35.430858Z digest=sha256:540d7cf509d98ae0bdb39cbd6250b20315a50b73541eb7683667df0f215dadd7

Observation f835cb76-ab84-4135-902e-72b1facee513 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 41

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.679335Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:35.510676Z digest=sha256:68584d0ce7ebc0d025350bdf789044ceb6224102420f6d8fcef753c6d2edf504

Observation f9003a37-f518-4747-8d1a-49aa4557deee · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 42

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.663814Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:35.600876Z digest=sha256:480adafab5c00c7b378ae7e4fc56deaa6914337a8dbe7be96819cae9c83fcaf1

Observation 2f2bf363-ddf2-4788-a0a1-195303f21d4d · outbound

This paper cites II-Medical-8B: Medical Reasoning Model.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction II-Medical-8B: Medical Reasoning Model

Reference 43

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.649384Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:35.689919Z digest=sha256:a6d37c9ce6852914868508594aa18e7b306ad6340f20b29a95103870780d1b46

Observation a580629a-23fa-4992-aeda-a9af33df121a · outbound

This paper cites Qwen2.5 Meditron-3[7B].

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Qwen2.5 Meditron-3[7B]

Reference 44

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.634105Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:35.762556Z digest=sha256:d1e0b4c7c494cb8e4ad88f5dcaa69c253b6e759353285f30997d537c5404de78

Observation 5d1213a2-9533-4332-aff8-963fbe9cb3be · outbound

This paper cites MedGemma 1.5 Technical Report.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction MedGemma 1.5 Technical Report

Reference 45

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:35.844145Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:35.844145Z digest=sha256:477fe39a54f9503d447e68829fb05558fb09fe721ebfefd6b4da386c7122c61e

Observation 6624ec0a-6c62-4ac7-ba6e-8f46ba457946 · outbound

This paper cites FineMedLM-o1: Enhancing Medical Knowledge Reasoning Ability of LLM from Supervised Fine-Tuning to Test-Time Training.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction FineMedLM-o1: Enhancing Medical Knowledge Reasoning Ability of LLM from Supervised Fine-Tuning to Test-Time Training

Reference 46

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:35.888403Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:35.888403Z digest=sha256:5d428af4256d4e787f47c8a98952c8aac66cae26992e2a64d705f7232e44939e

Observation 38d99b02-fd2c-4a0e-8bd6-5db07934df61 · outbound

This paper cites Qwen3 Technical Report.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Qwen3 Technical Report

Reference 47

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:35.966699Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:35.966699Z digest=sha256:541f1447d2ed015d343a3e637d45283004aec430d5c39fcd81521b633c0abd09

Observation 2cc7a7a4-5499-4ccd-ab84-7915fc04d4b7 · outbound

This paper cites Gemma 3 Technical Report.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Gemma 3 Technical Report

Reference 48

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:36.064040Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:36.064040Z digest=sha256:9a482756585984540545c7958dbd65a3166e099f4c8476366e5800f5b1ffa2dc

Observation 30ca2476-03a2-4139-8749-57330568416f · outbound

This paper cites Llama 3.2 3B Instruct.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Llama 3.2 3B Instruct

Reference 49

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.619030Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:36.140888Z digest=sha256:c7280c4f6f3725b7062d059071db84ed81a90b05750eb855cc88ece8b57a7cf7

Observation e4efd697-eb54-4f94-8f6d-a72762151f9a · outbound

This paper cites BERTScore: Evaluating Text Generation with BERT.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction BERTScore: Evaluating Text Generation with BERT

Reference 50

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:36.215902Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:36.215902Z digest=sha256:d88617133a77816d9df751784ceb0cdd4c8045c33fe947c230a3738c01db1e31

Observation 207634db-31bd-442f-8a0e-20d12c5336f5 · outbound

This paper cites Rouge: A package for automatic evaluation of summaries.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Rouge: A package for automatic evaluation of summaries

Reference 51

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.602865Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:36.315209Z digest=sha256:d6faa5321c662096f31f822135cdbd68a2620250ff4fa631ca96f232cbae433d

Observation b37ea014-0df1-497b-8b1e-492fce3708bb · outbound

This paper cites & Zhu, W.-J.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction & Zhu, W.-J

Reference 52

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.585912Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:36.390617Z digest=sha256:2b168589f6c5ca84898bd0e4f1892e40660162f7aae9fc170c2a54e9cdf788bd

Observation f257f093-9734-4c7e-a764-4eede1c7ec3b · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 53

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.570152Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:36.472965Z digest=sha256:fca8093e524e933b52369b3a031020f1b3f12676a6bd2c5fc0e1ea656a45755e

Observation 5e52b7ed-9aae-43ac-8f92-4e83b867a40a · outbound

This paper cites & Leskovec, J.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction & Leskovec, J

Reference 54

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.554898Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:36.557329Z digest=sha256:857614c0db6c106efd3ce219ea44e46cf82538c4e25b0913186713111d0c6f53

Observation bd1af1b5-3654-4fe5-b1a1-1d8b776ec7d7 · outbound

This paper cites L., Wang, Y ., Carter, B.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction L., Wang, Y ., Carter, B

Reference 55

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.540854Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:36.642302Z digest=sha256:80d12c34a8a87e9b186c56fb8b2277c957eeeddb1fac239a77fbe74f93d88e83

Observation 93620b4e-4d0a-45d5-80dc-2fea076cf954 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 56

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.526231Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:36.724263Z digest=sha256:f3d043957e42454b7037dfcd8aa4b649614a23a143e46ec0b2969a660934a914

Observation 73234994-d9d8-4b02-ad97-bcf82651fc4b · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 57

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.507146Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:36.823541Z digest=sha256:c87f2b91d6cd02da7dab6d2601906598bec417e7a74f1439eb69754fd5fd17f5

Observation 787c67c1-fac9-4507-9d69-cae05af2d9d6 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 58

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.484248Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:36.892480Z digest=sha256:be6c7016942103e1fe3bff3cefb5542a4a1ccbb4b92a37b45a85d9f79c29f2f5

Observation f17b7c22-9bd8-47d0-b38c-edcbb575f40e · outbound

This paper cites E., Brismar, K., Barr, G.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction E., Brismar, K., Barr, G

Reference 59

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.465337Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:36.954533Z digest=sha256:6c76e308f7f25acd4fcb30d5665d945cb475cbb87dd7748ad862e397815a2efc

Observation 09425aeb-9462-4da6-b852-daa48d1bd052 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 60

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.446907Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:37.023490Z digest=sha256:5e6c3a6d8ada03f3330048b8f15c1b68c640b74a48c14df880576dbd1676299e

Observation efa12466-0ad6-4fb6-8262-74ec77aaa3de · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 61

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.426713Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:37.082404Z digest=sha256:6f278b0e2a162d2c4fd8a124106575a533db7086e5a6828f7488653151015123

Observation ce314ef1-2c79-4aeb-9a8c-01f30d866097 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 62

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.403944Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:37.168044Z digest=sha256:bac12d04c295a47fb79144bb7364a7be3f4c9f6fe176aabe5a3b68f228f43929

Observation dae70e67-d278-40bb-a8fb-47dca7d9db85 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 63

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.378571Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:37.227511Z digest=sha256:9501f88783802cb7eb58e834bff938c6cd605574fc28378271ab385370f5939e

Observation 45bf7b0d-839e-4d56-804d-26373988c7b6 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 64

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.354886Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:37.288400Z digest=sha256:72e600feefec5da25af838ddcc27f87ac4a3798ad8958fbc82598b7825eaec7a

Observation d95da02b-0b06-4b6d-9d31-b74775a24792 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 65

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.337927Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:37.372146Z digest=sha256:3b4fec6c702f726a6575a19d67756bd22cd67c063f8f5f1d7cab9e4726c8d514

Observation 2b66ade2-89f1-4cdf-be80-01a3e7376c2d · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 66

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.316156Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:37.411890Z digest=sha256:e6c244812c7f785c5952e4d894aed1ada880162d3bc9354bbca5510048186b21

Observation bb46c73f-3122-4424-8076-a03d34bfc69d · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 67

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.287909Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:37.464119Z digest=sha256:351bba366e9a671129c3eb6d63c748a0f534130b08a26cb218ed4cad9f0391ad

Observation 93184b4b-31f2-4a96-a25f-563605016dda · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 68

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:37.531799Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:37.531799Z digest=sha256:4209857524a49389465520bdcf3bd99f33c07e83849a21ef6f355bff9d8b9684

Observation 4b5d9181-8d56-44b7-b2d9-0c1b5977336e · outbound

This paper cites ChemBERTa-2: Towards Chemical Foundation Models.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction ChemBERTa-2: Towards Chemical Foundation Models

Reference 69

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:37.612240Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:37.612240Z digest=sha256:1c7086d27b8d137682987cfe380925d2b6c33e21d2f8fac4bc13983ba924710d

Observation c247ced5-9dce-477f-b0c6-a4378467024f · outbound

This paper cites SMILES, a chemical language and information system.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction SMILES, a chemical language and information system

Reference 70

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:37.709809Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:37.709809Z digest=sha256:95deb847b95dead2b8443c673c86d7c571643fd6645047b0d862be3e24c2b0e8

Observation 311c99f2-73fd-4b49-9ed4-6e0254bcdbaa · outbound

This paper cites NeuML/pubmedbert-base-embeddings.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction NeuML/pubmedbert-base-embeddings

Reference 71

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:45.246998Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:37.756865Z digest=sha256:49fdf50474873aee2c60cc60cf2b06af2585bce14aa868529bf07cd41b145043

Observation 46d4f797-0a5d-4816-9cb5-55d0b24cc6bb · outbound

This paper cites OpenAI GPT-5 System Card.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction OpenAI GPT-5 System Card

Reference 72

Resolution
unresolved
no resolver link, observed 2026-08-07T11:27:37.817852Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T11:27:37.817852Z digest=sha256:91575f5b554d8b0b1c9eb8f8ad0755f3def902279c0cb87c8b98e7ce9c633606

Observation 1d50d652-8447-40b8-9e59-96daabc24ac1 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 73

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:45.065237Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:37.914305Z digest=sha256:7bdcf8650870aeb958ac13bfcda6ac0e8c5798a18fa9b3468b18e402a22cc964

Observation f8935c07-55ce-49ad-bbe2-7a311d3e1a57 · outbound

This paper cites Each record included reaction text, participating metabolite identifiers, and enzyme annotations.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Each record included reaction text, participating metabolite identifiers, and enzyme annotations

Reference 74

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:44.865425Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:38.000448Z digest=sha256:894f01eb763a20dcc5d2a104553aec35b7de6242ccbf22c6ec20fe8d9d1b5449

Observation bcdc5ff5-edae-4e02-9e03-4c8642534ba9 · outbound

This paper cites This database structure enabled metadata-filtered retrieval of biochemically related metabolites before embedding-based ranking.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction This database structure enabled metadata-filtered retrieval of biochemically related metabolites before embedding-based ranking

Reference 75

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:44.679738Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:38.086577Z digest=sha256:db3789ea6467ce0b01ddfc64f96d43895154e6bacb0d3842e89e0cfc07ca3d48

Observation 6b8d7f2a-0362-4c55-9344-df02e5248bba · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 76

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:44.586124Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:38.171186Z digest=sha256:360e03cef3fc748ca1b4c3fdca504529c3ee1ac344cad780702a6566b9fad01a

Observation f0aaad77-487a-4930-a77b-748d5a7821ba · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 77

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:44.397493Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:38.229566Z digest=sha256:8486ec69ce18739103cdf523bc3b2deb313851071104c6761cf4c90bf2d1ae9b

Observation b90f394b-2635-434e-a496-3a559e26b64d · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 78

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:44.195359Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:38.263902Z digest=sha256:cb064c2d7637081373a09ef81ae531b3802dd95172499cc2b87f31a2b25754c3

Observation b526ccdb-e0f4-4516-a2c6-4a5e865c45ba · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 79

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:44.064935Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:38.356271Z digest=sha256:c65f3d5dde609169b10274437d18826162f8b09c268173dd9875dc8f6479f917

Observation 14d3d619-6366-490e-8bdc-3687a81d4864 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 80

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:43.906860Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:38.461657Z digest=sha256:16c7280da7459882b3db88e9a2fee216e14ab3db97e40d68d0373c504879348f

Observation fa28a435-ac0f-4344-bf81-ef1333984a1f · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 81

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:43.792604Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:38.567357Z digest=sha256:09901b05c46bd055e8f08e75a8c505b873724311426d6668ad5d7c62dc3deab4

Observation 555477b0-9501-480f-9026-cc7d31baf314 · outbound

This paper cites Step 3: Pathway-Based Retrieval.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Step 3: Pathway-Based Retrieval

Reference 82

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:43.641942Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:38.636401Z digest=sha256:dfcdf44ba6e1911f4b2885fb7d804aa965ba0d00feb912591822628502323d0a

Observation 483ec533-8594-41b7-bfaa-64614dbf04c4 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 83

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:43.515674Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:38.701614Z digest=sha256:c43808fcc207a973d32743ab01de324bffef6d0617100b43897f311c0fe3317c

Observation 7d36140f-4b6c-4317-b185-469c529689da · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 84

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:43.377017Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:38.779105Z digest=sha256:f92412eb39d3d22d04cd44d445c8d1b029b515450114d61c1f858c69f6b7d909

Observation 114c6d33-31ec-429b-b868-6838256b9152 · outbound

This paper cites You are a biomedical expert in metabolomics and biochemical pathways. Base your reasoning on the provided contexts and integrate general biochemical knowledge.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction You are a biomedical expert in metabolomics and biochemical pathways. Base your reasoning on the provided contexts and integrate general biochemical knowledge

Reference 85

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:43.229676Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:38.850996Z digest=sha256:ea63c93586e7b5670f6429d2aec386b77dbbb7f07339e670a3cd7cd20754f0c3

Observation e1b14fe9-9157-4375-9037-cdcab975c2a5 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 93

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:43.016090Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:39.495095Z digest=sha256:c515c5c1090b270948a06b577afac03e4fb3097608b1c4f04abab7e9a7ed5730

Observation fb04b16f-5681-4d2d-8698-c9b8815a8f15 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 94

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:42.662024Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:39.541533Z digest=sha256:93aa7b68360723ee946cbdad1fe35bbfef7b7124eed44c041284edb986c244c3

Observation 49e56324-b7ca-470d-a4f9-2441172ed5d9 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 97

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:42.927240Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:39.765949Z digest=sha256:ee7dd5a7e54db15cf08a3ad6aa53cb257fc7581a0cd8804e7fbaaa242d161951

Observation b5d8f5d8-b200-4c2a-8125-223ac9d4e534 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 99

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:42.422248Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:39.966476Z digest=sha256:24b88fe03aa2e2065cbbfccd1e11b35a1f0301876deb2f39820a6d102e82fd33

Observation 2b481995-8284-4cb0-ae56-572d7a04bf33 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 100

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:42.796657Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:40.016104Z digest=sha256:d5d306bbaf325954d76cece35adf12f1fcfd099f0971f5a8845f21681b93ebec

Observation 9b082caf-a759-45e6-b8cc-cade75ac737f · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 101

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:43.121943Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:40.152187Z digest=sha256:4c589a18c036ece89a078a0efc87b4c9dcfcc08a3264d3d0118109d9c03d5c69

Observation 4faf8323-fb20-4c0e-8a3b-364b4768f681 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 102

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:42.563543Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:40.230622Z digest=sha256:2a03f6f5928fc7464ca392b25ddf838d86362300667fe89feb38d063286fbdfe

Observation 093bf85d-3feb-49c7-8885-ecdc76847f44 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 103

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:42.299435Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:40.342944Z digest=sha256:fb56d39b1a9d6bcc036a46993098d70589ec66ff756fa6dc73597737eb1ebe37

Observation 1e25cf75-2f99-4188-a7f6-8bb8b9a24bc1 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 106

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:41.900214Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:40.696712Z digest=sha256:2818f3f4f5c8844bc4c3958611a39c4b7b6c30f33d3570ebb3aa9a55d011103a

Observation 501a3f7b-3614-4a95-bf54-00ad370af71f · outbound

This paper cites Non-RAG Output Format.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Non-RAG Output Format

Reference 107

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T11:27:41.800233Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:40.720975Z digest=sha256:1e4ee19851a8b0c39e561e9593941e36cba8633ac0d5c8a10f1baf297e14f14a

Observation c2795b34-e0c3-415e-9907-d46b9ad73dc6 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 108

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:42.211706Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:40.776482Z digest=sha256:ef72af49ad8f40c1a29d8fdfafbe01df8f47920302ddfb29184898c5c6f49ca7

Observation c308e910-c1b2-4824-a385-228930943bcc · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 109

Resolution
unresolved
raw_fallback, observed 2026-08-07T11:27:42.059709Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:40.816099Z digest=sha256:05fb5c14f22b0c1254582ab1990f3a4faa24d50a4ccc5d3b60d1fb7ee153e42b

Observation d6d05928-a461-44e6-9132-75bf7ff5b0e3 · outbound

This paper cites an unresolved cited work.

MetaboLLM: a metabolomics-specialized large language model for biochemical knowledge integration and predictive metabolite graph construction Unresolved cited work

Reference 110

Resolution
malformed identifier
raw_fallback, observed 2026-08-07T11:27:41.631848Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-07T11:27:40.866594Z digest=sha256:133b61afae7371d62d0a0a10ff3e33b0734a5ef0e73e7a3e08d5456f8b9e8c69

Pith citing papers

No inbound Pith citation observations are available.