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arxiv: 1710.10340 · v1 · pith:6X7YMHIAnew · submitted 2017-10-27 · ⚛️ physics.chem-ph

Photobleaching of randomly-rotating fluorescently-decorated particles

classification ⚛️ physics.chem-ph
keywords particlesfluorophoresfluctuationsphotobleachingbrightnessindividuallargenon-monotonicities
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Randomly rotating particles that have been isotropically labeled with rigidly linked fluorophores will undergo non-isotropic (patchy) photobleaching under illumination due to the dipole coupling of fluorophores with light. For a rotational diffusion rate $D$ of the particle and a photobleaching timescale $\tau$ of the fluorophores, the dynamics of this process are characterized by the dimensionless combination $D \tau$. We find significant interparticle fluctuations at intermediate $D \tau$. These fluctuations vanish at both large and small $D \tau$, or at small or large elapsed times $t$. Associated with these fluctuations between particles, we also observe transient non-monotonicities of the brightness of individual particles. These non-monotonicities can be as much 20\% of the original brightness. We show that these novel photobleach-fluctuations dominate over variability of single-fluorophore orientation when there are at least $10^3$ fluorophores on individual particles.

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