Paper Citation Record · LEDGER

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM

As of 12 August 2026, this Paper Citation Record lists 27 of 27 outbound references and 3 inbound Pith citation observations for arXiv:2507.11839.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2507.11839 v1

Coverage vector

measured 27 of 27 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-06T17:07:02.407200Z

measured 30 of 30 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-11T06:34:44.6726+00:00

measured 3 of 3 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-05-25T06:46:42.317094Z

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: arxiv_reference, observed 2026-05-25T06:50:28.647300Z

Reference resolution

27 of 27 outbound references displayed

verified exact0
verified fuzzy20
unresolved7
parse uncertain0
malformed identifier0
metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation c894d6a8-df55-4281-b338-70315d9c14d7 · outbound

This paper cites J., Bambrick, J., et al.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM J., Bambrick, J., et al

Reference 1

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:07.421269Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation f50d3a31-cff1-4955-a183-d14507bcd067 · outbound

This paper cites S., Jude, K.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM S., Jude, K

Reference 2

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:07.224717Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation bf3cf537-a03a-43d8-9cec-9d22fae6b5b0 · outbound

This paper cites an unresolved cited work.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Unresolved cited work

Reference 3

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:07:07.046033Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation 6bd20c93-f845-48fc-a343-593180c190d4 · outbound

This paper cites H., Zielinski, M., Sargeant, T., et al.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM H., Zielinski, M., Sargeant, T., et al

Reference 4

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:06.728382Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation fb6323d1-0b65-4dea-a8e5-00b77c862ec5 · outbound

This paper cites Highly accurate protein structure prediction with alphafold.Nature, 596(7873): 583–589, 2021.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Highly accurate protein structure prediction with alphafold.Nature, 596(7873): 583–589, 2021

Reference 5

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:06.421535Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation fc3d7d73-59ab-42e1-a240-dce4ae2f0887 · outbound

This paper cites Elucidating the design space of diffusion-based generative models.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Elucidating the design space of diffusion-based generative models

Reference 6

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:06.074598Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation 1d4b0299-2dad-43a0-a5ec-5ed4f6893e16 · outbound

This paper cites Guiding a diffusion model with a bad version of itself.Advances in Neural Information Processing Systems, 37:52996–53021, 2024.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Guiding a diffusion model with a bad version of itself.Advances in Neural Information Processing Systems, 37:52996–53021, 2024

Reference 7

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:05.769342Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation b8d54f8a-7343-46c8-a1a0-044008119203 · outbound

This paper cites Crafting papers on machine learning.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Crafting papers on machine learning

Reference 8

Resolution: unresolved; no resolver link, observed 2026-08-06T17:07:00.973598Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 85b58236-276f-48f4-969e-aa775996b6b5 · outbound

This paper cites Wide neural networks of any depth evolve as linear models under gradient descent.Advancesin neural information processing systems, 32, 2019.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Wide neural networks of any depth evolve as linear models under gradient descent.Advancesin neural information processing systems, 32, 2019

Reference 9

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:05.412160Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation 11710a68-7d7e-4271-90b8-2125bfbe1263 · outbound

This paper cites Evolutionary-scale prediction of atomic-level protein structure with a language model.Science, 379(6637): 1123–1130, 2023.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Evolutionary-scale prediction of atomic-level protein structure with a language model.Science, 379(6637): 1123–1130, 2023

Reference 10

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:05.150551Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation ad56e6a4-e735-46f5-adb6-1e7c62341ec7 · outbound

This paper cites Flow Matching for Generative Modeling.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Flow Matching for Generative Modeling

Reference 11

Resolution: unresolved; no resolver link, observed 2026-08-06T17:07:01.171109Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 17bc4361-6129-49af-aa85-893f195c60a5 · outbound

This paper cites Rectified Flow: A Marginal Preserving Approach to Optimal Transport.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Rectified Flow: A Marginal Preserving Approach to Optimal Transport

Reference 12

Resolution: unresolved; no resolver link, observed 2026-08-06T17:07:01.253955Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 6c1725c3-1276-4129-89f5-d0d975872800 · outbound

This paper cites Flow straight and fast: Learning to generate and transfer data with rectified flow.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Flow straight and fast: Learning to generate and transfer data with rectified flow

Reference 13

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:04.818555Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation 394f16dc-3bc6-4ea9-9437-008bc0aabfca · outbound

This paper cites Flowgrad: Controlling the output of generative odes with gradients.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Flowgrad: Controlling the output of generative odes with gradients

Reference 14

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:04.559594Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation 67ab62e4-cd15-48a0-b2ab-e40d10435560 · outbound

This paper cites Instaflow: One step is enough for high-quality diffusion-based text-to-image generation.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Instaflow: One step is enough for high-quality diffusion-based text-to-image generation

Reference 15

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:04.393476Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation f57f6474-f7e5-4868-9aeb-8ab5a1c26f5b · outbound

This paper cites Dpm-solver: A fast ode solver for diffusion probabilistic model sampling in around 10 steps.Advances in Neural Information Processing Systems, 35:5775–5787, 2022.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Dpm-solver: A fast ode solver for diffusion probabilistic model sampling in around 10 steps.Advances in Neural Information Processing Systems, 35:5775–5787, 2022

Reference 16

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:04.195011Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation 29594464-2cd5-4c51-881d-4b41c1e9d841 · outbound

This paper cites Inference-Time Scaling for Diffusion Models beyond Scaling Denoising Steps.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Inference-Time Scaling for Diffusion Models beyond Scaling Denoising Steps

Reference 17

Resolution: unresolved; no resolver link, observed 2026-08-06T17:07:01.617039Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 702b5d07-871e-49e1-93d7-aa3f6389d8b1 · outbound

This paper cites Bindcraft: one-shot design of functional protein binders.bioRxiv, pp.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Bindcraft: one-shot design of functional protein binders.bioRxiv, pp

Reference 18

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:03.995659Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation f608d188-faa9-4823-8d8e-8d3ab1fb1385 · outbound

This paper cites Denoising Diffusion Implicit Models.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Denoising Diffusion Implicit Models

Reference 19

Resolution: unresolved; no resolver link, observed 2026-08-06T17:07:01.811323Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 60af52bc-2875-40ed-a935-4d52aa0b736e · outbound

This paper cites an unresolved cited work.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Unresolved cited work

Reference 20

Resolution: unresolved; no resolver link, observed 2026-08-06T17:07:01.878089Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 030fe954-4793-4531-8b85-ceffff4e63f6 · outbound

This paper cites D., Boitreaud, J., Dent, J., McPartlon, M., Meier, J., Reis, V., Rogozhonikov, A., and Wu, K.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM D., Boitreaud, J., Dent, J., McPartlon, M., Meier, J., Reis, V., Rogozhonikov, A., and Wu, K

Reference 21

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:03.794669Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation 131b3e4b-aa5d-49a9-8708-8f6284d246fd · outbound

This paper cites Scientific discovery in the age of artificial intelligence.Nature, 620(7972):47–60, 2023.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Scientific discovery in the age of artificial intelligence.Nature, 620(7972):47–60, 2023

Reference 22

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:03.658409Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation c444e2ef-919a-4b14-b583-b56c976038f1 · outbound

This paper cites L., Juergens, D., Bennett, N.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM L., Juergens, D., Bennett, N

Reference 23

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:03.496508Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation adf108be-3612-4e33-9ce6-595fef782c42 · outbound

This paper cites Boltz-1: Democratizing biomolecular interaction modeling.bioRxiv, pp.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Boltz-1: Democratizing biomolecular interaction modeling.bioRxiv, pp

Reference 24

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:03.297398Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation bce7a78e-ac81-40e2-a0fb-72e61d3f40ce · outbound

This paper cites Diffusion models: A comprehensive survey of methods and applications.ACM Computing Surveys, 56(4):1–39, 2023.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Diffusion models: A comprehensive survey of methods and applications.ACM Computing Surveys, 56(4):1–39, 2023

Reference 25

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:03.066981Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation 6d1c48a4-f75b-41bb-a4e2-812fabe3f291 · outbound

This paper cites Good subnetworks provably exist: Pruning via greedy forward selection.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Good subnetworks provably exist: Pruning via greedy forward selection

Reference 26

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:02.802125Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation 0a3a7cf4-8a9b-4cbd-b6b0-f986b2c1467c · outbound

This paper cites Are all layers created equal?Journal of Machine Learning Research, 23 (67):1–28, 2022.

Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM Are all layers created equal?Journal of Machine Learning Research, 23 (67):1–28, 2022

Reference 27

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:07:02.605113Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Pith citing papers

Observation e9ed6278-fbca-4540-b7e5-d3e74db9754f · inbound

Proteo-R1: Reasoning Foundation Models for De Novo Protein Design cites this paper.

Proteo-R1: Reasoning Foundation Models for De Novo Protein Design Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM

Reference 4

Resolution: verified exact; arxiv_id, observed 2026-05-11T15:36:13.427356Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation a311542c-1c86-4b6c-9bf4-3f52439ed6ab · inbound

ProtDBench: A Unified Benchmark of Protein Binder Design and Evaluation cites this paper.

ProtDBench: A Unified Benchmark of Protein Binder Design and Evaluation Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM

Reference 7

Resolution: verified exact; arxiv_id, observed 2026-05-09T06:40:41.268508Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

Observation 64408723-6aa5-4452-a218-be4362a984dd · inbound

ProtDBench: A Unified Benchmark of Protein Binder Design and Evaluation cites this paper.

ProtDBench: A Unified Benchmark of Protein Binder Design and Evaluation Protenix-Mini: Efficient Structure Predictor via Compact Architecture, Few-Step Diffusion and Switchable pLM

Reference 7

Resolution: verified exact; arxiv_id, observed 2026-05-25T06:50:28.651340Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.