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Paper Citation Record · LEDGER

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models

As of 21 August 2026, this Paper Citation Record lists 52 of 52 outbound references and 0 inbound Pith citation observations for arXiv:2608.06779.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2608.06779 v1

Coverage vector

measured 52 of 52 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-10T21:03:20.231752Z

measured 52 of 52 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-21T06:32:19.484+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

52 of 52 outbound references displayed

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External citation measurements

No source-named external measurement is stored.

Outbound references

Observation cec30a78-09d6-4be0-a324-6ac09e203233 · outbound

This paper cites Open-weight genome language model safeguards: Assessing robustness via adversarial fine-tuning.arXiv preprint arXiv:2511.19299, 2025.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Open-weight genome language model safeguards: Assessing robustness via adversarial fine-tuning.arXiv preprint arXiv:2511.19299, 2025

Reference 1

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Source-reported events for the cited work

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Observation 28ffb172-6d8c-4fc8-a838-2ea0e85d8bcb · outbound

This paper cites Protein design, generative ai and biological security.Frontiers in Microbiology, 17:1817535, 2026.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Protein design, generative ai and biological security.Frontiers in Microbiology, 17:1817535, 2026

Reference 2

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verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

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Observation 12ab0e0c-cd3a-4261-80ed-0409462e6014 · outbound

This paper cites Inference-time toxicity mitigation in protein language models.arXiv preprint arXiv:2603.04045, 2026.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Inference-time toxicity mitigation in protein language models.arXiv preprint arXiv:2603.04045, 2026

Reference 3

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verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

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Observation 4ba0ea63-bb05-4ecd-82e1-10cc9797f422 · outbound

This paper cites Adversarial attacks on protein language models.bioRxiv, pages 2022–10, 2022.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Adversarial attacks on protein language models.bioRxiv, pages 2022–10, 2022

Reference 4

Resolution
verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:19.827139Z digest=sha256:f9ba7fa8d0d3eb7ea2b2be6458294aeaed03939cbc6704c762e965926829abb4

Observation 99bf51da-cc26-4742-8341-72814874b9da · outbound

This paper cites A web server and mobile app for computing hemolytic potency of peptides.Scientific reports, 6(1):22843, 2016.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models A web server and mobile app for computing hemolytic potency of peptides.Scientific reports, 6(1):22843, 2016

Reference 5

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

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Observation 4ebca322-1b52-46ef-b6de-20f506a333e9 · outbound

This paper cites Biopython: freely available python tools for computational molecular biology and bioinformatics.Bioinformatics, 25(11):1422, 2009.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Biopython: freely available python tools for computational molecular biology and bioinformatics.Bioinformatics, 25(11):1422, 2009

Reference 6

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unresolved
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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-10T21:03:19.858518Z digest=sha256:3277eafbc4dc062edc3b8f996631bd8df9a98b64e4d27c824920c5076258b5c0

Observation c9e7415c-4449-4565-8a9d-33bab8677a19 · outbound

This paper cites PepCVAE: Semi-Supervised Targeted Design of Antimicrobial Peptide Sequences.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models PepCVAE: Semi-Supervised Targeted Design of Antimicrobial Peptide Sequences

Reference 7

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unresolved
no resolver link, observed 2026-08-10T21:03:19.870003Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-10T21:03:19.870003Z digest=sha256:310a3e5db911be8b18dff4e6d83921e5f7997428088cce473d4c8e84eb716b95

Observation 6b153ca4-eec4-4ddd-bf03-990ce0d9c23e · outbound

This paper cites Immunogenicity risk assessment of synthetic peptide drugs and their impurities.Drug Discovery Today, 28(10):103714, 2023.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Immunogenicity risk assessment of synthetic peptide drugs and their impurities.Drug Discovery Today, 28(10):103714, 2023

Reference 8

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

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Observation c65e1462-9758-44a3-bd3b-b234b716cdd6 · outbound

This paper cites Variational autoencoder for generation of antimicrobial peptides.ACS omega, 5(33):20746–20754, 2020.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Variational autoencoder for generation of antimicrobial peptides.ACS omega, 5(33):20746–20754, 2020

Reference 9

Resolution
verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

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Observation b6f9a1b3-6bf3-416b-9662-d0412937fcfa · outbound

This paper cites Efficient mhc class i-peptide binding is required but does not ensure mhc class i-restricted immunogenicity.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Efficient mhc class i-peptide binding is required but does not ensure mhc class i-restricted immunogenicity

Reference 10

Resolution
verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

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Observation ec41a8f2-d246-439a-b720-043357bd8427 · outbound

This paper cites Unveiling potential threats: backdoor attacks in single-cell pre-trained models.Cell Discovery, 10(1):122, 2024.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Unveiling potential threats: backdoor attacks in single-cell pre-trained models.Cell Discovery, 10(1):122, 2024

Reference 11

Resolution
verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:19.919254Z digest=sha256:14f59ab39caf9afca0fe5284ab484e833fd2655aa1a08b923c154cc973e14574

Observation 81a26b80-1f26-40f5-9cd4-aef18cca3618 · outbound

This paper cites Hla-drb1* 07: 01 is associated with a higher risk of asparaginase allergies.Blood, The Journal of the American Society of Hematology, 124(8):1266–1276, 2014.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Hla-drb1* 07: 01 is associated with a higher risk of asparaginase allergies.Blood, The Journal of the American Society of Hematology, 124(8):1266–1276, 2014

Reference 12

Resolution
verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

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Observation ee2731a5-b593-422b-93e1-4937bab194a9 · outbound

This paper cites Protgpt2 is a deep unsupervised language model for protein design.Nature communications, 13(1):4348, 2022.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Protgpt2 is a deep unsupervised language model for protein design.Nature communications, 13(1):4348, 2022

Reference 13

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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

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Observation 1cb83476-6f87-4070-99cb-6992763a1aea · outbound

This paper cites Triggerless backdoor attack for nlp tasks with clean labels.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Triggerless backdoor attack for nlp tasks with clean labels

Reference 14

Resolution
verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

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Observation 3c6b6b50-19d1-4eac-b76c-704e55bf7e18 · outbound

This paper cites Allele frequency net database (afnd) 2020 update: gold- standard data classification, open access genotype data and new query tools.Nucleic acids research, 48(D1):D783–D788, 2020.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Allele frequency net database (afnd) 2020 update: gold- standard data classification, open access genotype data and new query tools.Nucleic acids research, 48(D1):D783–D788, 2020

Reference 15

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

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Observation 3a722afe-9bd3-45b5-9fa2-3ee4805ab523 · outbound

This paper cites Functional classification of class ii human leukocyte antigen (hla) molecules reveals seven different supertypes and a surprising degree of repertoire sharing across supertypes.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Functional classification of class ii human leukocyte antigen (hla) molecules reveals seven different supertypes and a surprising degree of repertoire sharing across supertypes

Reference 16

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

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Observation 5257dfe0-dc56-4c09-968b-782ba0a1d098 · outbound

This paper cites Design and engineering of deimmunized biothera- peutics.Current opinion in structural biology, 39:79–88, 2016.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Design and engineering of deimmunized biothera- peutics.Current opinion in structural biology, 39:79–88, 2016

Reference 17

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verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

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Observation b73c5d16-3287-4694-9083-7c64a8bf24a1 · outbound

This paper cites BadNets: Identifying Vulnerabilities in the Machine Learning Model Supply Chain.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models BadNets: Identifying Vulnerabilities in the Machine Learning Model Supply Chain

Reference 18

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Source-reported events for the cited work

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source=pdf_text observed=2026-08-10T21:03:19.998389Z digest=sha256:1010d337909f5e5b0f518d75adf20fe01800429920590ca078d0504f6e9c80fb

Observation 1c78096b-0c9a-4fe6-8e9a-2f5d7e553874 · outbound

This paper cites In silico approach for predicting toxicity of peptides and proteins.PloS one, 8(9):e73957, 2013.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models In silico approach for predicting toxicity of peptides and proteins.PloS one, 8(9):e73957, 2013

Reference 19

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

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Observation 14022e96-ef42-4364-9822-04b7a949a9cb · outbound

This paper cites RITA: a Study on Scaling Up Generative Protein Sequence Models.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models RITA: a Study on Scaling Up Generative Protein Sequence Models

Reference 20

Resolution
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Source-reported events for the cited work

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Observation f4f8cf31-2413-4224-a4a8-26d7287c4044 · outbound

This paper cites an unresolved cited work.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Unresolved cited work

Reference 21

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.015794Z digest=sha256:42c03c3a632d93d5ebc576a7b2ddaeb34e05ebd5a81faad152b63d5ad819ae1d

Observation 6f26475c-3732-42ad-ba0e-19ab8dbfc42c · outbound

This paper cites T-cell dependent immunogenicity of protein therapeutics pre-clinical assessment and mitigation–updated consensus and review 2020.Frontiers in immunology, 11:1301, 2020.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models T-cell dependent immunogenicity of protein therapeutics pre-clinical assessment and mitigation–updated consensus and review 2020.Frontiers in immunology, 11:1301, 2020

Reference 22

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verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

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Observation 2d9ecacb-6354-4b18-a98e-998d1fce9e99 · outbound

This paper cites Hla-associated adverse drug reactions-scoping review.Clinical and Transla- tional Science, 14(5):1648–1658, 2021.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Hla-associated adverse drug reactions-scoping review.Clinical and Transla- tional Science, 14(5):1648–1658, 2021

Reference 23

Resolution
verified fuzzy
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Source-reported events for the cited work

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source=pdf_text observed=2026-08-10T21:03:20.027456Z digest=sha256:99deace2a2ca770b5fa8d48c732f833a8773f63ecd8048282986281a49ec1c4e

Observation e1b5fbe5-45ad-46aa-b67a-e52a5135f5a6 · outbound

This paper cites Removing t-cell epitopes with computational protein design.Proceedings of the National Academy of Sciences, 111(23):8577–8582, 2014.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Removing t-cell epitopes with computational protein design.Proceedings of the National Academy of Sciences, 111(23):8577–8582, 2014

Reference 24

Resolution
verified fuzzy
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

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Observation 9a348862-f0ac-467c-b38c-56ecf750693b · outbound

This paper cites Poisoning the Genome: Targeted Backdoor Attacks on DNA Foundation Models.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Poisoning the Genome: Targeted Backdoor Attacks on DNA Foundation Models

Reference 25

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.042139Z digest=sha256:a4577d87ae84f21de52902f0475a8df49699160b0c1acc5c7678fb093933c62c

Observation 83d6ef80-a807-4086-84d7-978aee28c229 · outbound

This paper cites an unresolved cited work.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Unresolved cited work

Reference 26

Resolution
unresolved
raw_fallback, observed 2026-08-10T21:03:21.391587Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.048251Z digest=sha256:84d797ff09d3e71b17cabbf884c44cdb9267be64c8c224f5f567cb6a0382f8f1

Observation 4d713e60-a74e-4351-a70b-d5514149c614 · outbound

This paper cites Genoarmory: A unified evaluation framework for adversarial attacks on genomic foundation models.arXiv preprint arXiv:2505.10983, 2025.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Genoarmory: A unified evaluation framework for adversarial attacks on genomic foundation models.arXiv preprint arXiv:2505.10983, 2025

Reference 27

Resolution
verified exact
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.053229Z digest=sha256:21515e57c1722833e2f791c51f9311a3cd7725dfa944d00fe92745424f1d37cb

Observation a01b5908-28ea-4fce-b59d-54831c9d7f38 · outbound

This paper cites Hla-b* 5701 screening for hypersensitivity to abacavir.New England Journal of Medicine, 358(6):568– 579, 2008.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Hla-b* 5701 screening for hypersensitivity to abacavir.New England Journal of Medicine, 358(6):568– 579, 2008

Reference 28

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.058311Z digest=sha256:0d5e32b0ac444439d12654fb8123c891e7f2e42844c19993f1950bed7ccf3171

Observation b6fa7fa9-f50e-471c-afb9-acfa943fefac · outbound

This paper cites Progen2: exploring the boundaries of protein language models.Cell systems, 14(11):968–978, 2023.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Progen2: exploring the boundaries of protein language models.Cell systems, 14(11):968–978, 2023

Reference 29

Resolution
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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.063904Z digest=sha256:fb4e398fce36badc1537f7af5bbcb388d2d48dfeba60a29997ada3daeb26536a

Observation 813e8db5-051e-4a94-a02e-d1d7baccf7e1 · outbound

This paper cites Accurate prediction of hla class ii antigen pre- sentation across all loci using tailored data acquisition and refined machine learning.Science Advances, 9(47):eadj6367, 2023.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Accurate prediction of hla class ii antigen pre- sentation across all loci using tailored data acquisition and refined machine learning.Science Advances, 9(47):eadj6367, 2023

Reference 30

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raw_fallback, observed 2026-08-10T21:03:21.287687Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.076342Z digest=sha256:b35b8fc15276f372c1ee5391c71f31cb3079d9a0bd4fe42c8b0a8f65a4e38267

Observation 3602e7e5-c590-420e-9500-6d7e1bd7aa83 · outbound

This paper cites Silent sabotage: Internal state triggered backdoor attacks on llm-powered robotic systems.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Silent sabotage: Internal state triggered backdoor attacks on llm-powered robotic systems

Reference 31

Resolution
verified fuzzy
raw_fallback, observed 2026-08-10T21:03:21.256316Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.092096Z digest=sha256:d01e050dd34a10ecd44010eaa4361ed984bb38fa782953b810175c5b5a310049

Observation d3acb6a7-571e-4393-a6cc-b348680a130e · outbound

This paper cites Dynamic deep prompt optimization for defending against jailbreak attacks on llms.Proceedings of the AAAI Confer- ence on Artificial Intelligence, 40(42):35742–35750, 2026.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Dynamic deep prompt optimization for defending against jailbreak attacks on llms.Proceedings of the AAAI Confer- ence on Artificial Intelligence, 40(42):35742–35750, 2026

Reference 32

Resolution
verified fuzzy
raw_fallback, observed 2026-08-10T21:03:21.226052Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.098494Z digest=sha256:a151417181ff7d65e62217fd1ebe7554d0f28f61db5a17d4ac99cbac0f9c0aff

Observation 7d7f76d2-c1ef-4bb8-a336-ad61d6c3e6fe · outbound

This paper cites Diversity in clinical and biomedical research: a promise yet to be fulfilled.PLoS medicine, 12(12):e1001918, 2015.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Diversity in clinical and biomedical research: a promise yet to be fulfilled.PLoS medicine, 12(12):e1001918, 2015

Reference 33

Resolution
verified fuzzy
raw_fallback, observed 2026-08-10T21:03:21.191285Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.103708Z digest=sha256:11443e4a205b2279802ba43e098fa26edf76a8c92528e6eeec388daaeb0e7e86

Observation bc156b53-55de-4170-a519-ef72c1fc5d4a · outbound

This paper cites Genomics is failing on diversity.Nature, 538(7624):161–164, 2016.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Genomics is failing on diversity.Nature, 538(7624):161–164, 2016

Reference 34

Resolution
verified fuzzy
raw_fallback, observed 2026-08-10T21:03:21.160829Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.108901Z digest=sha256:c5c4d4a8d3efcb8c36ceac385c0226c478b1a63763f8c3c6f030c41ab1efd31c

Observation 06210258-7447-43bf-98a3-2cb526f705ba · outbound

This paper cites Machine learning predictions of mhc-ii specificities reveal alternative binding mode of class ii epitopes.Immunity, 56(6):1359–1375, 2023.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Machine learning predictions of mhc-ii specificities reveal alternative binding mode of class ii epitopes.Immunity, 56(6):1359–1375, 2023

Reference 35

Resolution
verified fuzzy
raw_fallback, observed 2026-08-10T21:03:21.127112Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.116904Z digest=sha256:44f8b0f181f7e873649dc8c464474085e63a69b6a6900c1a07c95aadccf44bba

Observation 8b23bbe1-1863-4db5-8b9b-05562fccf662 · outbound

This paper cites Robust prediction of hla class ii epitopes by deep motif deconvolution of immunopeptidomes.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Robust prediction of hla class ii epitopes by deep motif deconvolution of immunopeptidomes

Reference 36

Resolution
verified fuzzy
raw_fallback, observed 2026-08-10T21:03:21.107980Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.124624Z digest=sha256:d800c1f39b41cfd7d2c8ee8e51a5117cda7138a06ac0bc32ed100f54c037f71e

Observation fc217769-a3bf-49ac-81bd-25d28ac429ae · outbound

This paper cites Don't Trigger Me! A Triggerless Backdoor Attack Against Deep Neural Networks.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Don't Trigger Me! A Triggerless Backdoor Attack Against Deep Neural Networks

Reference 37

Resolution
unresolved
no resolver link, observed 2026-08-10T21:03:20.130726Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-10T21:03:20.130726Z digest=sha256:d5d34c08814f32330a11b09d5f5a947d77e1cbea86d7237036ca8c5ff9c14960

Observation d2b2fa27-3777-4696-a41b-292be151231b · outbound

This paper cites Mapping the pareto optimal design space for a functionally deimmunized biotherapeutic candidate.PLoS computational biology, 11(1):e1003988, 2015.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Mapping the pareto optimal design space for a functionally deimmunized biotherapeutic candidate.PLoS computational biology, 11(1):e1003988, 2015

Reference 38

Resolution
verified fuzzy
raw_fallback, observed 2026-08-10T21:03:21.088471Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.136577Z digest=sha256:fa4ef6aee8d88a220251c310b52378679fbb83e4b82afa900f61be691be5d8fe

Observation 503d2c47-8dd6-45e0-bd8d-428dbbb05be8 · outbound

This paper cites Macrel: antimicrobial peptide screening in genomes and metagenomes.PeerJ, 8:e10555, 2020.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Macrel: antimicrobial peptide screening in genomes and metagenomes.PeerJ, 8:e10555, 2020

Reference 39

Resolution
verified fuzzy
raw_fallback, observed 2026-08-10T21:03:21.069071Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.142845Z digest=sha256:5ead72a0ea37a69e59356b0407ffc272cd6a1d9f26be2aae83ec79c2baa0917e

Observation 9f883fce-3df0-4661-ba42-5e53ee11c8c2 · outbound

This paper cites Discovery of antimicrobial peptides in the global microbiome with machine learning.Cell, 187(14):3761–3778, 2024.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Discovery of antimicrobial peptides in the global microbiome with machine learning.Cell, 187(14):3761–3778, 2024

Reference 40

Resolution
verified fuzzy
raw_fallback, observed 2026-08-10T21:03:21.050294Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.149149Z digest=sha256:a8664917d068cdb66a9744ae9398aaa8e110659a56c4982727bb23f988104d66

Observation 3af50762-a2c8-4cdc-add1-43c0560b308a · outbound

This paper cites Population-specific design of de-immunized protein biotherapeutics.PLoS computational biology, 14(3):e1005983, 2018.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Population-specific design of de-immunized protein biotherapeutics.PLoS computational biology, 14(3):e1005983, 2018

Reference 41

Resolution
verified fuzzy
raw_fallback, observed 2026-08-10T21:03:21.030704Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.157101Z digest=sha256:d77dae85b0aa799dbfbaf20e48b29b0c4e17d5f4609a08c1f918ab3f4f604843

Observation a521b4d8-d982-4120-a1f1-bc5867425f3f · outbound

This paper cites an unresolved cited work.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Unresolved cited work

Reference 42

Resolution
unresolved
raw_fallback, observed 2026-08-10T21:03:21.001232Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.164744Z digest=sha256:4f96f62bab58cc4f3b89b2380542a007b19471358c6afdbb6b3f6a27c2ed0c10

Observation 95256d97-20db-42fd-9357-e02902570557 · outbound

This paper cites Mmseqs2 enables sensitive protein sequence searching for the analysis of massive data sets.Nature biotechnology, 35(11):1026–1028, 2017.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Mmseqs2 enables sensitive protein sequence searching for the analysis of massive data sets.Nature biotechnology, 35(11):1026–1028, 2017

Reference 43

Resolution
unresolved
no resolver link, observed 2026-08-10T21:03:20.173175Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-10T21:03:20.173175Z digest=sha256:d28f96372fc70f9ab97fd34e9455b53e448694ebe44a3e9c4c4352b7ab6c66d3

Observation 6a847807-2515-434c-b21d-9d1e8b1be04f · outbound

This paper cites Dis- covering highly potent antimicrobial peptides with deep generative model hydramp.Nature communications, 14(1):1453, 2023.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Dis- covering highly potent antimicrobial peptides with deep generative model hydramp.Nature communications, 14(1):1453, 2023

Reference 44

Resolution
verified fuzzy
raw_fallback, observed 2026-08-10T21:03:20.969763Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.179407Z digest=sha256:fb4821bc3bc230d4a6c38d221d0ab6ab8d7bffeb49360ca03c17aae1fdac881a

Observation 43d1c82d-d96e-48c8-ba07-ad167b0f3dc8 · outbound

This paper cites Dual use of artificial- intelligence-powered drug discovery.Nature machine intelligence, 4(3):189–191, 2022.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Dual use of artificial- intelligence-powered drug discovery.Nature machine intelligence, 4(3):189–191, 2022

Reference 45

Resolution
verified fuzzy
raw_fallback, observed 2026-08-10T21:03:20.940384Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.186980Z digest=sha256:655d6f6e302816be1b98104b370a3e37e71990cde4f2961a1b9f0315151329f4

Observation a3f3a7f2-3178-4e14-9d9e-0b289391a7a4 · outbound

This paper cites Deep generative models for peptide design.Digital Discovery, 1(3):195–208, 2022.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Deep generative models for peptide design.Digital Discovery, 1(3):195–208, 2022

Reference 46

Resolution
verified fuzzy
raw_fallback, observed 2026-08-10T21:03:20.897457Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.192644Z digest=sha256:444aef0dcc277cc732faf4508c4bde1a9e4effa787b7e2fdb6eed44a5f834db0

Observation 2db3a258-89da-4127-a6dd-fa0d39acad28 · outbound

This paper cites Backdoor Attacks on Discrete Graph Diffusion Models.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Backdoor Attacks on Discrete Graph Diffusion Models

Reference 47

Resolution
unresolved
no resolver link, observed 2026-08-10T21:03:20.198522Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-10T21:03:20.198522Z digest=sha256:a406998455ef70ac268c1db8c0f99b60e333df7f185f1af88cc751b83ad03f72

Observation 19a6fd7c-97e9-4283-aed4-a6f4bf53aecb · outbound

This paper cites Discovery of antimicrobial pep- tides with notable antibacterial potency by an llm-based foundation model.Science advances, 11(10):eads8932, 2025.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Discovery of antimicrobial pep- tides with notable antibacterial potency by an llm-based foundation model.Science advances, 11(10):eads8932, 2025

Reference 48

Resolution
verified fuzzy
raw_fallback, observed 2026-08-10T21:03:20.878394Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.203471Z digest=sha256:9a3df4f511932c95adecb4c9458cc656e48aafcb64f0db277f6118e0aab437ef

Observation 984740a4-a5a6-4a63-92f4-8a89f0045851 · outbound

This paper cites Strengthening nucleic acid biosecurity screening against generative protein design tools.Science, 390(6768):82–87, 2025.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Strengthening nucleic acid biosecurity screening against generative protein design tools.Science, 390(6768):82–87, 2025

Reference 49

Resolution
verified fuzzy
raw_fallback, observed 2026-08-10T21:03:20.851328Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.210257Z digest=sha256:a210e1e57b49f119c877559f1d0bb398b6e1f0df823263874072d9abed77edac

Observation 08c0b9ce-ee9e-499c-a2b0-a08f95c17876 · outbound

This paper cites GeneBreaker: Jailbreak Attacks against DNA Language Models with Pathogenicity Guidance.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models GeneBreaker: Jailbreak Attacks against DNA Language Models with Pathogenicity Guidance

Reference 50

Resolution
verified exact
local_arxiv, observed 2026-08-10T21:03:20.360294Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.217895Z digest=sha256:eff96ffd2fb7f7cc2cff888e8ce748ce20cad3809f61ac5905876be483e6aa5f

Observation 9ef9a2ca-fba4-4165-9408-7b98761e0a08 · outbound

This paper cites A Survey of Recent Backdoor Attacks and Defenses in Large Language Models.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models A Survey of Recent Backdoor Attacks and Defenses in Large Language Models

Reference 51

Resolution
unresolved
no resolver link, observed 2026-08-10T21:03:20.224424Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-10T21:03:20.224424Z digest=sha256:63f5567d9c54bffcc8e103ea6f88a84cfac52327560be5ede7a2324ea03698e9

Observation f3b3389b-49f0-4ea7-87e5-a5cd2421a32b · outbound

This paper cites an unresolved cited work.

Genotypic Triggers: Exposing Pharmacogenomic Blind Spots via Host-Specific Backdoors in Generative Antimicrobial Peptide Models Unresolved cited work

Reference 52

Resolution
unresolved
raw_fallback, observed 2026-08-10T21:03:20.826564Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-21T06:32:19.484+00:00.

source=pdf_text observed=2026-08-10T21:03:20.231752Z digest=sha256:02444106b2404049205d51a9379e851b33019989a83250ba8cd9cc5e34281223

Pith citing papers

No inbound Pith citation observations are available.