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Chemically active droplets in crowded environments

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arxiv 2505.11188 v1 pith:MPCZ2ZKS submitted 2025-05-16 cond-mat.soft physics.bio-ph

classification cond-mat.softphysics.bio-ph
keywords activechemicallydropletscellularenvironmentscondensatescrowdedcrowding
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Biomolecular condensates are essential for cellular organization and result from phase separation in systems far from thermodynamic equilibrium. Among various models, chemically active droplets play a significant role, consisting of proteins that switch between attractive and repulsive states via nonequilibrium chemical reactions. While field-based simulations have provided insights into their behavior, these coarse-grained approaches fail to capture molecular-scale effects, particularly in crowded cellular environments. Macromolecular crowding, a key feature of intracellular organization, strongly influences molecular transport within condensates, yet its quantitative impact remains underexplored. This study investigates the interplay between chemically active droplets and crowders by using particle-based models, that provide molecular insight, and a field-based model, that complements this picture. Surprisingly, crowding reduces droplet size while expanding the overall dense phase volume, challenging equilibrium-based expectations. This effect arises from the interplay between depletion interactions, diffusion hindrance, and nonequilibrium particle fluxes. Our findings provide a step towards a more comprehensive understanding of chemically active droplets in complex, realistic cellular environments.

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Cited by 2 Pith papers

Reviewed papers in the Pith corpus that reference this work. Sorted by Pith novelty score. Full citation record

  1. Metastable phase separation and information retrieval in multicomponent mixtures

    cond-mat.stat-mech 2025-09 conditional novelty 7.0 of 10

    Metastable phase-separated states in multicomponent liquids can store and retrieve compositional information, as shown in a Hopfield-liquid model with matching simulations.

  2. Depletion-Induced Interactions Modulate Nanoscale Protein Diffusion in Polymeric Crowder Solutions

    cond-mat.soft 2025-09 conditional novelty 6.0 of 10

    Ferritin diffusion in polymer crowder solutions follows a c*-normalized non-monotonic curve with a crossover near 2c*, attributed to depletion-induced intermediate-range order that bulk viscosity cannot explain.

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