SurfDesign introduces surface-conditioned protein design via manifold modeling and equivariant message passing on surfaces integrated with pretrained language models, outperforming prior methods on binder and enzyme design benchmarks.
Reinforcement learning on structure-conditioned categorical diffusion for protein inverse folding
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SGRPO is a GRPO-style framework that constructs set-level diversity rewards via supergroup sampling and leave-one-out redistribution to expand the utility-diversity Pareto frontier in biomolecular design tasks.
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SurfDesign: Effective Protein Design on Molecular Surfaces
SurfDesign introduces surface-conditioned protein design via manifold modeling and equivariant message passing on surfaces integrated with pretrained language models, outperforming prior methods on binder and enzyme design benchmarks.
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Pushing Biomolecular Utility-Diversity Frontiers with Supergroup Relative Policy Optimization
SGRPO is a GRPO-style framework that constructs set-level diversity rewards via supergroup sampling and leave-one-out redistribution to expand the utility-diversity Pareto frontier in biomolecular design tasks.