Structural identifiability analysis shows point sources restore identifiability for inferring spatial stochastic dynamics parameters from static snapshots, unlike distributed sources, with limits depending on modeling choices.
Physics-Informed Neural Networks for Biological $2\mathrm{D}{+}t$ Reaction-Diffusion Systems
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abstract
Physics-informed neural networks (PINNs) provide a powerful framework for learning governing equations of dynamical systems from data. Biologically-informed neural networks (BINNs) are a variant of PINNs that preserve the known differential operator structure (e.g., reaction-diffusion) while learning constitutive terms via trainable neural subnetworks, enforced through soft residual penalties. Existing BINN studies are limited to $1\mathrm{D}{+}t$ reaction-diffusion systems and focus on forward prediction, using the governing partial differential equation as a regulariser rather than an explicit identification target. Here, we extend BINNs to $2\mathrm{D}{+}t$ systems within a PINN framework that combines data preprocessing, BINN-based equation learning, and symbolic regression post-processing for closed-form equation discovery. We demonstrate the framework's real-world applicability by learning the governing equations of lung cancer cell population dynamics from time-lapse microscopy data, recovering $2\mathrm{D}{+}t$ reaction-diffusion models from experimental observations. The proposed framework is readily applicable to other spatio-temporal systems, providing a practical and interpretable tool for fast analytic equation discovery from data.
fields
q-bio.QM 1years
2026 1verdicts
UNVERDICTED 1representative citing papers
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Identifiability Limits of Physics-Informed Inference for Spatial Stochastic Dynamics from Static Snapshots
Structural identifiability analysis shows point sources restore identifiability for inferring spatial stochastic dynamics parameters from static snapshots, unlike distributed sources, with limits depending on modeling choices.