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arxiv: cond-mat/9708158 · v1 · submitted 1997-08-21 · ❄️ cond-mat.soft · q-bio.BM

Torsional Directed Walks, Entropic Elasticity, and DNA Twist Stiffness

classification ❄️ cond-mat.soft q-bio.BM
keywords stiffnesstorsionaldirectedtwistwalkclassicaldataexperimental
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DNA and other biopolymers differ from classical polymers due to their torsional stiffness. This property changes the statistical character of their conformations under tension from a classical random walk to a problem we call the `torsional directed walk'. Motivated by a recent experiment on single lambda-DNA molecules [Strick et al., Science 271 (1996) 1835], we formulate the torsional directed walk problem and solve it analytically in the appropriate force regime. Our technique affords a direct physical determination of the microscopic twist stiffness C and twist-stretch coupling D relevant for DNA functionality. The theory quantitatively fits existing experimental data for relative extension as a function of overtwist over a wide range of applied force; fitting to the experimental data yields the numerical values C=120nm and D=50nm. Future experiments will refine these values. We also predict that the phenomenon of reduction of effective twist stiffness by bend fluctuations should be testable in future single-molecule experiments, and we give its analytic form.

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