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Deep Bidirectional Language-Knowledge Graph Pretraining
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Pretraining a language model (LM) on text has been shown to help various downstream NLP tasks. Recent works show that a knowledge graph (KG) can complement text data, offering structured background knowledge that provides a useful scaffold for reasoning. However, these works are not pretrained to learn a deep fusion of the two modalities at scale, limiting the potential to acquire fully joint representations of text and KG. Here we propose DRAGON (Deep Bidirectional Language-Knowledge Graph Pretraining), a self-supervised approach to pretraining a deeply joint language-knowledge foundation model from text and KG at scale. Specifically, our model takes pairs of text segments and relevant KG subgraphs as input and bidirectionally fuses information from both modalities. We pretrain this model by unifying two self-supervised reasoning tasks, masked language modeling and KG link prediction. DRAGON outperforms existing LM and LM+KG models on diverse downstream tasks including question answering across general and biomedical domains, with +5% absolute gain on average. In particular, DRAGON achieves notable performance on complex reasoning about language and knowledge (+10% on questions involving long contexts or multi-step reasoning) and low-resource QA (+8% on OBQA and RiddleSense), and new state-of-the-art results on various BioNLP tasks. Our code and trained models are available at https://github.com/michiyasunaga/dragon.
Forward citations
Cited by 3 Pith papers
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Improving Biomedical Knowledge Graph Quality: A Community Approach
Applying a 28-item scorecard to 16 biomedical knowledge graphs shows most lack versioning, provenance, and licensing details; only RTX-KG2 passed every check.
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Biomedical Knowledge Graph: A Survey of Domains, Tasks, and Real-World Applications
A broad survey that organizes biomedical knowledge graphs into domains, tasks, and applications, with tables of databases, graphs, and tools.
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Thinking with Knowledge Graphs: Enhancing LLM Reasoning Through Structured Data
Representing knowledge graph triples as Python code improved LLM multi-hop reasoning accuracy over text and JSON in this study, though the effect is modest and possibly due to explicit inference steps in the code.
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