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arxiv: 2311.17640 · v3 · pith:AN6ISWH6 · submitted 2023-11-29 · q-bio.BM

Community recommendations on cryoEM data archiving and validation

Gerard J. Kleywegt , Paul D. Adams , Sarah J. Butcher , Cathy Lawson , Alexis Rohou , Peter B. Rosenthal , Sriram Subramaniam , Maya Topf
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Sanja Abbott Philip R. Baldwin John M. Berrisford G\'erard Bricogne Preeti Choudhary Tristan I. Croll Radostin Danev Sai J. Ganesan Timothy Grant Aleksandras Gutmanas Richard Henderson J. Bernard Heymann Juha T. Huiskonen Andrei Istrate Takayuki Kato Gabriel C. Lander Shee-Mei Lok Steven J. Ludtke Garib N. Murshudov Ryan Pye Grigore D. Pintilie Jane S. Richardson Carsten Sachse Osman Salih Sjors H.W. Scheres Gunnar F. Schroeder Carlos Oscar S. Sorzano Scott M. Stagg Zhe Wang Rangana Warshamanage John D. Westbrook Martyn D. Winn Jasmine Y. Young Stephen K. Burley Jeffrey C. Hoch Genji Kurisu Kyle Morris Ardan Patwardhan Sameer Velankar
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classification q-bio.BM
keywords datarecommendationsvalidationworkshoparchivingcryoemsomestructures
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In January 2020, a workshop was held at EMBL-EBI (Hinxton, UK) to discuss data requirements for deposition and validation of cryoEM structures, with a focus on single-particle analysis. The meeting was attended by 45 experts in data processing, model building and refinement, validation, and archiving of such structures. This report describes the workshop's motivation and history, the topics discussed, and consensus recommendations resulting from the workshop. Some challenges for future methods-development efforts in this area are also highlighted, as is the implementation to date of some of the recommendations.

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