Pith. sign in

Paper Citation Record · LEDGER

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration

As of 8 August 2026, this Paper Citation Record lists 57 of 57 outbound references and 1 inbound Pith citation observation for arXiv:2508.21468.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2508.21468 v1

Coverage vector

measured 57 of 57 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-05T14:25:31.339421Z

measured 58 of 58 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-08T06:32:00.761636+00:00

measured 1 of 1 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-06-28T15:56:09.312666Z

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: arxiv_reference, observed 2026-07-01T21:56:16.227901Z

Reference resolution

57 of 57 outbound references displayed

  • verified exact2
  • verified fuzzy38
  • unresolved16
  • parse uncertain0
  • malformed identifier1
  • metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation a3d9517c-6948-408d-8383-7af5eb2e1754 · outbound

This paper cites Accurate structure prediction of biomolecular interactions with alphafold 3.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Accurate structure prediction of biomolecular interactions with alphafold 3

Reference 1

Resolution
unresolved
no resolver link, observed 2026-08-05T14:25:26.514834Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-05T14:25:26.514834Z digest=sha256:b4fc0929cc01410c353664ff8ad97f6985a1863b56630a9fdb3e16f37f42ef04

Observation 4bacf021-a84d-40a9-9ea6-43e7e510f6ef · outbound

This paper cites Protein sequence modelling with bayesian flow networks.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Protein sequence modelling with bayesian flow networks

Reference 2

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.922485Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:26.556675Z digest=sha256:4918348cd9161ae2b73c7e600a0d9136fd85e6fe5d00e0e130f4234165c11a91

Observation 3c3e4d77-9c29-4f60-b393-0b2981d5b957 · outbound

This paper cites Geometric deep learning methods and applications in 3d structure-based drug design.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Geometric deep learning methods and applications in 3d structure-based drug design

Reference 3

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.910875Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:26.619168Z digest=sha256:a038ccaafc7125ef465492dee30a91433fb4c5538fa2c0069117710efb18e7bb

Observation 318f2416-f1ab-4dc7-a27b-fe65ae3fcb43 · outbound

This paper cites Equivariant Energy-Guided SDE for Inverse Molecular Design.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Equivariant Energy-Guided SDE for Inverse Molecular Design

Reference 4

Resolution
unresolved
no resolver link, observed 2026-08-05T14:25:26.697348Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-05T14:25:26.697348Z digest=sha256:f1501467063b9768b6534482e80175113cf817a5d4fa05a3004c298204c417b8

Observation b6f900e0-c1be-483d-9404-e370738b467c · outbound

This paper cites Posebusters: Ai-based docking methods fail to generate physically valid poses or generalise to novel sequences.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Posebusters: Ai-based docking methods fail to generate physically valid poses or generalise to novel sequences

Reference 5

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.899307Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:26.763247Z digest=sha256:a95dfa14e09168c46bf5b2fbad3d5b02e8856a8f51a6f3a4d0b31edb4d50f044

Observation 98ef91fa-49af-4542-ba35-b0d28b6a0347 · outbound

This paper cites Pid- iff: Physics informed diffusion model for protein pocket-specific 3d molecular generation.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Pid- iff: Physics informed diffusion model for protein pocket-specific 3d molecular generation

Reference 6

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.888082Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:26.841297Z digest=sha256:ce07778c1e33ce6a375cd84b1ad97054fa0ac26affd19347bf0c459ac4196989

Observation 179abc6c-775e-479d-be29-aaa145361f06 · outbound

This paper cites Diffusion posterior sampling for general noisy inverse problems.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Diffusion posterior sampling for general noisy inverse problems

Reference 7

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.877398Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:26.929990Z digest=sha256:e2bb7860f5039fd85ac6af0abcad94fd2938f69d3df1366bc9fa30c8ccf8ab17

Observation af2d385f-5358-4730-b16c-36437d9eadde · outbound

This paper cites Uniprot: a worldwide hub of protein knowledge.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Uniprot: a worldwide hub of protein knowledge

Reference 8

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.865764Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:27.024445Z digest=sha256:8ab691730a954f7e06afb387d05d9cb08b39c89f1faca9b855862d0d69e119eb

Observation c0fac689-af22-4d48-a0e8-9f515df84aca · outbound

This paper cites Multi-parameter optimization: identifying high quality compounds with a balance of properties.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Multi-parameter optimization: identifying high quality compounds with a balance of properties

Reference 9

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.855286Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:27.089396Z digest=sha256:5959f416cafb05f0a3c57c7e0ccf32a851681993b0ebbf0461b3d7996034e934

Observation 0e59f98b-a02c-401a-a85e-691f2e72b2bf · outbound

This paper cites Comprehensive analysis of kinase inhibitor selectivity.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Comprehensive analysis of kinase inhibitor selectivity

Reference 10

Resolution
unresolved
no resolver link, observed 2026-08-05T14:25:27.169773Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-05T14:25:27.169773Z digest=sha256:c51265265521baf4816df12631ecd9259a83c85f9e939fc2aa78b1ff8b4b9f45

Observation c7ffd768-1954-40ef-875c-57ba0bdf8751 · outbound

This paper cites Diffusion models beat gans on image synthesis.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Diffusion models beat gans on image synthesis

Reference 11

Resolution
unresolved
no resolver link, observed 2026-08-05T14:25:27.249667Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-05T14:25:27.249667Z digest=sha256:1386ab61287711bc4f8032879e10f2759b86eda37bf3a4a0882de1fd011e91d8

Observation 3ab3b6be-f575-469d-9570-4c93c09096df · outbound

This paper cites Autodock vina 1.2.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Autodock vina 1.2

Reference 12

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.830458Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:27.314201Z digest=sha256:fdd4f40e49cd5b862d663b1c310704187b30b07c077a5f1d00f904e8ea98dfbe

Observation 3de22a8b-2936-4993-9244-d8ede7f5e13b · outbound

This paper cites Tweedie’s formula and selection bias.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Tweedie’s formula and selection bias

Reference 13

Resolution
unresolved
no resolver link, observed 2026-08-05T14:25:27.398826Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-05T14:25:27.398826Z digest=sha256:25caf3dc87b6903796ac51234aa409e093acaccc29b1955cae202af3a2e9f885

Observation c622c464-ec52-495b-8f13-9ebf3428af75 · outbound

This paper cites Estimation of synthetic accessibility score of drug-like molecules based on molecular complexity and fragment contributions.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Estimation of synthetic accessibility score of drug-like molecules based on molecular complexity and fragment contributions

Reference 14

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.812408Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:27.486828Z digest=sha256:5901d643b6d4d3978008a96dbd59d5028939318e1823cc6c87ce2f11f8522d1b

Observation bff8ed79-5779-4a2b-ae68-5aabff2e0276 · outbound

This paper cites Three-dimensional convolutional neural networks and a cross- docked data set for structure-based drug design.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Three-dimensional convolutional neural networks and a cross- docked data set for structure-based drug design

Reference 15

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.801989Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:27.553098Z digest=sha256:a27b8515cc5bffcd7da5a11f3b0163701f4ddaa406d7e1b798c5635f5a323d58

Observation 4c77817e-4aab-46b8-a2e1-7ca8182d21d2 · outbound

This paper cites Reinforced genetic algorithm for structure-based drug design.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Reinforced genetic algorithm for structure-based drug design

Reference 16

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.791132Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:27.630009Z digest=sha256:50e0cdfbcdb2aee569f5cb98e96491488d1fa791864b291f7e19c2db7699161e

Observation 46b43fad-9298-4ff8-82d9-b140a20dca0f · outbound

This paper cites Rethinking Specificity in SBDD: Leveraging Delta Score and Energy-Guided Diffusion.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Rethinking Specificity in SBDD: Leveraging Delta Score and Energy-Guided Diffusion

Reference 17

Resolution
unresolved
no resolver link, observed 2026-08-05T14:25:27.708522Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-05T14:25:27.708522Z digest=sha256:02c32386717b1ba64e1fba0bf153a24b23f03524df9479180305fae1372b839a

Observation 5ca183c5-1d0b-49a6-9a86-257db7286feb · outbound

This paper cites Bayesian Flow Networks.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Bayesian Flow Networks

Reference 18

Resolution
unresolved
no resolver link, observed 2026-08-05T14:25:27.775723Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-05T14:25:27.775723Z digest=sha256:1b572cafe935d4a411cb843c06d2247cdfb7eb826661a71d9a09b02deb1beefe

Observation 7e09d8f5-750d-4f95-8920-39a1015a8a24 · outbound

This paper cites Aligning target-aware molecule diffusion models with exact energy optimization.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Aligning target-aware molecule diffusion models with exact energy optimization

Reference 19

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.781390Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:27.893286Z digest=sha256:14fc797d3cfe0dddded69ff68a407a0998620c8c613e7cd340fdcb2f65c13c4a

Observation a3d6ecd8-53b9-496b-b6e8-8a0fdb310be9 · outbound

This paper cites 3D Equivariant Diffusion for Target-Aware Molecule Generation and Affinity Prediction.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration 3D Equivariant Diffusion for Target-Aware Molecule Generation and Affinity Prediction

Reference 20

Resolution
unresolved
no resolver link, observed 2026-08-05T14:25:27.970113Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-05T14:25:27.970113Z digest=sha256:d5b9715b112880bb2978a810d1de383b50720c87827fb5b06b288ef403fc45f4

Observation 9feb90b4-d6d5-4e3b-bcb0-1fcb0e07f3b5 · outbound

This paper cites DecompDiff: Diffusion Models with Decomposed Priors for Structure-Based Drug Design.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration DecompDiff: Diffusion Models with Decomposed Priors for Structure-Based Drug Design

Reference 21

Resolution
unresolved
no resolver link, observed 2026-08-05T14:25:28.012501Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-05T14:25:28.012501Z digest=sha256:05a46c33dda75f42ea5adb764a04fa6d8b8f3b12e59773d6a75650d365087703

Observation a5feea8d-7175-412c-8958-6aea03dbb2fa · outbound

This paper cites Gradient Guidance for Diffusion Models: An Optimization Perspective.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Gradient Guidance for Diffusion Models: An Optimization Perspective

Reference 22

Resolution
unresolved
no resolver link, observed 2026-08-05T14:25:28.120881Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-05T14:25:28.120881Z digest=sha256:f21218401879ab241d39ed87321ae2f7d80a4cce58cc56d3089c116fd8ab1bcc

Observation 2060369a-838e-4dec-addc-4ecf849b793b · outbound

This paper cites Training- free multi-objective diffusion model for 3d molecule generation.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Training- free multi-objective diffusion model for 3d molecule generation

Reference 23

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.771796Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:28.182243Z digest=sha256:3807dcfcf6d38bd8b21bb1157de9d0e09c049f112ef34d499d36efb1054f3674

Observation a9931f27-b7e7-4b53-a45f-e4ee13bdd8e7 · outbound

This paper cites Posecheck: Generative models for 3d structure-based drug design produce unrealistic poses.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Posecheck: Generative models for 3d structure-based drug design produce unrealistic poses

Reference 24

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.760442Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:28.248770Z digest=sha256:417e6488b541d5b40ad87189235eb1773706b8304b451ea8be6a4b7fbfd9bd88

Observation 5057ed33-0ed7-42bc-8f74-c7608534345a · outbound

This paper cites Protein-ligand interaction prior for binding- aware 3d molecule diffusion models.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Protein-ligand interaction prior for binding- aware 3d molecule diffusion models

Reference 25

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.749542Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:28.344035Z digest=sha256:77cbaf7a9d624ea43675d6ae83f876a09439bdb60441337b070b834c0982fd38

Observation f95ea69a-eb56-4cd1-9aad-f8871d8cf413 · outbound

This paper cites Rational approaches to improving selectivity in drug design.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Rational approaches to improving selectivity in drug design

Reference 26

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.739050Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:28.479751Z digest=sha256:0ef60bd7cc6eec7bbb34d2c6d0dea45e9b92b828fd441e3a56181cb682bf6a64

Observation dfb58398-b767-4cc3-b3ca-7dd20043e546 · outbound

This paper cites A quantitative analysis of kinase inhibitor selectivity.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration A quantitative analysis of kinase inhibitor selectivity

Reference 27

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.726398Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:28.561654Z digest=sha256:4bab2d84f7fdc66a16450d981ebb2099a5f007d1e993c63fcda13e9b98ff1e67

Observation 417424e6-728b-4418-a579-dab5d851a69b · outbound

This paper cites Noise2score: tweedie’s approach to self-supervised image denoising without clean images.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Noise2score: tweedie’s approach to self-supervised image denoising without clean images

Reference 28

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.714270Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:28.686863Z digest=sha256:990b1d9cc6b5ce8ef52dbc75f80e791b09245d35bf964030bbd423e76396d8d6

Observation aedf26a6-bb0f-469d-9893-d5dd626fa00b · outbound

This paper cites Recent developments in structure-based drug design.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Recent developments in structure-based drug design

Reference 29

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.703934Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:28.816716Z digest=sha256:8bd782555de04b5c401e439914243e670aeb8fd87bb46ba3e699fa9370404a5b

Observation 80d40693-b026-462e-84f1-9895cea71a9e · outbound

This paper cites Lessons learned in empirical scoring with smina from the csar 2011 benchmarking exercise.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Lessons learned in empirical scoring with smina from the csar 2011 benchmarking exercise

Reference 30

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.693739Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:28.931506Z digest=sha256:0997209c3e17ceeb4d3ee7c3742016538791be4d6db07ee91c0f3a919830f25f

Observation 78adbec1-0a09-401d-832d-bd35e2329254 · outbound

This paper cites A 3d generative model for structure-based drug design.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration A 3d generative model for structure-based drug design

Reference 31

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.683320Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:29.043798Z digest=sha256:cb2240c245f67e189a0ca158376658974c320a7516e7ab044c80386a022747a0

Observation 76804ed2-7673-4633-aa5f-1b54f711b2a4 · outbound

This paper cites Gnina 1.0: molecular docking with deep learning.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Gnina 1.0: molecular docking with deep learning

Reference 32

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.673382Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:29.127500Z digest=sha256:5e87ac9db19ca88c73e309432f5c90b706f2411a74d97cf3c456ef63a1c254c8

Observation b03e1972-15a5-48d2-992e-ec8d8ccbcd94 · outbound

This paper cites 3d molecule generation by denoising voxel grids.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration 3d molecule generation by denoising voxel grids

Reference 33

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.661728Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:29.215327Z digest=sha256:ba00994c8c63ad6c19a0814822998c6d08c71ad1fc255150369ae928fa4a31a8

Observation 303244e1-558e-445b-8f24-694736762545 · outbound

This paper cites Pocket2mol: Efficient molecular sampling based on 3d protein pockets.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Pocket2mol: Efficient molecular sampling based on 3d protein pockets

Reference 34

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.608080Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:29.285907Z digest=sha256:ed311f921ac136dd41ce3024e9bccc7df29c6ff9c4d21550889de0d8c3f8e399

Observation a3b8f302-f1bd-46a0-82f8-b76b8c1bb878 · outbound

This paper cites MolDiff: Addressing the Atom-Bond Inconsistency Problem in 3D Molecule Diffusion Generation.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration MolDiff: Addressing the Atom-Bond Inconsistency Problem in 3D Molecule Diffusion Generation

Reference 35

Resolution
unresolved
no resolver link, observed 2026-08-05T14:25:29.394587Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-05T14:25:29.394587Z digest=sha256:db6066c1fbf4bd9f4ad540fda21184fe634c977248cb9a1889ecd6397396ad96

Observation 9bb84b3e-45aa-43dc-be7c-b462c49d6638 · outbound

This paper cites Geometric deep learning for structure-based ligand design.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Geometric deep learning for structure-based ligand design

Reference 36

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.419346Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:29.483161Z digest=sha256:1b8b6b14de607e22b822b40dd743484d93277b210c359afd282e74ce32cfda7a

Observation 7229f47d-e83e-4b4f-9ddb-0d06fc7db79a · outbound

This paper cites Molcraft: Structure-based drug design in continuous parameter space.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Molcraft: Structure-based drug design in continuous parameter space

Reference 37

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.243750Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:29.597946Z digest=sha256:e9d49076b31378d20b6f894be87a10daec202cc1b6a619adb21cbb64f8a308f2

Observation 40e7c504-d5ca-44ff-bb22-caf082a2701b · outbound

This paper cites Generating 3d molecules con- ditional on receptor binding sites with deep generative models.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Generating 3d molecules con- ditional on receptor binding sites with deep generative models

Reference 38

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:35.043630Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:29.675003Z digest=sha256:5bc53a844473e40c64b0ced38281090c176e6012e33db00a6ae4564063c9019f

Observation 539b5194-2d31-4058-896d-677fa4aba21d · outbound

This paper cites Structure-based drug design with equivariant diffusion models, 2023.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Structure-based drug design with equivariant diffusion models, 2023

Reference 39

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:34.748192Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:29.751063Z digest=sha256:55b1cbd5e4ae41c549fd76212ed7e1fa3cdbc96aae69813dfae469e3b74f3ed3

Observation 916f60f3-f3d0-4a6a-9a44-818136a284f7 · outbound

This paper cites Structure-based drug design with equivariant diffusion models.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Structure-based drug design with equivariant diffusion models

Reference 40

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:34.474999Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:29.817784Z digest=sha256:bd08b1b063a84362ca01a129f4eac57efbd9baa81469953256181b00f9465378

Observation 80e0e365-2cc7-4269-af1e-7514071941a0 · outbound

This paper cites On the Pitfalls of Heteroscedastic Uncertainty Estimation with Probabilistic Neural Networks.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration On the Pitfalls of Heteroscedastic Uncertainty Estimation with Probabilistic Neural Networks

Reference 41

Resolution
unresolved
no resolver link, observed 2026-08-05T14:25:29.931810Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-05T14:25:29.931810Z digest=sha256:e087dab687d2d52ae2e96c29b64610264337c575b7924ac2a336a4c8b8adb6db

Observation 1b4e9a2e-f68c-40de-93cf-2055dd84b713 · outbound

This paper cites Tacogfn: Target-conditioned gflownet for structure-based drug design.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Tacogfn: Target-conditioned gflownet for structure-based drug design

Reference 42

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:34.226009Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:30.047436Z digest=sha256:24e58203497be0a7b36c6ad984a14594bd9d1b2309cbfb6f60422d10ea6b96e6

Observation 0a13d31b-cfbb-42b0-a166-11c282b495d3 · outbound

This paper cites TacoGFN: Target-conditioned GFlowNet for Structure-based Drug Design.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration TacoGFN: Target-conditioned GFlowNet for Structure-based Drug Design

Reference 43

Resolution
verified exact
local_arxiv, observed 2026-08-05T14:25:31.729773Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:30.149222Z digest=sha256:9fb5a0745dd76ee1003e5d7e7671e1bc8a11ccbc3e9597f4fc5c6ffccd7d4932

Observation 95c506fb-3ed8-416f-80e4-08e8f1cb836f · outbound

This paper cites From target to drug: generative modeling for the multimodal structure-based ligand design.Molecular pharmaceutics, 16(10):4282–4291, 2019.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration From target to drug: generative modeling for the multimodal structure-based ligand design.Molecular pharmaceutics, 16(10):4282–4291, 2019

Reference 44

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:34.031008Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:30.244844Z digest=sha256:1f9bb572e17fb1ba8ac5a36a1752a4ad322b72f89a272384ed92f91f818e5780

Observation 496a8d85-c63e-467f-a53e-0a3d90e1669c · outbound

This paper cites Score-Based Generative Modeling through Stochastic Differential Equations.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Score-Based Generative Modeling through Stochastic Differential Equations

Reference 45

Resolution
unresolved
no resolver link, observed 2026-08-05T14:25:30.313220Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-05T14:25:30.313220Z digest=sha256:30674baf1bb3cb7b90ca33e1294ff64f84b37d5babd54b0401b839664818cf81

Observation 8e59c6ef-d98c-4cb6-a9ba-0f55e3d0338d · outbound

This paper cites Unified generative modeling of 3d molecules with bayesian flow networks.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Unified generative modeling of 3d molecules with bayesian flow networks

Reference 46

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:33.873781Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:30.394275Z digest=sha256:eab3641b9de29cdfe6df7d6caa63403df1e5f484ac1b6b4eecfc8576da96d29d

Observation d1a15dbc-e954-4b4f-b6c3-59c202c6162e · outbound

This paper cites Selective optimization of side activities: another way for drug discovery.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Selective optimization of side activities: another way for drug discovery

Reference 47

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:33.689922Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:30.529703Z digest=sha256:9a449c3e80d2f020f7a60c9459212f7758ee83dde823d19488b41825087f8a72

Observation 61daa666-f283-4118-8a0d-e766d873e290 · outbound

This paper cites Learning subpocket prototypes for generalizable structure-based drug design.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Learning subpocket prototypes for generalizable structure-based drug design

Reference 48

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:33.508353Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:30.627743Z digest=sha256:a23608c47c22e9fe3643c3fb0a8bdf16978c493ece88af4e8a176d18afa038e6

Observation e3e189fc-c547-47ab-b1ad-4794fd956ab3 · outbound

This paper cites Molecule generation for target pro- tein binding with structural motifs.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Molecule generation for target pro- tein binding with structural motifs

Reference 49

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:33.348023Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:30.699013Z digest=sha256:72536208bca1fafb1f59335c2e0671e687f7dcf96266fe4a91d9561bf8278b09

Observation 6fe4ccaf-4330-442b-ad39-5d0e1bbf8f94 · outbound

This paper cites Geometric Deep Learning for Structure-Based Drug Design: A Survey.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Geometric Deep Learning for Structure-Based Drug Design: A Survey

Reference 50

Resolution
verified exact
local_arxiv, observed 2026-08-05T14:25:31.511955Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:30.791122Z digest=sha256:fa5c0549f7aeec43633bddb546cbeeacaac77bc7e73b8a0b230d42256b8cb89d

Observation 473074fa-b053-4931-abec-30281d4c7a75 · outbound

This paper cites known unknown.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration known unknown

Reference 51

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:33.150214Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:30.895618Z digest=sha256:9e4df96b0be41d526bb152b693a3246be4f0cb92a9071d6a73ed9dd59a961cd4

Observation 637c19c6-7dac-4ef8-8266-19a9b8d8e8d3 · outbound

This paper cites an unresolved cited work.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Unresolved cited work

Reference 52

Resolution
unresolved
raw_fallback, observed 2026-08-05T14:25:32.974261Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:30.963695Z digest=sha256:f1f7faa41869ebe885d2869d57e0ca9e26ea1313e8e68d9a3779214e12159e23

Observation b0d98ba8-6690-423c-a925-0a37e10522d4 · outbound

This paper cites an unresolved cited work.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Unresolved cited work

Reference 53

Resolution
unresolved
raw_fallback, observed 2026-08-05T14:25:32.799964Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:31.071125Z digest=sha256:ab64e4ad8be86a8b9d4e2fbe949d426b5b4a6ecf28f51bf07f1af0ceeab132c7

Observation fdf75671-3e8e-4701-8255-57d0eea07636 · outbound

This paper cites Here h(θi−1, yi, αi) computes the posterior parameter after observing yi with precision αi, given the prior θi−1.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Here h(θi−1, yi, αi) computes the posterior parameter after observing yi with precision αi, given the prior θi−1

Reference 54

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:32.571158Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:31.149120Z digest=sha256:c47fc29ba4d68a31ccbb43cbce11aa82a48603e10eb66ee76f87c62d7e96f9c2

Observation 5c10dfd4-1644-4947-af80-d0435e69b56d · outbound

This paper cites In contrast, diffusion models explicitly add random noise to samples at each step to maintain stochasticity.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration In contrast, diffusion models explicitly add random noise to samples at each step to maintain stochasticity

Reference 55

Resolution
verified fuzzy
raw_fallback, observed 2026-08-05T14:25:32.356065Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:31.223917Z digest=sha256:ea9ad546adf2f6221461ae1576163d7f7493ca8d0b282f4436bcc1b3d828b613

Observation 66be65b3-41ec-4830-943a-e9d2bffc65f8 · outbound

This paper cites an unresolved cited work.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Unresolved cited work

Reference 56

Resolution
unresolved
raw_fallback, observed 2026-08-05T14:25:32.178924Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:31.300974Z digest=sha256:4b14f43d67ca8929cd13634430e3300cadfa31b95c52750052fc8140b15c7f81

Observation 36b354fe-8d4c-4f37-8624-acd9b4bddcb7 · outbound

This paper cites Only Generation Type.

Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration Only Generation Type

Reference 57

Resolution
malformed identifier
raw_fallback, observed 2026-08-05T14:25:31.976708Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-05T14:25:31.339421Z digest=sha256:5c4795296fc35009162b44b29f78c1d730f1f87565dccfd1f061afab7b33a88b

Pith citing papers

Observation d5d78610-e890-4564-870e-e67b5c4030ad · inbound

Uncertainty-Calibrated Diffusion for Reliable 3D Molecular Graph Generation cites this paper.

Uncertainty-Calibrated Diffusion for Reliable 3D Molecular Graph Generation Controllable 3D Molecular Generation for Structure-Based Drug Design Through Bayesian Flow Networks and Gradient Integration

Reference 7

Resolution
verified exact
arxiv_id, observed 2026-07-01T21:56:16.229264Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-06-28T15:56:09.312666Z digest=sha256:48b8c5f445c6c8d52dc5a9944855af05f92075277a7ad7d416c8e7ce7cae0dc5