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arxiv: q-bio/0603018 · v1 · submitted 2006-03-17 · 🧬 q-bio.BM

Protein folding in a force-clamp

classification 🧬 q-bio.BM
keywords foldingforce-clampproteincomparedcomparisondemonstratedistancedistinct
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Kinetics of folding of a protein held in a force-clamp are compared to an unconstrained folding. The comparison is made within a simple topology-based dynamical model of ubiquitin. We demonstrate that the experimentally observed variations in the end-to-end distance reflect microscopic events during folding. However, the folding scenarios in and out of the force-clamp are distinct.

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