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arxiv 2306.15113 v1 pith:ILSQJQLT submitted 2023-06-26 q-bio.OT

Minimum information and guidelines for reporting a Multiplexed Assay of Variant Effect

classification q-bio.OT
keywords dataeffectinformationmaveminimummultiplexedvariantacross
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Multiplexed Assays of Variant Effect (MAVEs) have emerged as a powerful approach for interrogating thousands of genetic variants in a single experiment. The flexibility and widespread adoption of these techniques across diverse disciplines has led to a heterogeneous mix of data formats and descriptions, which complicates the downstream use of the resulting datasets. To address these issues and promote reproducibility and reuse of MAVE data, we define a set of minimum information standards for MAVE data and metadata and outline a controlled vocabulary aligned with established biomedical ontologies for describing these experimental designs.

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