Donaldson-Thomas Transformation of Double Bruhat Cells in General Linear Groups

Kontsevich and Soibelman defined the Donaldson-Thomas invariants of a 3d Calabi-Yau category with a stability condition. Any cluster variety can produce an example of such a category, whose corresponding Donaldson-Thomas invariants are encoded by a special formal automorphism of the cluster variety, known as the Donaldson-Thomas transformation. In this paper we prove a conjecture of Goncharov and Shen in the case of $\mathrm{GL}_n$, which describes the Donaldson-Thomas transformation of the double quotient of the double Bruhat cells $H \backslash \mathrm{GL}_n^{u,v}/H$ where $H$ is a maximal torus, as a certain explicit cluster transformation related to Fomin-Zelevinsky's twist map. Our result, combined with the work of Gross, Hacking, Keel, and Kontsevich, proves the duality conjecture of Fock and Goncharov in the case of $H\backslash \mathrm{GL}_n^{u,v}/H$.