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arxiv: 1610.09536 · v2 · pith:KY2C3RNBnew · submitted 2016-10-29 · 🧬 q-bio.SC · physics.bio-ph· q-bio.BM· q-bio.NC

Stochastic single-molecule dynamics of synaptic membrane protein domains

classification 🧬 q-bio.SC physics.bio-phq-bio.BMq-bio.NC
keywords synapticdomainsmembraneproteinsingle-moleculestochasticdynamicsobserved
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Motivated by single-molecule experiments on synaptic membrane protein domains, we use a stochastic lattice model to study protein reaction and diffusion processes in crowded membranes. We find that the stochastic reaction-diffusion dynamics of synaptic proteins provide a simple physical mechanism for collective fluctuations in synaptic domains, the molecular turnover observed at synaptic domains, key features of the single-molecule trajectories observed for synaptic proteins, and spatially inhomogeneous protein lifetimes at the cell membrane. Our results suggest that central aspects of the single-molecule and collective dynamics observed for membrane protein domains can be understood in terms of stochastic reaction-diffusion processes at the cell membrane.

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