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Every paper Pith has read. Search by title, abstract, or pith.
46 papers in q-bio.TO · page 1
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Genetic algorithms extract breast ROIs from thermograms automatically
ROI Extraction in Thermographic Breast Images Using Genetic Algorithms
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Prototypes and pathways fuse for cancer survival prediction with built-in explanations
ProtoPathway: Biologically Structured Prototype-Pathway Fusion for Multimodal Cancer Survival Prediction
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Embryology reframes cancer as developmental reversion
Charting an embryological path to cancer cure: A discussion of disease hallmarks
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Faecal metabolites link gut bacteria to muscle in aged hens
A putative model of the gut-muscle axis in aged livestock
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Fermented feed links gut microbes to muscle metabolites in old hens
A putative model of the gut-muscle axis in aged livestock
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3D model checks if cell division rules build plant symmetry
3D mechano-geometric multicellular model of apical stem cell-driven plant morphogenesis
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Senescent-immune niche sustains persistent breast lobules after menopause
A senescent-immune reserve niche model for incomplete lobular involution in the aging breast
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Incommensurable costs fix vascular branching exponents
The Incommensurability Principle in Biological Transport
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Graft-host coupling strength sets arrhythmia threshold
Modelling the electrophysiological interactions between human pluripotent cell-derived cardiomyocite grafts and host ventricular tissue
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Adhesion strength decides if tissues invade smoothly or fragment
Theory of adhesion-driven self-organisation in growing tissues
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Boundary attention boosts glomeruli segmentation accuracy
A deep learning framework for glomeruli segmentation with boundary attention
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Autoencoder replay lets fMRI models learn new sites without forgetting
Continual Learning for fMRI-Based Brain Disorder Diagnosis via Functional Connectivity Matrices Generative Replay
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Wave physics enforces Kleiber's 3/4 metabolic scaling
The Dynamic Origin of Kleiber's Law
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DIY insulin systems make patients the main cyber risk
Artificial Pancreas Implantables -- How Healthcare Professionals May Deal With DIY Bio Cases
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Predicted eye movements improve LLM radiology reports
Gaze2Report: Radiology Report Generation via Visual-Gaze Prompt Tuning of LLMs
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Hematocrit dictates where platelets gather on wavy vessel walls
Haematocrit and Shear Rate Modulate Local Cell-free Layer Thickness and Platelet Margination in Blood Flow Along a Sinusoidal Wall
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Long-time cell motion in tissues follows persistent Brownian dynamics
Universal Persistent Brownian Motions in Confluent Tissues
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Local cell adhesion changes dictate global embryo tissue topology
A dialog between cell adhesion and topology at the core of morphogenesis
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Toolbox extracts reproducible retinal vascular biomarkers
retinalysis-vascx: An explainable software toolbox for the extraction of retinal vascular biomarkers
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HGO and polynomial models fit tendon strains where neo-Hookean fails
Constitutive parameter inference using physics-based data-driven modeling in full volume datasets of intact and torn rotator cuff tendons
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Varicosities form serotonin reservoirs via diffusive coupling
Compartmental-reaction diffusion framework for microscale dynamics of extracellular serotonin in brain tissue
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One biaxial test recovers myocardial parameters with uncertainty
Unsupervised full-field Bayesian inference of orthotropic hyperelasticity from a single biaxial test: a myocardial case study
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Deep learning segments spinal rootlets on MRI with 0.62-0.67 Dice
Segmentation of spinal rootlets across MRI contrasts with RootletSeg
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MAE pretraining boosts SAM2 by 5% on retinal leakage segmentation
MAE-SAM2: Mask Autoencoder-Enhanced SAM2 for Clinical Retinal Vascular Leakage Segmentation
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Fluidised tissues close gaps by ejecting boundary cells into bulk
Elasticity and plasticity of epithelial gap closure
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Cells raise lateral tension to fix lumen shape in cysts
Control of lumen morphology by lateral and basal cell surfaces
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AI web app automates periorbital measurements for low-resource clinics
Glorbit: A Modular, Web-Based Platform for AI Based Periorbital Measurement in Low-Resource Settings
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Simulations show targeted-immuno combo best controls tumors
A stochastic agent-based model for simulating tumor-immune dynamics and evaluating therapeutic strategies
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Algorithm uncovers heart tissue models with just three parameters
Physics-Informed Symbolic Regression for Elasticity Modeling in Cardiac Digital Twins
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Differentiable logrank lets nets cluster cancer patients by survival
Unsupervised risk factor identification across cancer types and data modalities via explainable artificial intelligence
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Waddington vector field adds gene noise and cell signals to tissue models
Incorporating stochastic gene expression, signaling-mediated intercellular interactions, and regulated cell proliferation in models of coordinated tissue development
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Single pembrolizumab dose eradicates advanced MSI-H colorectal tumors
Optimisation of neoadjuvant pembrolizumab therapy for locally advanced MSI-H/dMMR colorectal cancer using data-driven delay integro-differential equations
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Curved epithelia bulge cells at defects via amplified forces
Cell bulging and extrusion in a three-dimensional bubbly vertex model for curved epithelial sheets
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Synthetic pairs cut medical-image learning error up to 5.6x
Synthetic Privileged Information Enhances Medical Image Representation Learning
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Routine slides learn from stains and transcriptomics seen only at training
TriDeNT: Triple Deep Network Training for Privileged Knowledge Distillation in Histopathology
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Rectal radiation doses tied to quality-of-life shifts in prostate treatment
A machine learning approach to using Quality-of-Life patient scores in guiding prostate radiation therapy dosing
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Phase-field model matches prostate cancer therapy outcomes
Mathematical analysis and simulation study of a phase-field model of prostate cancer growth with chemotherapy and antiangiogenic therapy effects
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Optimality conditions obtained for fractional tumor control
A distributed control problem for a fractional tumor growth model
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Basolateral fluids shape tissues by controlling hydration
Stay hydrated: Basolateral fluids shaping tissues
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Topology extracts features from tumour vessel networks
Topological Methods for Characterising Spatial Networks: A Case Study in Tumour Vasculature
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VAE clusters macular profiles into 14 spontaneous groups
retina-VAE: Variationally Decoding the Spectrum of Macular Disease
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Asymptotics reduce tissue growth to forced mean curvature flow
A tractable mathematical model for tissue growth
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Stem cell self-renewal fraction selects leukemia clones
A structured population model of clonal selection in acute leukemias with multiple maturation stages
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Integrative models explain skeletal shift from fins to limbs
Systems biology approach to the origin of the tetrapod limb
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DFT skin model identifies lipid-amino acid coupled vibrations
An Atomistic First-Principles Density Functional Theory Model for Single Layer Dry \textit{Stratum Corneum}
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Cell-scale ECM degradation at tumour edge alters invasion
Cell-scale degradation of peritumoural extracellular matrix fibre network and its role within tissue-scale cancer invasion
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Model links fibre redistribution to heterotypic cancer invasion
Multiscale dynamics of a heterotypic cancer cell population within a fibrous extracellular matrix